Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147673440

Identifier: 147673440

GI number: 147673440

Start: 474594

End: 475676

Strand: Direct

Name: 147673440

Synonym: VC0395_A0446

Alternate gene names: NA

Gene position: 474594-475676 (Clockwise)

Preceding gene: 147675277

Following gene: 147675442

Centisome position: 15.69

GC content: 43.12

Gene sequence:

>1083_bases
TTGGTACTGAGTGCTTTATTGTCGGTTAAATCGATATTTCAATACCAGTTAGAATTAAGTCGCTTAAATGAGCGATTGAG
CGTTTATCGTCAAGCGACCGTATTGCAGTCAATTTCAGCGGTAGTGCTCTCCATCCTTTCGCTCTCTTGGGCGGCGACTA
TTGAGTCTGCGTTATTTGCTTTAACCTTGAGCTTTGGCATTGGGGCTTTGTGTCTGGGTTTACCTCAGCGGCCTAAATGG
CATATTGCAATGTTAAAGCGTTTGCTTGCTTATGGTATTCCGATCATGTTGGCTGGGGGAATTGGTGTACTGGGTGGACG
AATCGATCGTTTATTTATCGCTCATTTTGTTGGGATGAATGAAACCGGTGTTTATGCTGCGCAAGCTAACTTATTGATGG
GGGTTTTGGGGCTCGTTTTTATGGTGATTTCTATGCCTCTCTACCCTAACTTAGCCAAACATGCGGAAGATAAAATCGCT
CTTGTGAGTCAGCATAAAACCTATCTGCATTTACTGGTTACCCTTACTTTTCCAGCTTTACTTGGTCTTGGCATATTACA
AGATGAGATCATTAGGCTCTTTTTGGGTGAGCAATATCTGAGTCGTTCTAGCGAACTATTCTGGGTGTTAGCGATCGCTG
TTTATCTGATTAATTTTAAAGGTCATTACCTTGATCATGGTTTACAGTTTCTATTACAGACTCGCAAGCTGCTATGGGTT
TCTCTCTCGGGCTTAATCGCGAGCATTTTCCTACTACCTTTGATGCTCAATCAATTTGGCATGTTCGGCGCGGCTATCAC
CTTGCTTATAGTGAGTGGCTTAGTCGCAATACTCTCTTTTATTAGCTCATGGCGATCGGGGTATCGTTATGCTATCGGCA
TGGATGGCATCAAAGTGATCATTTCGGCACTGCTGATGGGTGGCTACTTATACCTAGTGAAACAGTGGCCATTGGCGATC
CATTCGTTATTCGCTCTAGCCTTTTATGTCACTACCTCATTGTTGTTTTATGGTATCTGTTTGTGGTGCTTGAATGCTTT
TAATGCACGTCAGCGTTTATTCTCAATCTGGAGGCCTAATTGA

Upstream 100 bases:

>100_bases
TCGTTCAAAGCATTTCACTGCTGGTCATCATCGGATCTTTGCTTGGCTTTATTGTTATTGCCGCGACTTTATTTATCAGC
AATTGAATTGGGAACGATTA

Downstream 100 bases:

>100_bases
GCGAACGTAATCTCAATCGATGGATGATTCTGATTATCCTCAGTGCGTTTCTGTTGGGGGCTTTTTTACTCGAAAATATG
GGTATTCAGTACGTTTCAGA

Product: putative polysaccharide export protein

Products: NA

Alternate protein names: Polysaccharide Export Protein

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLGLPQRPKW
HIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIA
LVSQHKTYLHLLVTLTFPALLGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV
SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLYLVKQWPLAI
HSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN

Sequences:

>Translated_360_residues
MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLGLPQRPKW
HIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIA
LVSQHKTYLHLLVTLTFPALLGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV
SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLYLVKQWPLAI
HSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN
>Mature_360_residues
MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALCLGLPQRPKW
HIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIA
LVSQHKTYLHLLVTLTFPALLGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV
SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLYLVKQWPLAI
HSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40023; Mature: 40023

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLSFGIGALCLGLPQRPKWHIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHECCCHHHHHHHHHHHHHHHHHCCC
ETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH
ISALLMGGYLYLVKQWPLAIHSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVLSALLSVKSIFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLSFGIGALCLGLPQRPKWHIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMN
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHECCCHHHHHHHHHHHHHHHHHCCC
ETGVYAAQANLLMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLGILQDEIIRLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SLSGLIASIFLLPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHH
ISALLMGGYLYLVKQWPLAIHSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA