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The map label for this gene is yjcC [C]

Identifier: 147674946

GI number: 147674946

Start: 844220

End: 846334

Strand: Direct

Name: yjcC [C]

Synonym: VC0395_A0832

Alternate gene names: 147674946

Gene position: 844220-846334 (Clockwise)

Preceding gene: 147673061

Following gene: 147673828

Centisome position: 27.92

GC content: 45.34

Gene sequence:

>2115_bases
TTGAGCCTCTTTAGCATGCTGAGTTTTAATAAGTACTTACCTACGGTGAGAAAAAATGAATTAACCAAGGTTTCTCAATA
CCTTGTTTCAGCGATGCATTCGATTCGTGAAGGGATGGTGTGGCTGATCCCGTGCTTAATGATCTCTTCCTTTGTCCTGT
TTATTGCCAGCATGGGCGAGCTGTTTAGCGGTGGCCGTCCTGAATGGGTTTTGATTTTGTATCGCGCGAACCAAGTGATC
GCCGAAACCTTTCCTTATTTGATGACGGCCACCATCTCATATCTGCTGGCCATGCATTGGCATTTGCCACGTCCCCCGAT
TGCGCTATTGAGCATCATTTATTTGGTGGTCTCCTCAGCTTCGGTGAGTGCCGAGAATAATTTGCCAACGTTTCAAATCA
TCACAGCACTGATCACACCGATTTATGCTATTCCGCTGATAGCTTGGTTGATGCGTTATCCGGTCTTACACTTAACCCAC
TCAAACAGTGCTGGCAGCATAGTACGTGAGTCACTCAATCTGGTGTTGCCTGCGGCACTGACGGCCATGGTTGTGGTGGG
CATAAATTTAATTTTATTTGGCCCGATCACTCGTCAGATCTTTGCAAGCTTGATGCATTTTGATTATGCCAATGACCCTT
ATTCCTTCGGCTTAACATTCGCCAGCCTAAACTCGCTGCTTTGGTTTTTCGGCATCCACGGTTATTACGCTTTATTACCT
TTAGTGGAATTATTGCAAGAAGCGAGTCGGCTGTCCGAGTCCTATTTTTTGATCGGTGAAACCGCCCCTTATCCAATGAA
TTTATCTTTTATGGGCACGTTTGTGTTTATCGGAGGCAGCGGTGCAACCTTTTCTTTAGCTTTAGCTATCCTATTGTTCG
GAAAACAGAAAAACATTCGCTTGCTCGCGATTGCCAGTCTTCCGATCGGGCTGATTAATGTGAATGAGATTTTCCTATTT
GGTTTGCCTCTGATCCTCAATCCGCGTTTATTCTTCCCCTTTCTCCTCGCACCTATGGTGAATGTGATGGTATCACTCTG
GGCGGTAGAGTCCGGTTGGGTCGCGTACCCGAGTGTTTCAGTGCCGTTCAATAGCCCGATTTTTCTCAATGCTTGGATTG
CGACTAGCGGTGACTGGAATGGATTACTCCTGCAATTGGTCAATATTGTTCTCGGTTGTCTCTTATATTTGCCCTCGGTG
CTGCGTCTTAATGAACAATATGGTCAGCAAACGATTCGAATTCCTTCGTTGGATACTATGTATACTCGCCGTCAAGAAGA
GGCGGCTCATCTGCAAGATGATCCCATTGCGTTGGCGCAGAAACGGGAGCGTGAGCAGCTTAAAGTTGAACAGCAACTAC
AGATGATGAGCAGCAAAGAGTTTTGTTTGGAGTATCAACCGCAAGTTTGCCACCGAACAGGACAAGTGATTGGTTGTGAG
GCATTAATTCGAGCCAAAGATCAACAAGATAACATACTATCACCGGCAGCCTTTTTACCTTCCCTTGCCAAAGCAGGGTT
GATGAAAGAGATGGATTTATGGGTGGTGAAACACGCTACGCGTGATGTTCGCAAGCTAACGGATGTCGGAGTTTATGTAC
CTGTCAGTATTAATCTGACGGCAGAAACCTTGATGAATTTGACCGTAATGGCTCAGATTGAAGAGATCATTCGCCCAGTG
GCAGGATTAATCCATATTGAGCTGACGGAAGAAAGTTTACTGGCGGATGAACAGCGTTTGACTTGGGTGTTTAATCAACT
CCATCAATTAGGTGTCAAAATTTACATTGATGATTTTGGTACTGGTTACTCTTCTCTCAGCTATCTGCACCGTTTTGATG
TCGATGGGATCAAGATTGATCGCTCTTTCGTGCTAGCTTTGGCCTCTGAAAAAGGGCGCAAAGTGTTTGCGAATTTACAG
CTCGTGGCTCATTCCCTTGAATTGGAAACGATCGTCGAAGGGGTCGAAACTCAAGAGCAATTAGAAGCGATGGGAGATGA
ATACCCTTTCTCAGTACAAGGCTGGTTTTACAGTAAATCTCTCACTCGTGAACATTTGGTGGAATTCGTGCAAGAACGTA
ATATGCTCAAAACAACCCCAGCTGAGGTGCAATAA

Upstream 100 bases:

>100_bases
TGGTTAGTCTTTTTTGAGAATAAGCAGTAAGTATAAGTTTTAACCGCTGAATCATTTATTGATAAAGAAATTAGTGTGCT
AAGTTTTTAATACGCGTCAC

Downstream 100 bases:

>100_bases
GCTCGTCAAATTGCTTGCCGATGAAAGGCAAAATCGCGTCTGCCACCGGTTTGAGTTGCTTGTCGATGTAGTGCTGATAA
TCCATCGGACTTTTGGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 704; Mature: 703

Protein sequence:

>704_residues
MSLFSMLSFNKYLPTVRKNELTKVSQYLVSAMHSIREGMVWLIPCLMISSFVLFIASMGELFSGGRPEWVLILYRANQVI
AETFPYLMTATISYLLAMHWHLPRPPIALLSIIYLVVSSASVSAENNLPTFQIITALITPIYAIPLIAWLMRYPVLHLTH
SNSAGSIVRESLNLVLPAALTAMVVVGINLILFGPITRQIFASLMHFDYANDPYSFGLTFASLNSLLWFFGIHGYYALLP
LVELLQEASRLSESYFLIGETAPYPMNLSFMGTFVFIGGSGATFSLALAILLFGKQKNIRLLAIASLPIGLINVNEIFLF
GLPLILNPRLFFPFLLAPMVNVMVSLWAVESGWVAYPSVSVPFNSPIFLNAWIATSGDWNGLLLQLVNIVLGCLLYLPSV
LRLNEQYGQQTIRIPSLDTMYTRRQEEAAHLQDDPIALAQKREREQLKVEQQLQMMSSKEFCLEYQPQVCHRTGQVIGCE
ALIRAKDQQDNILSPAAFLPSLAKAGLMKEMDLWVVKHATRDVRKLTDVGVYVPVSINLTAETLMNLTVMAQIEEIIRPV
AGLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLALASEKGRKVFANLQ
LVAHSLELETIVEGVETQEQLEAMGDEYPFSVQGWFYSKSLTREHLVEFVQERNMLKTTPAEVQ

Sequences:

>Translated_704_residues
MSLFSMLSFNKYLPTVRKNELTKVSQYLVSAMHSIREGMVWLIPCLMISSFVLFIASMGELFSGGRPEWVLILYRANQVI
AETFPYLMTATISYLLAMHWHLPRPPIALLSIIYLVVSSASVSAENNLPTFQIITALITPIYAIPLIAWLMRYPVLHLTH
SNSAGSIVRESLNLVLPAALTAMVVVGINLILFGPITRQIFASLMHFDYANDPYSFGLTFASLNSLLWFFGIHGYYALLP
LVELLQEASRLSESYFLIGETAPYPMNLSFMGTFVFIGGSGATFSLALAILLFGKQKNIRLLAIASLPIGLINVNEIFLF
GLPLILNPRLFFPFLLAPMVNVMVSLWAVESGWVAYPSVSVPFNSPIFLNAWIATSGDWNGLLLQLVNIVLGCLLYLPSV
LRLNEQYGQQTIRIPSLDTMYTRRQEEAAHLQDDPIALAQKREREQLKVEQQLQMMSSKEFCLEYQPQVCHRTGQVIGCE
ALIRAKDQQDNILSPAAFLPSLAKAGLMKEMDLWVVKHATRDVRKLTDVGVYVPVSINLTAETLMNLTVMAQIEEIIRPV
AGLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLALASEKGRKVFANLQ
LVAHSLELETIVEGVETQEQLEAMGDEYPFSVQGWFYSKSLTREHLVEFVQERNMLKTTPAEVQ
>Mature_703_residues
SLFSMLSFNKYLPTVRKNELTKVSQYLVSAMHSIREGMVWLIPCLMISSFVLFIASMGELFSGGRPEWVLILYRANQVIA
ETFPYLMTATISYLLAMHWHLPRPPIALLSIIYLVVSSASVSAENNLPTFQIITALITPIYAIPLIAWLMRYPVLHLTHS
NSAGSIVRESLNLVLPAALTAMVVVGINLILFGPITRQIFASLMHFDYANDPYSFGLTFASLNSLLWFFGIHGYYALLPL
VELLQEASRLSESYFLIGETAPYPMNLSFMGTFVFIGGSGATFSLALAILLFGKQKNIRLLAIASLPIGLINVNEIFLFG
LPLILNPRLFFPFLLAPMVNVMVSLWAVESGWVAYPSVSVPFNSPIFLNAWIATSGDWNGLLLQLVNIVLGCLLYLPSVL
RLNEQYGQQTIRIPSLDTMYTRRQEEAAHLQDDPIALAQKREREQLKVEQQLQMMSSKEFCLEYQPQVCHRTGQVIGCEA
LIRAKDQQDNILSPAAFLPSLAKAGLMKEMDLWVVKHATRDVRKLTDVGVYVPVSINLTAETLMNLTVMAQIEEIIRPVA
GLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLALASEKGRKVFANLQL
VAHSLELETIVEGVETQEQLEAMGDEYPFSVQGWFYSKSLTREHLVEFVQERNMLKTTPAEVQ

Specific function: Unknown

COG id: COG1455

COG function: function code G; Phosphotransferase system cellobiose-specific component IIC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1790496, Length=253, Percent_Identity=33.596837944664, Blast_Score=137, Evalue=3e-33,
Organism=Escherichia coli, GI87081743, Length=240, Percent_Identity=32.5, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1787541, Length=230, Percent_Identity=30, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI87081845, Length=253, Percent_Identity=31.2252964426877, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI87081921, Length=240, Percent_Identity=30.8333333333333, Blast_Score=114, Evalue=3e-26,
Organism=Escherichia coli, GI226510982, Length=275, Percent_Identity=27.6363636363636, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788502, Length=242, Percent_Identity=30.9917355371901, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1786507, Length=231, Percent_Identity=32.034632034632, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788032, Length=274, Percent_Identity=29.9270072992701, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI87081980, Length=231, Percent_Identity=29.4372294372294, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1788849, Length=251, Percent_Identity=27.4900398406374, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI87082096, Length=287, Percent_Identity=25.0871080139373, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787055, Length=232, Percent_Identity=26.2931034482759, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87082280, Length=147, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 79150; Mature: 79019

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS51105 PTS_EIIC_TYPE_3 ; PS50883 EAL ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSMLSFNKYLPTVRKNELTKVSQYLVSAMHSIREGMVWLIPCLMISSFVLFIASMGE
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSGGRPEWVLILYRANQVIAETFPYLMTATISYLLAMHWHLPRPPIALLSIIYLVVSSA
HHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
SVSAENNLPTFQIITALITPIYAIPLIAWLMRYPVLHLTHSNSAGSIVRESLNLVLPAAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH
TAMVVVGINLILFGPITRQIFASLMHFDYANDPYSFGLTFASLNSLLWFFGIHGYYALLP
HHHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVELLQEASRLSESYFLIGETAPYPMNLSFMGTFVFIGGSGATFSLALAILLFGKQKNIR
HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEE
LLAIASLPIGLINVNEIFLFGLPLILNPRLFFPFLLAPMVNVMVSLWAVESGWVAYPSVS
EEEEECCCEEEEEHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEE
VPFNSPIFLNAWIATSGDWNGLLLQLVNIVLGCLLYLPSVLRLNEQYGQQTIRIPSLDTM
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHH
YTRRQEEAAHLQDDPIALAQKREREQLKVEQQLQMMSSKEFCLEYQPQVCHRTGQVIGCE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCEEEHH
ALIRAKDQQDNILSPAAFLPSLAKAGLMKEMDLWVVKHATRDVRKLTDVGVYVPVSINLT
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEE
AETLMNLTVMAQIEEIIRPVAGLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFG
HHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
TGYSSLSYLHRFDVDGIKIDRSFVLALASEKGRKVFANLQLVAHSLELETIVEGVETQEQ
CCHHHHHHHHHCCCCCEEECHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LEAMGDEYPFSVQGWFYSKSLTREHLVEFVQERNMLKTTPAEVQ
HHHCCCCCCCEEECEEECHHCCHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
SLFSMLSFNKYLPTVRKNELTKVSQYLVSAMHSIREGMVWLIPCLMISSFVLFIASMGE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSGGRPEWVLILYRANQVIAETFPYLMTATISYLLAMHWHLPRPPIALLSIIYLVVSSA
HHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
SVSAENNLPTFQIITALITPIYAIPLIAWLMRYPVLHLTHSNSAGSIVRESLNLVLPAAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH
TAMVVVGINLILFGPITRQIFASLMHFDYANDPYSFGLTFASLNSLLWFFGIHGYYALLP
HHHHHHHHHHHEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVELLQEASRLSESYFLIGETAPYPMNLSFMGTFVFIGGSGATFSLALAILLFGKQKNIR
HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEE
LLAIASLPIGLINVNEIFLFGLPLILNPRLFFPFLLAPMVNVMVSLWAVESGWVAYPSVS
EEEEECCCEEEEEHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEE
VPFNSPIFLNAWIATSGDWNGLLLQLVNIVLGCLLYLPSVLRLNEQYGQQTIRIPSLDTM
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHH
YTRRQEEAAHLQDDPIALAQKREREQLKVEQQLQMMSSKEFCLEYQPQVCHRTGQVIGCE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHCCCEEEHH
ALIRAKDQQDNILSPAAFLPSLAKAGLMKEMDLWVVKHATRDVRKLTDVGVYVPVSINLT
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEE
AETLMNLTVMAQIEEIIRPVAGLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFG
HHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC
TGYSSLSYLHRFDVDGIKIDRSFVLALASEKGRKVFANLQLVAHSLELETIVEGVETQEQ
CCHHHHHHHHHCCCCCEEECHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LEAMGDEYPFSVQGWFYSKSLTREHLVEFVQERNMLKTTPAEVQ
HHHCCCCCCCEEECEEECHHCCHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]