| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is hisB
Identifier: 147673310
GI number: 147673310
Start: 729173
End: 730246
Strand: Direct
Name: hisB
Synonym: VC0395_A0705
Alternate gene names: 147673310
Gene position: 729173-730246 (Clockwise)
Preceding gene: 147673356
Following gene: 147675540
Centisome position: 24.11
GC content: 49.81
Gene sequence:
>1074_bases GTGAGCAAACAACAAAAAATTCTTTTTATCGACCGCGACGGCACCTTAATTGTTGAGCCGCCAGTGGATTTTCAAGTTGA CCGTTTGGACAAACTCAAACTTGAGCCTTATGTGATCCCAAGCCTGCTCAAGCTACAAGAGGCGGGTTATCGTTTGGTGA TGGTGACCAATCAGGATGGTTTAGGCACTTCAAGCTACCCGCAAGCGGATTTCGATGCGCCGCATAACATGATGATGGAC ATTTTTGAATCGCAAGGCGTGAAGTTTAATGATGTGCTGATTTGCCCGCACTTTGAGCGTGATAACTGTTCGTGCCGCAA ACCGAAACTTGGCTTGGTCAAAGAGTATCTGCAAGGTGGCAAAGTCGATTTCAAATCGTCAGCCGTGATTGGCGATCGCA TGACCGATCTGCAACTGGCTGAAAATATGGCGATTCGCGGTATTCAATACCACCCACAAACCATGGGGTGGCTGGATATC GTTAAAGATCTCACCACCAAGCCACGTGTTGCCCAAGTGGTGCGTAAAACCAAAGAGACCGATATTCAGGTTCTAGTCAA TCTTGACCAAACTGGCGGTAATCAGATTGAAACTGGATTGGGCTTTTTTGATCACATGCTAGATCAAATCGCGACCCACG GCGGTTTCCAACTGCAACTGAAAGTGGTGGGCGATCTGCACATTGATGATCACCACACGGTGGAAGATACCGCCTTGGCA CTAGGGCAAGCACTGCGTGAAGCACTGGGTGACAAACGTGGTATTGGACGCTTTGGTTTCACATTGCCCATGGATGAGTG TTTGGCACAGTGCGCGTTGGATCTCTCGGGCCGCCCGTATCTGAAATTTGATGCGAGCTTTAGCCGCCCGCAAGTGGGCG ATCTGTCGACTGAGATGGTGTATCACTTCTTTCGCTCATTGACCGATACTTTGGCGTGTACTCTGCACCTCTCTTCCAGT GGCGATAACGATCACCACATCATTGAGAGCCTGTTTAAAGCGTTTGGCCGCACGCTGCGTCAAGCCATCACGGTGCAAGG TAACGATCTGCCGAGCAGTAAAGGGGTGCTCTGA
Upstream 100 bases:
>100_bases CGAAGAGTGTGAAAAAACCGTCGCGTTTATTCGCAACTACTACCAGTAATTTTGTTTACAGCAGCTCGCTGCGCGGGCTG CTGATGAAAAGGACATTCTT
Downstream 100 bases:
>100_bases TGACTCAGAATGTGGTGATTATTGATACTGGCTGCGCCAATATCTCCTCGGTCAAATTCGCCATTGAACGATTAGGTTAT GCGGTGACGATTTCGCGCGA
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKLEPYVIPSLLKLQEAGYRLVMVTNQDGLGTSSYPQADFDAPHNMMMD IFESQGVKFNDVLICPHFERDNCSCRKPKLGLVKEYLQGGKVDFKSSAVIGDRMTDLQLAENMAIRGIQYHPQTMGWLDI VKDLTTKPRVAQVVRKTKETDIQVLVNLDQTGGNQIETGLGFFDHMLDQIATHGGFQLQLKVVGDLHIDDHHTVEDTALA LGQALREALGDKRGIGRFGFTLPMDECLAQCALDLSGRPYLKFDASFSRPQVGDLSTEMVYHFFRSLTDTLACTLHLSSS GDNDHHIIESLFKAFGRTLRQAITVQGNDLPSSKGVL
Sequences:
>Translated_357_residues MSKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKLEPYVIPSLLKLQEAGYRLVMVTNQDGLGTSSYPQADFDAPHNMMMD IFESQGVKFNDVLICPHFERDNCSCRKPKLGLVKEYLQGGKVDFKSSAVIGDRMTDLQLAENMAIRGIQYHPQTMGWLDI VKDLTTKPRVAQVVRKTKETDIQVLVNLDQTGGNQIETGLGFFDHMLDQIATHGGFQLQLKVVGDLHIDDHHTVEDTALA LGQALREALGDKRGIGRFGFTLPMDECLAQCALDLSGRPYLKFDASFSRPQVGDLSTEMVYHFFRSLTDTLACTLHLSSS GDNDHHIIESLFKAFGRTLRQAITVQGNDLPSSKGVL >Mature_356_residues SKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKLEPYVIPSLLKLQEAGYRLVMVTNQDGLGTSSYPQADFDAPHNMMMDI FESQGVKFNDVLICPHFERDNCSCRKPKLGLVKEYLQGGKVDFKSSAVIGDRMTDLQLAENMAIRGIQYHPQTMGWLDIV KDLTTKPRVAQVVRKTKETDIQVLVNLDQTGGNQIETGLGFFDHMLDQIATHGGFQLQLKVVGDLHIDDHHTVEDTALAL GQALREALGDKRGIGRFGFTLPMDECLAQCALDLSGRPYLKFDASFSRPQVGDLSTEMVYHFFRSLTDTLACTLHLSSSG DNDHHIIESLFKAFGRTLRQAITVQGNDLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=353, Percent_Identity=68.5552407932011, Blast_Score=505, Evalue=1e-144, Organism=Escherichia coli, GI1786399, Length=150, Percent_Identity=30, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324776, Length=214, Percent_Identity=43.4579439252336, Blast_Score=168, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_VIBCH (Q9KSX1)
Other databases:
- EMBL: AE003852 - PIR: B82238 - RefSeq: NP_230780.1 - ProteinModelPortal: Q9KSX1 - GeneID: 2614405 - GenomeReviews: AE003852_GR - KEGG: vch:VC1135 - TIGR: VC_1135 - HOGENOM: HBG289010 - OMA: QDGLGTP - ProtClustDB: PRK05446 - BRENDA: 3.1.3.15 - BRENDA: 4.2.1.19 - GO: GO:0005737 - HAMAP: MF_01022 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 - Gene3D: G3DSA:3.40.50.1000 - TIGRFAMs: TIGR01662 - TIGRFAMs: TIGR01261 - TIGRFAMs: TIGR01656
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P; SSF54211 Ribosomal_S5_D2-typ_fold; SSF56784 SSF56784
EC number: =3.1.3.15; =4.2.1.19
Molecular weight: Translated: 39855; Mature: 39724
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKLEPYVIPSLLKLQEAGYRLVMVTNQDG CCCCCEEEEEECCCCEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCC LGTSSYPQADFDAPHNMMMDIFESQGVKFNDVLICPHFERDNCSCRKPKLGLVKEYLQGG CCCCCCCCCCCCCCHHHHHHHHHHCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHCCC KVDFKSSAVIGDRMTDLQLAENMAIRGIQYHPQTMGWLDIVKDLTTKPRVAQVVRKTKET CCCCCCCEEECCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCC DIQVLVNLDQTGGNQIETGLGFFDHMLDQIATHGGFQLQLKVVGDLHIDDHHTVEDTALA CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHH LGQALREALGDKRGIGRFGFTLPMDECLAQCALDLSGRPYLKFDASFSRPQVGDLSTEMV HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHH YHFFRSLTDTLACTLHLSSSGDNDHHIIESLFKAFGRTLRQAITVQGNDLPSSKGVL HHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC >Mature Secondary Structure SKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKLEPYVIPSLLKLQEAGYRLVMVTNQDG CCCCEEEEEECCCCEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCC LGTSSYPQADFDAPHNMMMDIFESQGVKFNDVLICPHFERDNCSCRKPKLGLVKEYLQGG CCCCCCCCCCCCCCHHHHHHHHHHCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHCCC KVDFKSSAVIGDRMTDLQLAENMAIRGIQYHPQTMGWLDIVKDLTTKPRVAQVVRKTKET CCCCCCCEEECCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCC DIQVLVNLDQTGGNQIETGLGFFDHMLDQIATHGGFQLQLKVVGDLHIDDHHTVEDTALA CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHH LGQALREALGDKRGIGRFGFTLPMDECLAQCALDLSGRPYLKFDASFSRPQVGDLSTEMV HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHH YHFFRSLTDTLACTLHLSSSGDNDHHIIESLFKAFGRTLRQAITVQGNDLPSSKGVL HHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301