Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147673091

Identifier: 147673091

GI number: 147673091

Start: 1320215

End: 1320616

Strand: Reverse

Name: 147673091

Synonym: VC0395_A1248

Alternate gene names: NA

Gene position: 1320616-1320215 (Counterclockwise)

Preceding gene: 147674141

Following gene: 147673935

Centisome position: 43.67

GC content: 48.01

Gene sequence:

>402_bases
ATGCCAACAACCGATCAAGCGATAGCCATTACTTTGCCTTCTTTGATTCATCGTATAGGTAGCGATACCGTTAAGCGATT
GAAACTGCAGGCACAGACTTTTGATTGCGAGTTAAAGCGTATTCGTCGCTCGCGAAATTGGCAGTTATTAGGTGAAGCGG
CCTCGATGCAGAAATTTGTTATCCAAATCAAGCAGACCGAATATCAAGTTGCTGAATATCTGATTCGACGCGTGGAAGCC
GGTTTAAGGCTGCCGAGCGACAAGATCGAACCCATCGAAGTCCAGCTGCAGCGTTTAGTTCAGCAAAATCCGTCCATAAC
CTTAGCGGAACTCATGGCAGCTACACATTGCAGCTTGATGCAGGCGCGAGCGGCTCGTTTTGCTGAGGAGAGCTTTGAGT
GA

Upstream 100 bases:

>100_bases
CTGTTATAAAATACCCATTGAATGCTCTTGGTATATTGATGTTAATTATCATCACTATCCAGAACGTATTTGAGAGAACC
TTAATAACTGGAGTGGAGAG

Downstream 100 bases:

>100_bases
CCTTTTTGATGAAGTAAGATTAAGTAGAATCTTTGCTTTATGTGTCGAATATAACTAGTCTTTAATGAGTCTATAATTAA
GGCATAGTCAAATGCATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFVIQIKQTEYQVAEYLIRRVEA
GLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLMQARAARFAEESFE

Sequences:

>Translated_133_residues
MPTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFVIQIKQTEYQVAEYLIRRVEA
GLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLMQARAARFAEESFE
>Mature_132_residues
PTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFVIQIKQTEYQVAEYLIRRVEAG
LRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLMQARAARFAEESFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15237; Mature: 15106

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFV
CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IQIKQTEYQVAEYLIRRVEAGLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QARAARFAEESFE
HHHHHHHHHHCCC
>Mature Secondary Structure 
PTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFV
CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IQIKQTEYQVAEYLIRRVEAGLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLM
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QARAARFAEESFE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA