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The map label for this gene is yafS [H]

Identifier: 147673588

GI number: 147673588

Start: 1942708

End: 1943445

Strand: Reverse

Name: yafS [H]

Synonym: VC0395_A1827

Alternate gene names: 147673588

Gene position: 1943445-1942708 (Counterclockwise)

Preceding gene: 147674622

Following gene: 147674786

Centisome position: 64.27

GC content: 45.39

Gene sequence:

>738_bases
ATGAAACCAGCACGCAGTGATAAAGCGCTTGAAAATCCACACTCATGGGCTCAATTGAAAAATGGCCAATGGGTGAGTGA
ATCTATTCAGACCCGTTTAGATGAATGGTGCCCAAAACTTTTTGGTTACCATATGTTAAAGCTCGGCGGTCTGAGCTGTG
AGCTTGCCAGTTGTACCTGCAATATTCAACACCAAGTACACCTCGATATTGAAAATCCGTTGCATACGGTGATTGCCGAT
AAATATGAGCTGCCGTTTTTGGAGAAGAGTATTGATGTGGCGATTTTGGCGCATCAACTCGACTACAGTAACGATCCTCA
CCGTTTATTACGGGAAGTGGATCGAGTCTTGATTGATGATGGTTATCTGATCATCACCGGTTTTAACCCAATCAGTTTTA
TTGGCTTAGCCAGCCTGATGCCTTGGCGCAAAAACAACTTACCTTGGAGTGGGCGAATGTTTACCCCGAATCGGATTAAA
GATTGGCTAAGCGTACTCAATTACCAAGTGGTTGCTTGCGATCAGTACGCCTTGTTTCCGATGCAAAAATACCGACCTTT
CTGGACTTGGTTGGAAAACGGCCTCGGTGGCTCAAATTCGCCCTTTGGTAGCCTGTACTTTATTGTTGCGCGCAAACGTA
CTTGCCCACTCAAGCCGATTCGTTCTAAATGGCGTTTGAAGCGAAGATTATCGCCGATTGGGGTCAACTATCGAGTTAAT
AGTAAGTCGCAGTCGTGA

Upstream 100 bases:

>100_bases
GCGATTTTGAATCAGCCAGATGTAATTGTCGTCAAATGCAGGTATGCTTTTGATCTGTAACATGAGTTGTCTCCGGTTAC
CTTGATGAAGCGGGTGAGCA

Downstream 100 bases:

>100_bases
CGCTCTTTTGAACTCTCATTCTGAGCCTCTGTGGTTCAAAACGAGTGCCTTTTTGCTGATTGAGCTTCTGTTATTGGGGT
TCAGGTTGATAGCCGATATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKPARSDKALENPHSWAQLKNGQWVSESIQTRLDEWCPKLFGYHMLKLGGLSCELASCTCNIQHQVHLDIENPLHTVIAD
KYELPFLEKSIDVAILAHQLDYSNDPHRLLREVDRVLIDDGYLIITGFNPISFIGLASLMPWRKNNLPWSGRMFTPNRIK
DWLSVLNYQVVACDQYALFPMQKYRPFWTWLENGLGGSNSPFGSLYFIVARKRTCPLKPIRSKWRLKRRLSPIGVNYRVN
SKSQS

Sequences:

>Translated_245_residues
MKPARSDKALENPHSWAQLKNGQWVSESIQTRLDEWCPKLFGYHMLKLGGLSCELASCTCNIQHQVHLDIENPLHTVIAD
KYELPFLEKSIDVAILAHQLDYSNDPHRLLREVDRVLIDDGYLIITGFNPISFIGLASLMPWRKNNLPWSGRMFTPNRIK
DWLSVLNYQVVACDQYALFPMQKYRPFWTWLENGLGGSNSPFGSLYFIVARKRTCPLKPIRSKWRLKRRLSPIGVNYRVN
SKSQS
>Mature_245_residues
MKPARSDKALENPHSWAQLKNGQWVSESIQTRLDEWCPKLFGYHMLKLGGLSCELASCTCNIQHQVHLDIENPLHTVIAD
KYELPFLEKSIDVAILAHQLDYSNDPHRLLREVDRVLIDDGYLIITGFNPISFIGLASLMPWRKNNLPWSGRMFTPNRIK
DWLSVLNYQVVACDQYALFPMQKYRPFWTWLENGLGGSNSPFGSLYFIVARKRTCPLKPIRSKWRLKRRLSPIGVNYRVN
SKSQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=217, Percent_Identity=43.3179723502304, Blast_Score=184, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28374; Mature: 28374

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPARSDKALENPHSWAQLKNGQWVSESIQTRLDEWCPKLFGYHMLKLGGLSCELASCTC
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
NIQHQVHLDIENPLHTVIADKYELPFLEKSIDVAILAHQLDYSNDPHRLLREVDRVLIDD
EEEEEEEEECCCCHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHEECC
GYLIITGFNPISFIGLASLMPWRKNNLPWSGRMFTPNRIKDWLSVLNYQVVACDQYALFP
CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHCCEEEEECCHHCCC
MQKYRPFWTWLENGLGGSNSPFGSLYFIVARKRTCPLKPIRSKWRLKRRLSPIGVNYRVN
HHHCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
SKSQS
CCCCC
>Mature Secondary Structure
MKPARSDKALENPHSWAQLKNGQWVSESIQTRLDEWCPKLFGYHMLKLGGLSCELASCTC
CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
NIQHQVHLDIENPLHTVIADKYELPFLEKSIDVAILAHQLDYSNDPHRLLREVDRVLIDD
EEEEEEEEECCCCHHHHHHCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHEECC
GYLIITGFNPISFIGLASLMPWRKNNLPWSGRMFTPNRIKDWLSVLNYQVVACDQYALFP
CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHCCEEEEECCHHCCC
MQKYRPFWTWLENGLGGSNSPFGSLYFIVARKRTCPLKPIRSKWRLKRRLSPIGVNYRVN
HHHCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
SKSQS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]