| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673440
Identifier: 147673440
GI number: 147673440
Start: 474594
End: 475676
Strand: Direct
Name: 147673440
Synonym: VC0395_A0446
Alternate gene names: NA
Gene position: 474594-475676 (Clockwise)
Preceding gene: 147675277
Following gene: 147675442
Centisome position: 15.69
GC content: 43.12
Gene sequence:
>1083_bases TTGGTACTGAGTGCTTTATTGTCGGTTAAATCGATATTTCAATACCAGTTAGAATTAAGTCGCTTAAATGAGCGATTGAG CGTTTATCGTCAAGCGACCGTATTGCAGTCAATTTCAGCGGTAGTGCTCTCCATCCTTTCGCTCTCTTGGGCGGCGACTA TTGAGTCTGCGTTATTTGCTTTAACCTTGAGCTTTGGCATTGGGGCTTTGTGTCTGGGTTTACCTCAGCGGCCTAAATGG CATATTGCAATGTTAAAGCGTTTGCTTGCTTATGGTATTCCGATCATGTTGGCTGGGGGAATTGGTGTACTGGGTGGACG AATCGATCGTTTATTTATCGCTCATTTTGTTGGGATGAATGAAACCGGTGTTTATGCTGCGCAAGCTAACTTATTGATGG GGGTTTTGGGGCTCGTTTTTATGGTGATTTCTATGCCTCTCTACCCTAACTTAGCCAAACATGCGGAAGATAAAATCGCT CTTGTGAGTCAGCATAAAACCTATCTGCATTTACTGGTTACCCTTACTTTTCCAGCTTTACTTGGTCTTGGCATATTACA AGATGAGATCATTAGGCTCTTTTTGGGTGAGCAATATCTGAGTCGTTCTAGCGAACTATTCTGGGTGTTAGCGATCGCTG TTTATCTGATTAATTTTAAAGGTCATTACCTTGATCATGGTTTACAGTTTCTATTACAGACTCGCAAGCTGCTATGGGTT TCTCTCTCGGGCTTAATCGCGAGCATTTTCCTACTACCTTTGATGCTCAATCAATTTGGCATGTTCGGCGCGGCTATCAC CTTGCTTATAGTGAGTGGCTTAGTCGCAATACTCTCTTTTATTAGCTCATGGCGATCGGGGTATCGTTATGCTATCGGCA TGGATGGCATCAAAGTGATCATTTCGGCACTGCTGATGGGTGGCTACTTATACCTAGTGAAACAGTGGCCATTGGCGATC CATTCGTTATTCGCTCTAGCCTTTTATGTCACTACCTCATTGTTGTTTTATGGTATCTGTTTGTGGTGCTTGAATGCTTT TAATGCACGTCAGCGTTTATTCTCAATCTGGAGGCCTAATTGA
Upstream 100 bases:
>100_bases TCGTTCAAAGCATTTCACTGCTGGTCATCATCGGATCTTTGCTTGGCTTTATTGTTATTGCCGCGACTTTATTTATCAGC AATTGAATTGGGAACGATTA
Downstream 100 bases:
>100_bases GCGAACGTAATCTCAATCGATGGATGATTCTGATTATCCTCAGTGCGTTTCTGTTGGGGGCTTTTTTACTCGAAAATATG GGTATTCAGTACGTTTCAGA
Product: putative polysaccharide export protein
Products: NA
Alternate protein names: Polysaccharide Export Protein
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLGLPQRPKW HIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIA LVSQHKTYLHLLVTLTFPALLGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLYLVKQWPLAI HSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN
Sequences:
>Translated_360_residues MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLGLPQRPKW HIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIA LVSQHKTYLHLLVTLTFPALLGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLYLVKQWPLAI HSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN >Mature_360_residues MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLGLPQRPKW HIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIA LVSQHKTYLHLLVTLTFPALLGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLYLVKQWPLAI HSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40023; Mature: 40023
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLSFGIGALCLGLPQRPKWHIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMN HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHECCCHHHHHHHHHHHHHHHHHCCC ETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH ISALLMGGYLYLVKQWPLAIHSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLSFGIGALCLGLPQRPKWHIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMN HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHECCCHHHHHHHHHHHHHHHHHCCC ETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPAL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH ISALLMGGYLYLVKQWPLAIHSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA