| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673061
Identifier: 147673061
GI number: 147673061
Start: 843332
End: 844126
Strand: Direct
Name: 147673061
Synonym: VC0395_A0830
Alternate gene names: NA
Gene position: 843332-844126 (Clockwise)
Preceding gene: 147673040
Following gene: 147674946
Centisome position: 27.89
GC content: 49.81
Gene sequence:
>795_bases GTGCAAATTAAACGAGTATGGAGCGGTATGACTCTGCCGGTGATTGACCCCAAGCAACCTTTTCAACCTGAATATCAAAA TGCGATTGCCGATTTGGTGCGCTTTTGGCGCGCAGGGGCAGGGCAGGCATTACACAGCATTTACCTCTACGGCAGTGTGG CGCGAAAAACGGCCAAGCCGAATCGCTCCAACCTCGATGTCGTGGTAGTGACCTATGGCTCTTTTGAAGAAAACCGCGCG ACCTTAATCAACACCATCCGTTGGCGTTTTCAAAAAAGCTACCCGTGGATCACCGATGTCTCCTTTAAGATCGCAGCCGT TGAGGAAGTGGCGACCTTAGAGGCGATTTTTTCTTGGGGTTTCATGCTGCGCCACTGCTGTGTTTGTGTGTATGGCGATA ATCTGGCCGAATGTTTTGGCCATTACGAGCCAAGCTGGGAAATTGCTAAGCATTGGAATATGGATGTGGGGGATTGGCTT GCCTATTACCGAGATAAAATTGCCAAAGCCGCAACCGAGCAAGAACAGATCATGGCTCAGCAGATGGTGGCCAAAAAGCT ACTGCGTGCCAGCTATTCGCTGATTATGTACCGCGACAAGCAGTGGTTTGATGACCCGATCGAATGCGGTACCCATTTCC TACGCTATCACCCAGAGAAGCAGCTTGAAATTGACCGCCTTGGCTTGCTACTAAAACCCCGTGCAATTCCCAAACGCTCG GTGGTTGGTTTACTCGATAGTTTTGGCCCTTGGCTGGTGTCTCAATATCAAAAAACCGAGTTTCGAATTGGTTAG
Upstream 100 bases:
>100_bases GTGCACCGTGGCTAAGAATTAAGGTTTGACTGGTTGATTGCTCGCCAGTGGGGTAAGTCTACTATTGATTGATGGTCACG CATCATAGAACATAAGGCCT
Downstream 100 bases:
>100_bases TCTTTTTTGAGAATAAGCAGTAAGTATAAGTTTTAACCGCTGAATCATTTATTGATAAAGAAATTAGTGTGCTAAGTTTT TAATACGCGTCACTTGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MQIKRVWSGMTLPVIDPKQPFQPEYQNAIADLVRFWRAGAGQALHSIYLYGSVARKTAKPNRSNLDVVVVTYGSFEENRA TLINTIRWRFQKSYPWITDVSFKIAAVEEVATLEAIFSWGFMLRHCCVCVYGDNLAECFGHYEPSWEIAKHWNMDVGDWL AYYRDKIAKAATEQEQIMAQQMVAKKLLRASYSLIMYRDKQWFDDPIECGTHFLRYHPEKQLEIDRLGLLLKPRAIPKRS VVGLLDSFGPWLVSQYQKTEFRIG
Sequences:
>Translated_264_residues MQIKRVWSGMTLPVIDPKQPFQPEYQNAIADLVRFWRAGAGQALHSIYLYGSVARKTAKPNRSNLDVVVVTYGSFEENRA TLINTIRWRFQKSYPWITDVSFKIAAVEEVATLEAIFSWGFMLRHCCVCVYGDNLAECFGHYEPSWEIAKHWNMDVGDWL AYYRDKIAKAATEQEQIMAQQMVAKKLLRASYSLIMYRDKQWFDDPIECGTHFLRYHPEKQLEIDRLGLLLKPRAIPKRS VVGLLDSFGPWLVSQYQKTEFRIG >Mature_264_residues MQIKRVWSGMTLPVIDPKQPFQPEYQNAIADLVRFWRAGAGQALHSIYLYGSVARKTAKPNRSNLDVVVVTYGSFEENRA TLINTIRWRFQKSYPWITDVSFKIAAVEEVATLEAIFSWGFMLRHCCVCVYGDNLAECFGHYEPSWEIAKHWNMDVGDWL AYYRDKIAKAATEQEQIMAQQMVAKKLLRASYSLIMYRDKQWFDDPIECGTHFLRYHPEKQLEIDRLGLLLKPRAIPKRS VVGLLDSFGPWLVSQYQKTEFRIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30712; Mature: 30712
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKRVWSGMTLPVIDPKQPFQPEYQNAIADLVRFWRAGAGQALHSIYLYGSVARKTAKP CCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC NRSNLDVVVVTYGSFEENRATLINTIRWRFQKSYPWITDVSFKIAAVEEVATLEAIFSWG CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHH FMLRHCCVCVYGDNLAECFGHYEPSWEIAKHWNMDVGDWLAYYRDKIAKAATEQEQIMAQ HHHHHHEEHHCCCCHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QMVAKKLLRASYSLIMYRDKQWFDDPIECGTHFLRYHPEKQLEIDRLGLLLKPRAIPKRS HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCHHCCHHHHCEEECCCCCCHHH VVGLLDSFGPWLVSQYQKTEFRIG HHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MQIKRVWSGMTLPVIDPKQPFQPEYQNAIADLVRFWRAGAGQALHSIYLYGSVARKTAKP CCCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC NRSNLDVVVVTYGSFEENRATLINTIRWRFQKSYPWITDVSFKIAAVEEVATLEAIFSWG CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHH FMLRHCCVCVYGDNLAECFGHYEPSWEIAKHWNMDVGDWLAYYRDKIAKAATEQEQIMAQ HHHHHHEEHHCCCCHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QMVAKKLLRASYSLIMYRDKQWFDDPIECGTHFLRYHPEKQLEIDRLGLLLKPRAIPKRS HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCHHCCHHHHCEEECCCCCCHHH VVGLLDSFGPWLVSQYQKTEFRIG HHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA