| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is dltA [H]
Identifier: 147674686
GI number: 147674686
Start: 1242119
End: 1243789
Strand: Reverse
Name: dltA [H]
Synonym: VC0395_A1182
Alternate gene names: 147674686
Gene position: 1243789-1242119 (Counterclockwise)
Preceding gene: 147675267
Following gene: 147674196
Centisome position: 41.13
GC content: 45.84
Gene sequence:
>1671_bases ATGCCATACAATTCTGCGACAGATTTGTTACAGAGAGAGGGTTATGGTGTCGTGCATAACCAATTTATCAATAACATGGC GATGTACTGCGAGACAAGACACTCTATTTTGGCGGCTATTCAGGCTAACCGACATGCCCCTGCATTATGGGTTAAACAGA AAACCTACACCTATCAAGAGATGACCGATATGGCACTCTCATTGAGTGACTATTGGCATTTACAGGGCGTGCAGCGAGTT GCGATCCTTTCGGTGCGCGATCTCGCGGCTTATTCTGCGATATGGGCGAGCTATTTGGGCGGTATGACTTATATTCCGCT CAATGCGCGAGCAACAACAGAACAGATCCAAGAGACGCTGATCGCGACACAATGTGATTCCATCATGGTAGACGCGCAGC AATTGAGTCGTTTGTCCTCCTTACTAGAGACTTGCATTGACCGATTACACATTTATGCACTGCCTGATGTGGATGTGGAA CCGTTACGTCAGCAATATCCTCAGCACACTTTTCACACAGTGCAAATAACCGAACAAGATGTGGAATTACTGGTAGTGAA ATACCATTTAGACAATGAACATGAGTACGCTTATATCATGCAAACCTCAGGTTCGACTGGTAAACCCAAACGTATTGCGG TCAGCTACAGTAATTTGCATTGCTATATCAGTCAAATTGACAAACTATTTCCACTCAATGCGCAAGATCGAGTGGGGCAA TATTCTGATTTGACTTTTGATCTTTCGGTACATGATATTTTTTACAGTTTGATCTCTGGTGCTTGTTTATATGTTGTGCC TGAATTGGCGAAATTAAGTCCAGCAGAATTTATTCGTCACCATCAATTAACGGTATGGCTTTCTGTGCCTACTGTTATTG AGTTGGCCCTACAAAGACAAACCTTAACCCCACACAGTTTACCTTCTCTGCGACTGAGTTTTTTCTGCGGACAAGCCTTG CTGCATGATTTAGCCGAACAATGGCAACAGGCCACCCAGCAGCCGGTGATCAATCTGTATGGTCCAACAGAGTGCACGAT TGCCGTTACCTATCATCGATTTGTCGCCCATTCAGGTATGGCATCGGTGCCGATTGGTCGTGCTTTTGAAGAGGAGTGTT TAGCCATCATCAACGAACAAGGCGAGTTGATGCGCTTTGAATCTGCACCCGAGGGGTATCGCGGAGAATTACTTCTGTCG GGCAAACAGTTAGTGAAGGGTTATCTGAATGATCCGCTGAATACGCAAAGTGCCTTTTTCCAGCACGAAGGGCGTCTTTG GTGTCGTTCAGGTGACATTGTCACTAAATCAAATGGCGTGCTGATTCATCTTGGGCGCCGCGATCACCAAGTGAAAATTG CCGGACAACGGGTGGAATTAGAAGAGATTGAAACCGTTGTTCGCCGCGTGACTCAAGCGCACAGCGTGGCGATTGTGCCT TGGCCTTTAAGTGAGTCGGGCTATGCCAGCGGCACGGTGGCGTTTGTGGATACCCATACCCAATGGCAACCAGATCTGTG GTTGAGCCAATGCAAACAACAATTAAATCCGACTTTTGTGCCTAAGCGTTGGTATGCCATTGAACAATTACCAAGAAATG CCAATGGCAAAACCGATATTAAAGCTTTACAACAACAATTAGCGAGTCAGACATATGAAACAAGCCATTGA
Upstream 100 bases:
>100_bases TGATATGTCTATTGTCAATCGGTTGCTCGACAACTAGTTGCAATTATAGGTTGTAGACCTTCGCGCCATAGAAAGGAGGC CGGGCGCTCGGTAGCTGACA
Downstream 100 bases:
>100_bases AAATATCCTTATTGAGCGATTACAAACCAGTATTGAGGGTATTTCATCGATATTGTCGCCAAAGTAGAAAGCCAGTTTTC GGCACAAATTAATCTATTTG
Product: enterobactin synthetase component F-related protein
Products: NA
Alternate protein names: D-alanine-D-alanyl carrier protein ligase; DCL; D-alanine-activating enzyme; DAE [H]
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MPYNSATDLLQREGYGVVHNQFINNMAMYCETRHSILAAIQANRHAPALWVKQKTYTYQEMTDMALSLSDYWHLQGVQRV AILSVRDLAAYSAIWASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVE PLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQ YSDLTFDLSVHDIFYSLISGACLYVVPELAKLSPAEFIRHHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQAL LHDLAEQWQQATQQPVINLYGPTECTIAVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLS GKQLVKGYLNDPLNTQSAFFQHEGRLWCRSGDIVTKSNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVP WPLSESGYASGTVAFVDTHTQWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKALQQQLASQTYETSH
Sequences:
>Translated_556_residues MPYNSATDLLQREGYGVVHNQFINNMAMYCETRHSILAAIQANRHAPALWVKQKTYTYQEMTDMALSLSDYWHLQGVQRV AILSVRDLAAYSAIWASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVE PLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQ YSDLTFDLSVHDIFYSLISGACLYVVPELAKLSPAEFIRHHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQAL LHDLAEQWQQATQQPVINLYGPTECTIAVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLS GKQLVKGYLNDPLNTQSAFFQHEGRLWCRSGDIVTKSNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVP WPLSESGYASGTVAFVDTHTQWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKALQQQLASQTYETSH >Mature_555_residues PYNSATDLLQREGYGVVHNQFINNMAMYCETRHSILAAIQANRHAPALWVKQKTYTYQEMTDMALSLSDYWHLQGVQRVA ILSVRDLAAYSAIWASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEP LRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQY SDLTFDLSVHDIFYSLISGACLYVVPELAKLSPAEFIRHHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALL HDLAEQWQQATQQPVINLYGPTECTIAVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLSG KQLVKGYLNDPLNTQSAFFQHEGRLWCRSGDIVTKSNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVPW PLSESGYASGTVAFVDTHTQWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKALQQQLASQTYETSH
Specific function: Involved in the biosynthesis of D-alanyl-lipoteichoic acid (LTA). Catalyzes an ATP-dependent two-step reaction where it forms a high energy D-alanyl AMP intermediate and transfers the alanyl residues from AMP to Dcp [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. DltA subfamily [H]
Homologues:
Organism=Homo sapiens, GI45580730, Length=527, Percent_Identity=25.0474383301708, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI187761345, Length=532, Percent_Identity=23.8721804511278, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI187761343, Length=532, Percent_Identity=23.8721804511278, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI157311624, Length=538, Percent_Identity=20.631970260223, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI157311622, Length=538, Percent_Identity=20.631970260223, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI58082049, Length=541, Percent_Identity=21.0720887245841, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI42544132, Length=527, Percent_Identity=21.4421252371917, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI38505220, Length=361, Percent_Identity=19.9445983379501, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI1786801, Length=542, Percent_Identity=30.2583025830258, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788107, Length=539, Percent_Identity=22.0779220779221, Blast_Score=92, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17556356, Length=380, Percent_Identity=26.5789473684211, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI32564420, Length=358, Percent_Identity=24.3016759776536, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI32564422, Length=358, Percent_Identity=24.3016759776536, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319591, Length=412, Percent_Identity=27.1844660194175, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319699, Length=373, Percent_Identity=21.71581769437, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24648676, Length=391, Percent_Identity=26.3427109974425, Blast_Score=93, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010072 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.1.1.13 [H]
Molecular weight: Translated: 63090; Mature: 62959
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYNSATDLLQREGYGVVHNQFINNMAMYCETRHSILAAIQANRHAPALWVKQKTYTYQE CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH MTDMALSLSDYWHLQGVQRVAILSVRDLAAYSAIWASYLGGMTYIPLNARATTEQIQETL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH IATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEPLRQQYPQHTFHTVQITEQD HHHCCHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCEEEEEEECCC VELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQ EEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCHHHEEHHHHHHCCCCCHHHCCC YSDLTFDLSVHDIFYSLISGACLYVVPELAKLSPAEFIRHHQLTVWLSVPTVIELALQRQ CCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCEEEEEEECHHHHHHHHHHC TLTPHSLPSLRLSFFCGQALLHDLAEQWQQATQQPVINLYGPTECTIAVTYHRFVAHSGM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEHHHHHHCCC ASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLSGKQLVKGYLNDPLNTQSAFF CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHH QHEGRLWCRSGDIVTKSNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVP HCCCEEEEECCCEEEECCCEEEEECCCCCEEEEECCEECHHHHHHHHHHHHHHCCEEEEE WPLSESGYASGTVAFVDTHTQWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDI CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHH KALQQQLASQTYETSH HHHHHHHHHHCCCCCC >Mature Secondary Structure PYNSATDLLQREGYGVVHNQFINNMAMYCETRHSILAAIQANRHAPALWVKQKTYTYQE CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH MTDMALSLSDYWHLQGVQRVAILSVRDLAAYSAIWASYLGGMTYIPLNARATTEQIQETL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHH IATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEPLRQQYPQHTFHTVQITEQD HHHCCHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCEEEEEEECCC VELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQ EEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCHHHEEHHHHHHCCCCCHHHCCC YSDLTFDLSVHDIFYSLISGACLYVVPELAKLSPAEFIRHHQLTVWLSVPTVIELALQRQ CCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCEEEEEEECHHHHHHHHHHC TLTPHSLPSLRLSFFCGQALLHDLAEQWQQATQQPVINLYGPTECTIAVTYHRFVAHSGM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEHHHHHHCCC ASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLSGKQLVKGYLNDPLNTQSAFF CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHH QHEGRLWCRSGDIVTKSNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVP HCCCEEEEECCCEEEECCCEEEEECCCCCEEEEECCEECHHHHHHHHHHHHHHCCEEEEE WPLSESGYASGTVAFVDTHTQWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDI CCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHH KALQQQLASQTYETSH HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA