| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is cdsA [H]
Identifier: 147674661
GI number: 147674661
Start: 1964526
End: 1965368
Strand: Reverse
Name: cdsA [H]
Synonym: VC0395_A1846
Alternate gene names: 147674661
Gene position: 1965368-1964526 (Counterclockwise)
Preceding gene: 147675134
Following gene: 147674244
Centisome position: 64.99
GC content: 48.16
Gene sequence:
>843_bases TTGAAGCAGCGAATCATTACAGCGCTTATTCTGGCGCCTTTGGTGATCCTTGGCATCCTTTATCTGCCTTTTGCTTGGTT TATGTTGGCACTCGCAGTAGTGACCTTACTCGGATTCTGGGAATGGACTCAGTTCGTTAACCAACCATCACGCATGTTAG CCATGATTCCCGCCTTATTGGTTGGTGGTATCAGTGTCGCTTTGATCGACTTTCAATTTCCGGCTATCAGCAATATGAAT ACGGCGCATTTTATTGTGCTGGGTATCGGTAGCCTTTGGTGGCTCGTCTCAAGTGGACTGGCGATCACTTATCCGCGCTC GCGTCCATTATGGGAGCACTCCAGCACTGTTCGCCACCTGTTTGGCCTATTTACGCTGCTGCCTTTCTTTTGGAGTGTGT TGTTCTTACGCGCCGATACTTACCTTTCCGATCCTCTTTATGGTGCGAAATTAGTTCTCTTCGTCTGTTTTCTGGTCTGG GCCGCAGACAGCGGTGCCTATTTTGTGGGAAAAAGCTTAGGTAAACACAAAATGGCGCCCGCAGTCAGCCCGAATAAAAC GATAGAAGGTTTGGTCGGTGGCATCGTCACCGCCATGCTGGTTGGTTATTGGGTAGCAGAGTGCTTTGGTATTCAATTTA GCTCTATGCCTGTCATGCTGCTGATCATCTTATTGACTGTGGTAATTTCGGTTTTAGGGGATTTGGTCGAGAGCATGTTT AAACGTGTTTCTGGGATCAAAGACAGCAGCAATATCATTCCTGGGCACGGCGGCATTCTGGATCGGATTGATAGCCTAAC GGCCGCTTTCCCTGTGTTCGCTCTTCTCTATTTCTTGTTCTAG
Upstream 100 bases:
>100_bases TTGAAGCAGTGACTTGGTTTGTTAATCGTGAGCGCCGTTTTGGCTGTACTGGTGAACAAGTCAAGGCATTGATGGAAAAC TGAATATAGGACTTCTCAAT
Downstream 100 bases:
>100_bases TACTCAGGCTGCTTAGGCAGCCTGATGTGAATAACAGCGATCTTCACTATGCGTAAACTAACCATTTTAGGTGCCACAGG TTCGATAGGAGCCAGCACCC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKQRIITALILAPLVILGILYLPFAWFMLALAVVTLLGFWEWTQFVNQPSRMLAMIPALLVGGISVALIDFQFPAISNMN TAHFIVLGIGSLWWLVSSGLAITYPRSRPLWEHSSTVRHLFGLFTLLPFFWSVLFLRADTYLSDPLYGAKLVLFVCFLVW AADSGAYFVGKSLGKHKMAPAVSPNKTIEGLVGGIVTAMLVGYWVAECFGIQFSSMPVMLLIILLTVVISVLGDLVESMF KRVSGIKDSSNIIPGHGGILDRIDSLTAAFPVFALLYFLF
Sequences:
>Translated_280_residues MKQRIITALILAPLVILGILYLPFAWFMLALAVVTLLGFWEWTQFVNQPSRMLAMIPALLVGGISVALIDFQFPAISNMN TAHFIVLGIGSLWWLVSSGLAITYPRSRPLWEHSSTVRHLFGLFTLLPFFWSVLFLRADTYLSDPLYGAKLVLFVCFLVW AADSGAYFVGKSLGKHKMAPAVSPNKTIEGLVGGIVTAMLVGYWVAECFGIQFSSMPVMLLIILLTVVISVLGDLVESMF KRVSGIKDSSNIIPGHGGILDRIDSLTAAFPVFALLYFLF >Mature_280_residues MKQRIITALILAPLVILGILYLPFAWFMLALAVVTLLGFWEWTQFVNQPSRMLAMIPALLVGGISVALIDFQFPAISNMN TAHFIVLGIGSLWWLVSSGLAITYPRSRPLWEHSSTVRHLFGLFTLLPFFWSVLFLRADTYLSDPLYGAKLVLFVCFLVW AADSGAYFVGKSLGKHKMAPAVSPNKTIEGLVGGIVTAMLVGYWVAECFGIQFSSMPVMLLIILLTVVISVLGDLVESMF KRVSGIKDSSNIIPGHGGILDRIDSLTAAFPVFALLYFLF
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=283, Percent_Identity=44.1696113074205, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1787677, Length=113, Percent_Identity=41.5929203539823, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 30868; Mature: 30868
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRIITALILAPLVILGILYLPFAWFMLALAVVTLLGFWEWTQFVNQPSRMLAMIPALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VGGISVALIDFQFPAISNMNTAHFIVLGIGSLWWLVSSGLAITYPRSRPLWEHSSTVRHL HCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHH FGLFTLLPFFWSVLFLRADTYLSDPLYGAKLVLFVCFLVWAADSGAYFVGKSLGKHKMAP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCC AVSPNKTIEGLVGGIVTAMLVGYWVAECFGIQFSSMPVMLLIILLTVVISVLGDLVESMF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KRVSGIKDSSNIIPGHGGILDRIDSLTAAFPVFALLYFLF HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKQRIITALILAPLVILGILYLPFAWFMLALAVVTLLGFWEWTQFVNQPSRMLAMIPALL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH VGGISVALIDFQFPAISNMNTAHFIVLGIGSLWWLVSSGLAITYPRSRPLWEHSSTVRHL HCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHH FGLFTLLPFFWSVLFLRADTYLSDPLYGAKLVLFVCFLVWAADSGAYFVGKSLGKHKMAP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCC AVSPNKTIEGLVGGIVTAMLVGYWVAECFGIQFSSMPVMLLIILLTVVISVLGDLVESMF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KRVSGIKDSSNIIPGHGGILDRIDSLTAAFPVFALLYFLF HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]