| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674706
Identifier: 147674706
GI number: 147674706
Start: 710895
End: 711494
Strand: Direct
Name: 147674706
Synonym: VC0395_A0686
Alternate gene names: NA
Gene position: 710895-711494 (Clockwise)
Preceding gene: 147675029
Following gene: 147675344
Centisome position: 23.51
GC content: 52.5
Gene sequence:
>600_bases ATGAGCACCGCACGCCCAGATTTTCAGTTAGATGGTTCAACGGTTTACGCGATACAAGAAACCGTCAACTACTTAAAGCC GATCCTTGAAAGCCTGTCGGAGCGTCATGTTGACAAGGTGCAAACTATTGAGCGCCACATTGGACGCTTCAATACACCTG CCGATGTAAAACGCTGGATTGCCTCGCGTGATGGGGGCATTCGCATTGCGGCGCTGAGCGTGGAGAGTTTTGAGCTTATC GGTGGCCGTTTGGTAGGCAATGTCAATATGGGGGCCTATGTGTTCACCACTGACGCGTGGGGCTATGCCAAAGACACGCG TGCCGAAGTGATCGTAAGCAAGTTAGTGCGTGCCATGGTCGCCAAGAACGCGCCGCCAACGGCTTACTCACGGGCGCAAA ACTTCCGCGCCAATAATCTTTACACCTCAGCGTTGGATGAACTTGGCCTAGCGCTTTGGACAGTGGAATGGTCACAGCAG TGGTATCTCGATGTGCCGATTGACCCAACCACATTAGACGATTTCATTACTTTCGGTTTACGTGGTGAGGTCGCCGAAGG CGCACCAGAAATCGAAGGTGAAGTGCAGTTACCGCAATAG
Upstream 100 bases:
>100_bases GCATGATGGATATTCCGCAACGTCAGTTCCTCGGCCTAAGCCGAGATAACCAAACCGAAGTCTACGATGTGATCGGTGAC TTCTGGCAAGAGGTACTGCA
Downstream 100 bases:
>100_bases AGGATTGCAAGCAATGGAACAAAACCAAATCAAAGTGAAGCCAGCCAAAGCCTCTGTGCCTGTGCGCAAAGAGAACGGCG AGTTTCTAAAGCAAGAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSTARPDFQLDGSTVYAIQETVNYLKPILESLSERHVDKVQTIERHIGRFNTPADVKRWIASRDGGIRIAALSVESFELI GGRLVGNVNMGAYVFTTDAWGYAKDTRAEVIVSKLVRAMVAKNAPPTAYSRAQNFRANNLYTSALDELGLALWTVEWSQQ WYLDVPIDPTTLDDFITFGLRGEVAEGAPEIEGEVQLPQ
Sequences:
>Translated_199_residues MSTARPDFQLDGSTVYAIQETVNYLKPILESLSERHVDKVQTIERHIGRFNTPADVKRWIASRDGGIRIAALSVESFELI GGRLVGNVNMGAYVFTTDAWGYAKDTRAEVIVSKLVRAMVAKNAPPTAYSRAQNFRANNLYTSALDELGLALWTVEWSQQ WYLDVPIDPTTLDDFITFGLRGEVAEGAPEIEGEVQLPQ >Mature_198_residues STARPDFQLDGSTVYAIQETVNYLKPILESLSERHVDKVQTIERHIGRFNTPADVKRWIASRDGGIRIAALSVESFELIG GRLVGNVNMGAYVFTTDAWGYAKDTRAEVIVSKLVRAMVAKNAPPTAYSRAQNFRANNLYTSALDELGLALWTVEWSQQW YLDVPIDPTTLDDFITFGLRGEVAEGAPEIEGEVQLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22150; Mature: 22019
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTARPDFQLDGSTVYAIQETVNYLKPILESLSERHVDKVQTIERHIGRFNTPADVKRWI CCCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ASRDGGIRIAALSVESFELIGGRLVGNVNMGAYVFTTDAWGYAKDTRAEVIVSKLVRAMV HCCCCCEEEEEEECHHHHHHCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH AKNAPPTAYSRAQNFRANNLYTSALDELGLALWTVEWSQQWYLDVPIDPTTLDDFITFGL HCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCEEEECCCCCCCHHHHHHHCC RGEVAEGAPEIEGEVQLPQ CCCCCCCCCCCCCCEECCC >Mature Secondary Structure STARPDFQLDGSTVYAIQETVNYLKPILESLSERHVDKVQTIERHIGRFNTPADVKRWI CCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ASRDGGIRIAALSVESFELIGGRLVGNVNMGAYVFTTDAWGYAKDTRAEVIVSKLVRAMV HCCCCCEEEEEEECHHHHHHCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH AKNAPPTAYSRAQNFRANNLYTSALDELGLALWTVEWSQQWYLDVPIDPTTLDDFITFGL HCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCEEEECCCCCCCHHHHHHHCC RGEVAEGAPEIEGEVQLPQ CCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA