| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675442
Identifier: 147675442
GI number: 147675442
Start: 475673
End: 476893
Strand: Direct
Name: 147675442
Synonym: VC0395_A0447
Alternate gene names: NA
Gene position: 475673-476893 (Clockwise)
Preceding gene: 147673440
Following gene: 147675712
Centisome position: 15.73
GC content: 42.42
Gene sequence:
>1221_bases TTGAGCGAACGTAATCTCAATCGATGGATGATTCTGATTATCCTCAGTGCGTTTCTGTTGGGGGCTTTTTTACTCGAAAA TATGGGTATTCAGTACGTTTCAGAAGGCGGAAGCCCCATACTCAAAATTCATGTCTATTCCTATTTGACTATGGGGATTT TTGCCCTGTTGATATTATGGGTAGGACTTTTCAATCTTATTAAGCCTTTGAATGAGCTTAAAAAGGCATGGTGGCTGGCC ATGGTATCGATGCTGGCCGTTATTTTATACGGCTTTATGCGATTCGGTACGTCGGGACTCGCTTATCTTATCGATACGAT TTTTATCCCTTTGGTTTTGGTTCCTATTGTATACGGGTTATCCGATACAGCTAAAAATCGATTACTTGCTCTACTCGGCT ATCTTCTATTTCTTAATGCTTGTATTGCTATTATTGAGCTTATATTGGCGCAGAGTATTGTGGCGGTAGAGATTGGAAGT TTTTCAACTTTCCGTTCGACCGCCTTTTTGGCGCATCCACTGAACAATGCGCTCATTACGGCGTCATTAACGCCGATTGT GATGCGTTATACACGAATTCCGGTGGCTTTGTATGTCTCTGTTATCGTGCTAGCCCTGTTTGCTTTTGGAGGGCGAGCTG CGTTGGGGATTTTCCTATTGGGGAATTTTCTGATGCTGTTGCCTAAATTACGTGACTTTTTAGGCCAAGGCATTCGTTAC CATAAGTTGAAATTCGCTTATCTGCAGGCCTTAGTCTATTTCTCTGTAATTGCCGTTATTTTGACCCTGGTGTTAAGTCC TATAGGTGAGCGAATACTGTCTAAATTGTATCTCGACAAAAGCGCCGAAGCGCGATTCGATGTTTTTATTTTGCTTGAAC AGCTTTCACCTTCGGAGTGGGTATTTGGAGCCTCTCATGGATTACTGAGTGATATTGCCTTTTATATCGGGATCAATGTC GTGGAAAATTATTTAATTGGCTGGGTTCTTAACTTTGGCTTACTAGGGGCGATCGGCTTATTACTGGCAACTTACACTGT TCCAGTGCGCTTGATTTACCGACAAGAACTTCCTGCTCAAGTTGCTTTACTCAGTTTTATGTTGATATCACTGACTAACA ATGCGCTAACGGTGAAGACTCCTGCACTCGTGTTATTCGTTGTCGCTTTAGTTTGTCGTTATCGTTCATCTGATCGTTCG TTGGCGAGCAAGAGTCATTAG
Upstream 100 bases:
>100_bases CCTTTTATGTCACTACCTCATTGTTGTTTTATGGTATCTGTTTGTGGTGCTTGAATGCTTTTAATGCACGTCAGCGTTTA TTCTCAATCTGGAGGCCTAA
Downstream 100 bases:
>100_bases GAGATAAGAAATGTGGTTGTACCGTGTTGGCCATTTCTTCCATAAGCGCCGCATACCTCTATTACCTCAGGTCTGTAATG GTTTGATTCGTTTGGTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSERNLNRWMILIILSAFLLGAFLLENMGIQYVSEGGSPILKIHVYSYLTMGIFALLILWVGLFNLIKPLNELKKAWWLA MVSMLAVILYGFMRFGTSGLAYLIDTIFIPLVLVPIVYGLSDTAKNRLLALLGYLLFLNACIAIIELILAQSIVAVEIGS FSTFRSTAFLAHPLNNALITASLTPIVMRYTRIPVALYVSVIVLALFAFGGRAALGIFLLGNFLMLLPKLRDFLGQGIRY HKLKFAYLQALVYFSVIAVILTLVLSPIGERILSKLYLDKSAEARFDVFILLEQLSPSEWVFGASHGLLSDIAFYIGINV VENYLIGWVLNFGLLGAIGLLLATYTVPVRLIYRQELPAQVALLSFMLISLTNNALTVKTPALVLFVVALVCRYRSSDRS LASKSH
Sequences:
>Translated_406_residues MSERNLNRWMILIILSAFLLGAFLLENMGIQYVSEGGSPILKIHVYSYLTMGIFALLILWVGLFNLIKPLNELKKAWWLA MVSMLAVILYGFMRFGTSGLAYLIDTIFIPLVLVPIVYGLSDTAKNRLLALLGYLLFLNACIAIIELILAQSIVAVEIGS FSTFRSTAFLAHPLNNALITASLTPIVMRYTRIPVALYVSVIVLALFAFGGRAALGIFLLGNFLMLLPKLRDFLGQGIRY HKLKFAYLQALVYFSVIAVILTLVLSPIGERILSKLYLDKSAEARFDVFILLEQLSPSEWVFGASHGLLSDIAFYIGINV VENYLIGWVLNFGLLGAIGLLLATYTVPVRLIYRQELPAQVALLSFMLISLTNNALTVKTPALVLFVVALVCRYRSSDRS LASKSH >Mature_405_residues SERNLNRWMILIILSAFLLGAFLLENMGIQYVSEGGSPILKIHVYSYLTMGIFALLILWVGLFNLIKPLNELKKAWWLAM VSMLAVILYGFMRFGTSGLAYLIDTIFIPLVLVPIVYGLSDTAKNRLLALLGYLLFLNACIAIIELILAQSIVAVEIGSF STFRSTAFLAHPLNNALITASLTPIVMRYTRIPVALYVSVIVLALFAFGGRAALGIFLLGNFLMLLPKLRDFLGQGIRYH KLKFAYLQALVYFSVIAVILTLVLSPIGERILSKLYLDKSAEARFDVFILLEQLSPSEWVFGASHGLLSDIAFYIGINVV ENYLIGWVLNFGLLGAIGLLLATYTVPVRLIYRQELPAQVALLSFMLISLTNNALTVKTPALVLFVVALVCRYRSSDRSL ASKSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45056; Mature: 44925
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERNLNRWMILIILSAFLLGAFLLENMGIQYVSEGGSPILKIHVYSYLTMGIFALLILW CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHH VGLFNLIKPLNELKKAWWLAMVSMLAVILYGFMRFGTSGLAYLIDTIFIPLVLVPIVYGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC SDTAKNRLLALLGYLLFLNACIAIIELILAQSIVAVEIGSFSTFRSTAFLAHPLNNALIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEE ASLTPIVMRYTRIPVALYVSVIVLALFAFGGRAALGIFLLGNFLMLLPKLRDFLGQGIRY EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH HKLKFAYLQALVYFSVIAVILTLVLSPIGERILSKLYLDKSAEARFDVFILLEQLSPSEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCE VFGASHGLLSDIAFYIGINVVENYLIGWVLNFGLLGAIGLLLATYTVPVRLIYRQELPAQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VALLSFMLISLTNNALTVKTPALVLFVVALVCRYRSSDRSLASKSH HHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure SERNLNRWMILIILSAFLLGAFLLENMGIQYVSEGGSPILKIHVYSYLTMGIFALLILW CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHH VGLFNLIKPLNELKKAWWLAMVSMLAVILYGFMRFGTSGLAYLIDTIFIPLVLVPIVYGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC SDTAKNRLLALLGYLLFLNACIAIIELILAQSIVAVEIGSFSTFRSTAFLAHPLNNALIT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCEEE ASLTPIVMRYTRIPVALYVSVIVLALFAFGGRAALGIFLLGNFLMLLPKLRDFLGQGIRY EHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH HKLKFAYLQALVYFSVIAVILTLVLSPIGERILSKLYLDKSAEARFDVFILLEQLSPSEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCE VFGASHGLLSDIAFYIGINVVENYLIGWVLNFGLLGAIGLLLATYTVPVRLIYRQELPAQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VALLSFMLISLTNNALTVKTPALVLFVVALVCRYRSSDRSLASKSH HHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA