| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675277
Identifier: 147675277
GI number: 147675277
Start: 474271
End: 474579
Strand: Direct
Name: 147675277
Synonym: VC0395_A0445
Alternate gene names: NA
Gene position: 474271-474579 (Clockwise)
Preceding gene: 147673642
Following gene: 147673440
Centisome position: 15.68
GC content: 46.28
Gene sequence:
>309_bases TTGATTGCTAGTCTACTCAAATATGCTCCTGTTCAGGTCTTTTCCGCTCTGAGTGTCTTTGCTCTGATCGCTGTACAAAC TCGCTTTCTCTCTCCGGAACATTATGGTGTGTTGGCGGTAGCGATGGTGGTGCTCGAACTCGTGCGTGCTTTTAGTGCTC AGTGGCTCAACACGTCGATGTTACGTCTTTACCCTGGGTATTCAGATAGGGAGCAAGTCCAACTCGTTCAAAGCATTTCA CTGCTGGTCATCATCGGATCTTTGCTTGGCTTTATTGTTATTGCCGCGACTTTATTTATCAGCAATTGA
Upstream 100 bases:
>100_bases AAATAACGGATACTCAAGCGATTCAAACCTATTTGCGCGATCAATTCGCAGTAGAAAATGTGATTGAACATTACCAGAAT CTATATCGAGAGGTACTGAG
Downstream 100 bases:
>100_bases ATTGGGAACGATTATTGGTACTGAGTGCTTTATTGTCGGTTAAATCGATATTTCAATACCAGTTAGAATTAAGTCGCTTA AATGAGCGATTGAGCGTTTA
Product: putative polysaccharide export protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MIASLLKYAPVQVFSALSVFALIAVQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSMLRLYPGYSDREQVQLVQSIS LLVIIGSLLGFIVIAATLFISN
Sequences:
>Translated_102_residues MIASLLKYAPVQVFSALSVFALIAVQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSMLRLYPGYSDREQVQLVQSIS LLVIIGSLLGFIVIAATLFISN >Mature_102_residues MIASLLKYAPVQVFSALSVFALIAVQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSMLRLYPGYSDREQVQLVQSIS LLVIIGSLLGFIVIAATLFISN
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11204; Mature: 11204
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASLLKYAPVQVFSALSVFALIAVQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH LRLYPGYSDREQVQLVQSISLLVIIGSLLGFIVIAATLFISN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIASLLKYAPVQVFSALSVFALIAVQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH LRLYPGYSDREQVQLVQSISLLVIIGSLLGFIVIAATLFISN HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA