| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147674196
Identifier: 147674196
GI number: 147674196
Start: 1241125
End: 1241946
Strand: Reverse
Name: 147674196
Synonym: VC0395_A1181
Alternate gene names: NA
Gene position: 1241946-1241125 (Counterclockwise)
Preceding gene: 147674686
Following gene: 147674593
Centisome position: 41.07
GC content: 46.84
Gene sequence:
>822_bases GTGCGTATTTTTTGGTTAAAAGCGTTAACCTCAGGTTTATTTTATTTACCACTGTCGATAAAAAATGGTTTATGCCGCCT CGTGGCTAAGCCGATAAGTCGGAAAAAAATGGCAGCGGCTTTAACGCAACTTAATTACGCGTTACCTGATTTGAGTGACG TAAAAAAGCAGGCGATTGTTGAGCAATCCACGCGCTTATCATTGAAGAATTTACTCGGGTTTTGCCATCTTAAGCGTTAC CAATATCAAGTTGAACAGCCTGACTTGGTTCAAGAGATCCTAGATAACCAAGGCGGCGGTATTATCGTTTGTCCCCATAT GGGCGTTTACGATGGGGTGACTTGGTGGCTTAACCAGCAAGGTAAAAAAGCCGTCACTATTTTTGGGGCGGGCAGCTCAG GCGATCGTCCAGATGAAAATGCCATGATCTCCCAAGCTGCGAAATTAGCCAGAGTTCCCTATCTGCTACGCAAACAAAAC TTGATGTTGGAGTTAGCACAGCGGATCAAACAAGGTGAATGGGTGGTGTTACATATGGATATGCGCACTGAAGGTGTGCC TGTTCGTTGGTTTGGGCAAGCCACACAATTGTCGGCAACGCCTTTTTTCCTTGCGCATAAACTCGCATGCCCGATCTATT TTCATTATGCGCTCAGTGAGGGAATGACGCAGAGACTGCATTTCTCGCGCTTTGCCTTGCACCAAACCGATGACTTAAGT CGCAATATTGCGCAGGATGCGCAGCAGTTAGCCGACATGATGCAGCAAGCGATCACCGCGCATCCCGAGCAGTGGATCTG GCTTTATCGGCGTTTTAAGTAA
Upstream 100 bases:
>100_bases CAGTTTTCGGCACAAATTAATCTATTTGATATGCCATTAACCATGGAATCGTCAGTCAATGAAGTCATTGATTGGTTAGT GAGCGAAGTAGGGGAATAAC
Downstream 100 bases:
>100_bases AAGCAATTCGGTGTATCTAAGAAGTTGATGTGGATGATTGAGCGCCACGCGCGATTCGCTGATTCATCACACAAACAGCC TCGATAATCCCTTGACCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRIFWLKALTSGLFYLPLSIKNGLCRLVAKPISRKKMAAALTQLNYALPDLSDVKKQAIVEQSTRLSLKNLLGFCHLKRY QYQVEQPDLVQEILDNQGGGIIVCPHMGVYDGVTWWLNQQGKKAVTIFGAGSSGDRPDENAMISQAAKLARVPYLLRKQN LMLELAQRIKQGEWVVLHMDMRTEGVPVRWFGQATQLSATPFFLAHKLACPIYFHYALSEGMTQRLHFSRFALHQTDDLS RNIAQDAQQLADMMQQAITAHPEQWIWLYRRFK
Sequences:
>Translated_273_residues MRIFWLKALTSGLFYLPLSIKNGLCRLVAKPISRKKMAAALTQLNYALPDLSDVKKQAIVEQSTRLSLKNLLGFCHLKRY QYQVEQPDLVQEILDNQGGGIIVCPHMGVYDGVTWWLNQQGKKAVTIFGAGSSGDRPDENAMISQAAKLARVPYLLRKQN LMLELAQRIKQGEWVVLHMDMRTEGVPVRWFGQATQLSATPFFLAHKLACPIYFHYALSEGMTQRLHFSRFALHQTDDLS RNIAQDAQQLADMMQQAITAHPEQWIWLYRRFK >Mature_273_residues MRIFWLKALTSGLFYLPLSIKNGLCRLVAKPISRKKMAAALTQLNYALPDLSDVKKQAIVEQSTRLSLKNLLGFCHLKRY QYQVEQPDLVQEILDNQGGGIIVCPHMGVYDGVTWWLNQQGKKAVTIFGAGSSGDRPDENAMISQAAKLARVPYLLRKQN LMLELAQRIKQGEWVVLHMDMRTEGVPVRWFGQATQLSATPFFLAHKLACPIYFHYALSEGMTQRLHFSRFALHQTDDLS RNIAQDAQQLADMMQQAITAHPEQWIWLYRRFK
Specific function: Unknown
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31247; Mature: 31247
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFWLKALTSGLFYLPLSIKNGLCRLVAKPISRKKMAAALTQLNYALPDLSDVKKQAIV CEEEEEEHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EQSTRLSLKNLLGFCHLKRYQYQVEQPDLVQEILDNQGGGIIVCPHMGVYDGVTWWLNQQ HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHEECCC GKKAVTIFGAGSSGDRPDENAMISQAAKLARVPYLLRKQNLMLELAQRIKQGEWVVLHMD CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE MRTEGVPVRWFGQATQLSATPFFLAHKLACPIYFHYALSEGMTQRLHFSRFALHQTDDLS CCCCCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RNIAQDAQQLADMMQQAITAHPEQWIWLYRRFK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MRIFWLKALTSGLFYLPLSIKNGLCRLVAKPISRKKMAAALTQLNYALPDLSDVKKQAIV CEEEEEEHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH EQSTRLSLKNLLGFCHLKRYQYQVEQPDLVQEILDNQGGGIIVCPHMGVYDGVTWWLNQQ HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHEECCC GKKAVTIFGAGSSGDRPDENAMISQAAKLARVPYLLRKQNLMLELAQRIKQGEWVVLHMD CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE MRTEGVPVRWFGQATQLSATPFFLAHKLACPIYFHYALSEGMTQRLHFSRFALHQTDDLS CCCCCCCEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RNIAQDAQQLADMMQQAITAHPEQWIWLYRRFK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA