| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673186
Identifier: 147673186
GI number: 147673186
Start: 709341
End: 709916
Strand: Direct
Name: 147673186
Synonym: VC0395_A0683
Alternate gene names: NA
Gene position: 709341-709916 (Clockwise)
Preceding gene: 147675762
Following gene: 147674067
Centisome position: 23.46
GC content: 51.56
Gene sequence:
>576_bases GTGAGTGAAACAGCCAAAACCCGCAGCCGAAAAAGTGCAACAAAGCCCGCTGTCGAAGGAAGTGATCAGCAAACAGTGGC AGAGAATACCCCCGTTCCTGCGGCGCAAGCCGAACCGGAGCAGGTAGCAAACCCAGAGCCTCCTCAAGCGATGCCAGAGC CACAAGCCTCGGCGGATGAGAAGAAGTCTGAGCAAGATGCGCAGATGACAGGCTCTCAAACGGAAGTGAAGCAAGATGAA GAAGCTAAAGAAGAAAGTCCAATGGGCGCTGCTGTGCAGCTATCTGTTCATGCTGGTCGCGATCTTGATATTAGTGGAGC CTTTAAAGTACGCGCTAAATCAGATCAAGGTTTTTGGCGCGCAGGTATTCAGTTTTTGCGCACCAAAGAAACCGTTCTGC TTGTGGTTGACCAAGTGCCAGAAGACCAGCCTAAAACAGTGGCTCAGGAAGATGGCGAACCAGAGCTTGTTCTGTTCGTT ACTCCGCAAGCGGCAAAGCGAATCCACGGTGAACCTAACCTAGTCGTTGAAGTGGTCGAAGTCTCAGACGTTATCGACGT AAGCGATACGGAGTAA
Upstream 100 bases:
>100_bases TGTAGAAATCGTAGTGAGTCCTTTCATCGCATAACGGCGATAACGAGCTGGCGGTGTTCATTCACCGCCACGTTTAAACC CTGTTTAAAAGGAGTTCACT
Downstream 100 bases:
>100_bases CCCAAATGGCAATCTACGCAACCAAGCAAGACTTGATTGACCGTGACGAGCAGATGCTTTGGAACTTTGCGATCAACCGC GAAACCGGAGAGCTGAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSETAKTRSRKSATKPAVEGSDQQTVAENTPVPAAQAEPEQVANPEPPQAMPEPQASADEKKSEQDAQMTGSQTEVKQDE EAKEESPMGAAVQLSVHAGRDLDISGAFKVRAKSDQGFWRAGIQFLRTKETVLLVVDQVPEDQPKTVAQEDGEPELVLFV TPQAAKRIHGEPNLVVEVVEVSDVIDVSDTE
Sequences:
>Translated_191_residues MSETAKTRSRKSATKPAVEGSDQQTVAENTPVPAAQAEPEQVANPEPPQAMPEPQASADEKKSEQDAQMTGSQTEVKQDE EAKEESPMGAAVQLSVHAGRDLDISGAFKVRAKSDQGFWRAGIQFLRTKETVLLVVDQVPEDQPKTVAQEDGEPELVLFV TPQAAKRIHGEPNLVVEVVEVSDVIDVSDTE >Mature_190_residues SETAKTRSRKSATKPAVEGSDQQTVAENTPVPAAQAEPEQVANPEPPQAMPEPQASADEKKSEQDAQMTGSQTEVKQDEE AKEESPMGAAVQLSVHAGRDLDISGAFKVRAKSDQGFWRAGIQFLRTKETVLLVVDQVPEDQPKTVAQEDGEPELVLFVT PQAAKRIHGEPNLVVEVVEVSDVIDVSDTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20628; Mature: 20497
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETAKTRSRKSATKPAVEGSDQQTVAENTPVPAAQAEPEQVANPEPPQAMPEPQASADE CCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHH KKSEQDAQMTGSQTEVKQDEEAKEESPMGAAVQLSVHAGRDLDISGAFKVRAKSDQGFWR HHHHHHHHHCCCCCHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHH AGIQFLRTKETVLLVVDQVPEDQPKTVAQEDGEPELVLFVTPQAAKRIHGEPNLVVEVVE HHHHHHHCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEECCHHHHHHCCCCCEEEEEEE VSDVIDVSDTE CCCEECCCCCC >Mature Secondary Structure SETAKTRSRKSATKPAVEGSDQQTVAENTPVPAAQAEPEQVANPEPPQAMPEPQASADE CCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHH KKSEQDAQMTGSQTEVKQDEEAKEESPMGAAVQLSVHAGRDLDISGAFKVRAKSDQGFWR HHHHHHHHHCCCCCHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHH AGIQFLRTKETVLLVVDQVPEDQPKTVAQEDGEPELVLFVTPQAAKRIHGEPNLVVEVVE HHHHHHHCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEECCHHHHHHCCCCCEEEEEEE VSDVIDVSDTE CCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA