| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is iaaA [H]
Identifier: 147674447
GI number: 147674447
Start: 2326656
End: 2327636
Strand: Reverse
Name: iaaA [H]
Synonym: VC0395_A2181
Alternate gene names: 147674447
Gene position: 2327636-2326656 (Counterclockwise)
Preceding gene: 147674781
Following gene: 147673842
Centisome position: 76.97
GC content: 52.5
Gene sequence:
>981_bases ATGACACAGCCTTTTGCGATTGCCATCCATGGCGGTGCCGGCACGATTTTGCGTGAGCAGATGAGTGATGCATTGCGCAT GGACATCCTCGCGACTTTAGAGCAAGCCGTGCGAGCCGGGCATCAGCTACTGGTTGAAGGAGCCGATGCCTTAGATGCGG TGGTGGCAGCGGTGACAGTATTGGAAGACTCGCCACTGTTTAATGCCGGCAAAGGCTCAGTACTGACGCACAATGAAATG GTGGAGATGGATGCCTCGGTGATGCATGGCGCAGCCCGAGAGGCTGGCGCGATTGCGGGTGTGCGTCATGTTCGCAACCC AATTCAACTCGCGCGCGATGTGCTGCGTCATAGTGATCATGTGTTTTTGATTGGTGATGGGGCGGAGCAATTTGCTTTCC TGCAAGGGCATGTTTATACCGAGCAAGACTATTTTTTCACTGAGCGCCGTTATGAACAGCTGCAAAACATGAAGCAGCAA GATCGCTTTGCACTTTCAGAAGCTTCCTATCAATCAGAGTCTGCTGAACAAGAGCCGCCAAGTGAATATCCCGATGATAA GAAATTTGGCACGGTAGGCGCGGTGGCGCTGGATCAACAGGGCAATTTGGCGGCGGCGACCAGTACGGGTGGGATCACCA ATAAACGCTTTGGTCGCGTGGGCGACTCGCCAATCATCGGCGCTGGAACGCTGGCTGAAAATGGCAATGTCGCCATTTCA TGCACTGGAATGGGCGAGTACTTCATCCGTTATGCGGTCGCAGGCGATATTGCAGCACGCATGCGTTATCTCAAAGAAGA TGTCCATATCGCCTGTGAAACCGTGGTACAAGGTGAACTGAAAAGTGTAGGTGGTGAAGGGGGATTAATTGCGATTGATG CGCAGGGCGATCTTCACTTTGCCATGAACAGTTCTGGCATGTATCGCGCGGGGATTGATCGCCATGGTCAATTCAGTGTG AAAATTTACGCTGACGAATAA
Upstream 100 bases:
>100_bases ACCGCGATCCGGTTAGCGCTTTTTTATTGCGAACTTTGGCACTATACGCCCATTCTAAACGCCGAAATGAAACGGTTAAC CTTATTGGAGAACACAAGTC
Downstream 100 bases:
>100_bases CCTTTTCTTAATAACTGAATGGATTTTCAAAGCCGTTTTATATGAATTTTTCATGCTTAAAAAATGACTGCAAGGATTCA AATTCGGTGCTAGAATCCTT
Product: putative asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTQPFAIAIHGGAGTILREQMSDALRMDILATLEQAVRAGHQLLVEGADALDAVVAAVTVLEDSPLFNAGKGSVLTHNEM VEMDASVMHGAAREAGAIAGVRHVRNPIQLARDVLRHSDHVFLIGDGAEQFAFLQGHVYTEQDYFFTERRYEQLQNMKQQ DRFALSEASYQSESAEQEPPSEYPDDKKFGTVGAVALDQQGNLAAATSTGGITNKRFGRVGDSPIIGAGTLAENGNVAIS CTGMGEYFIRYAVAGDIAARMRYLKEDVHIACETVVQGELKSVGGEGGLIAIDAQGDLHFAMNSSGMYRAGIDRHGQFSV KIYADE
Sequences:
>Translated_326_residues MTQPFAIAIHGGAGTILREQMSDALRMDILATLEQAVRAGHQLLVEGADALDAVVAAVTVLEDSPLFNAGKGSVLTHNEM VEMDASVMHGAAREAGAIAGVRHVRNPIQLARDVLRHSDHVFLIGDGAEQFAFLQGHVYTEQDYFFTERRYEQLQNMKQQ DRFALSEASYQSESAEQEPPSEYPDDKKFGTVGAVALDQQGNLAAATSTGGITNKRFGRVGDSPIIGAGTLAENGNVAIS CTGMGEYFIRYAVAGDIAARMRYLKEDVHIACETVVQGELKSVGGEGGLIAIDAQGDLHFAMNSSGMYRAGIDRHGQFSV KIYADE >Mature_325_residues TQPFAIAIHGGAGTILREQMSDALRMDILATLEQAVRAGHQLLVEGADALDAVVAAVTVLEDSPLFNAGKGSVLTHNEMV EMDASVMHGAAREAGAIAGVRHVRNPIQLARDVLRHSDHVFLIGDGAEQFAFLQGHVYTEQDYFFTERRYEQLQNMKQQD RFALSEASYQSESAEQEPPSEYPDDKKFGTVGAVALDQQGNLAAATSTGGITNKRFGRVGDSPIIGAGTLAENGNVAISC TGMGEYFIRYAVAGDIAARMRYLKEDVHIACETVVQGELKSVGGEGGLIAIDAQGDLHFAMNSSGMYRAGIDRHGQFSVK IYADE
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=316, Percent_Identity=39.2405063291139, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI145275200, Length=316, Percent_Identity=39.2405063291139, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI98991769, Length=298, Percent_Identity=29.8657718120805, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI285002251, Length=308, Percent_Identity=28.8961038961039, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI285002253, Length=308, Percent_Identity=26.9480519480519, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1787050, Length=304, Percent_Identity=49.671052631579, Blast_Score=273, Evalue=2e-74, Organism=Drosophila melanogaster, GI18921183, Length=318, Percent_Identity=35.8490566037736, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI21357893, Length=268, Percent_Identity=31.7164179104478, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24655553, Length=185, Percent_Identity=31.3513513513514, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24657358, Length=315, Percent_Identity=25.3968253968254, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 35054; Mature: 34923
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPFAIAIHGGAGTILREQMSDALRMDILATLEQAVRAGHQLLVEGADALDAVVAAVTV CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHH LEDSPLFNAGKGSVLTHNEMVEMDASVMHGAAREAGAIAGVRHVRNPIQLARDVLRHSDH HCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VFLIGDGAEQFAFLQGHVYTEQDYFFTERRYEQLQNMKQQDRFALSEASYQSESAEQEPP EEEEECCHHHEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SEYPDDKKFGTVGAVALDQQGNLAAATSTGGITNKRFGRVGDSPIIGAGTLAENGNVAIS CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEECCCCCEEEE CTGMGEYFIRYAVAGDIAARMRYLKEDVHIACETVVQGELKSVGGEGGLIAIDAQGDLHF EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE AMNSSGMYRAGIDRHGQFSVKIYADE EECCCCCEEECCCCCCEEEEEEEECC >Mature Secondary Structure TQPFAIAIHGGAGTILREQMSDALRMDILATLEQAVRAGHQLLVEGADALDAVVAAVTV CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHH LEDSPLFNAGKGSVLTHNEMVEMDASVMHGAAREAGAIAGVRHVRNPIQLARDVLRHSDH HCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VFLIGDGAEQFAFLQGHVYTEQDYFFTERRYEQLQNMKQQDRFALSEASYQSESAEQEPP EEEEECCHHHEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SEYPDDKKFGTVGAVALDQQGNLAAATSTGGITNKRFGRVGDSPIIGAGTLAENGNVAIS CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEECCCCCEEEE CTGMGEYFIRYAVAGDIAARMRYLKEDVHIACETVVQGELKSVGGEGGLIAIDAQGDLHF EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE AMNSSGMYRAGIDRHGQFSVKIYADE EECCCCCEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]