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The map label for this gene is bfrD [H]

Identifier: 146343120

GI number: 146343120

Start: 6566173

End: 6568713

Strand: Reverse

Name: bfrD [H]

Synonym: BRADO6317

Alternate gene names: 146343120

Gene position: 6568713-6566173 (Counterclockwise)

Preceding gene: 146343121

Following gene: 146343119

Centisome position: 88.09

GC content: 65.25

Gene sequence:

>2541_bases
ATGGGTAAGGCAGTCTTTCCGAGGAGCTTGCGGGGAGCGACCTGGCAGGGATCCTGGCAAGAGGCGGAGCCCTCCGCCGA
CATGTCCGGCGTCAAGGTTTCGGCGGTCGCGAGCCTGATCGCGGTCGCATCATTCTCCAGTGCCGAAGCCCAGCAGGCGC
CGCTGCCCTCGGTCACGGTCGAAGCGCCGGTGGCGCGCCCGAAGCCGCAGGCCTCGCGTCCGACGGCCGATCAGACCCGC
GCCCGCGACGCGATGCGCCGTGCCGCGCGCCAGCAGCAGCAACAGCAGGCCGCCGCGCCGAAGCCCAGCCTGCCGCCCGA
CCGCAACCCGTACTCAAGCCCTGCATCGGACTACAAGGGCGAGCGGCTGCAGGCGTCGGGCAAGTTTCCCGAGAAGCTCC
TGAACACGCCGAAGACCGTCACGGTTCTGAGCAAGGAAATCCTGGCGGACAAGAACTCCACCAGCCTGAAGTCCGCCGTG
CTCTCCACCGCCGGCGTGACGCTCGGCACTGGCGAGGGCGGCAACGCGTTCGGCGACCGCTTCTTCATCCGTGGCTTCGA
CGCCCGCAACGATGTCTTCATCGACGGCGTGCGTGACGCCGGCGTCTCGGTGCGCGAGAACTTCTTCACCGAGCAGGTCG
AGATCCTGCGCGGACCGGCGTCGTCCTTCGCCGGCCGCGGCACCACCGGCGGCGCGATCAACATCGTGACCAAGCAGGCC
ACGACCGAGAACAGCTTCTACAACATGGACACGACGCTCGGCACCGACCAGACCAAGCGCGTGGTGATCGACGTCAATCA
GAAGATCACGCCGACCTTCGCCGCGCGCGTCGGCGGCCTGTTCCAGGATGCCGGCGTCGCCGGCCGTGACTACGTTACCG
ACAACCGCAATGGCGGCTTCATCGCCACCAAATGGACGCCGCTCGACACGGTGACGCTCGCCACCAACTACATCCACACC
GAGGTCTCCGGCCGTCCTGACTTCGGCGTGCCTTACTACCGGCCGAACAATCTCGTGGCCGGCGCGCCATTCCCGGAGGT
CGGCTCGCCGCGCAACGCCTGGTACGGCTTCGCCAACCGCGACTTCCAGCGCATCGGCCAGGACATCGGCACGGTCAACG
CCGAGGTGAAGGTCACCCCGGACCTGACGATCTCGGACAAGATCCGGGTGTCGCGTTCTACCTTGAACTACATCGGCACG
CTGCCGGAGGGTGCGACGATCACCGACCCGATCCAGAACTCGGTGATCCGCGCCAATCCGCAGAGCCGCTTCCAGCAGAC
CGACGTGCTCGCCAATCAGCTCGATGCGACCTACAAGTTCGATACCGGCGCTTTCAAGCACACGCTGGTCGCCGGCCTCG
AAGTGTCGCAGGAAAAGGCCATCATCAACAGCTACACCGGCCTGACCTCGGAGCAGCAGGGCCTGACCTTCTCGGGCAAC
GGCTCGCTCTCGGGGGTGAGCGTGTTCAATCCGCAGTACACCAACTTGCCGTTCGGCATTCCGTCGCTGAGCCAGTTTCC
GACCAACCTGAGGGTCGACACGGTGAGCGTCTATGCGCTCGACAGCGTCAACTATCGCGACCTGGTGATCCTCAACGGCG
GCGTCCGCTACGACAAATATGACGTCCGGGTCGATGGCTTCGGCACCGTCAACGGCGTCGCCAACACGCCGGGCTCCACG
GCCGCCTCCAGCGGCCTGCCAAACTTCAATCTCGGCCTGACCTTGAAGCCCGTACCCTATGCCAGCGTCTACGCGGCCTA
TGCGACGTCGTCGAATCCGGTCGGCGCGGAGTTCGACGGTCTCAGCGCCGCCTATGGCGGCCTGACGGCGGTCACCAATG
GCGGCGCCAACCAGGTGTTCGGGCCTGAGAAAAACACGTCGATCGAGATCGGCACCAAATGGGAGCTGCTCGATGGGCGC
CTGCTGGTCACCGGCGCGCTGTTCCAGACCGAGAAGGAGAATGCCCGCGAATCCTTCAATGTCACCAGCGCCAAGACTGC
GACGGCGGCGTGCCCCTACACGGCGACCTCGGGCAACGTTCCATGCATCTCGGCCGGCGCCGCCTACCGCATCCGCGGCA
TCGATCTCCAGGCCGGCGGCAAGCTGACCGACAAATGGAGCATCTTCGGCGGCCTCGTGCTGATGGAGTCGGAGGTCACC
AAGTCGAACATCCTGCCGGCCAACACGGCGCTGTTCAGAAGCAATGTCGGCCTGCAGCTCGCCAACACCGCACACCAGTC
GTTCAGCCTTTTGACGAAGTACGAGATCAACGACACTTGGGAGATCGGCGGCCAGGCCGTCTACCGCTCCAAGATCTACG
GCGGCACCTGGCTCGCGGCTAACCAGGGCACAGAGTTGCCGAGCTACTGGCGCTTCGACGCCTTTGCGGAAGCCAAGCTC
GACAAGCATTGGACCGCCAAGGTGTTCGTCGCCAACATCTTCGACAAGCTCTACTACGACGCCTTCTATCAGAGCTCCGC
GCCGTTCACCTTCGTCGGCCCGGGCAGAAGCGCGTCGATCGTCCTGTCGGGCCGCTTCTGA

Upstream 100 bases:

>100_bases
TACCCCTCCTCTTGACTTGCATTCGCAACTGGCATCCGCCGGCTGCGGGCGTTCAACGAACACAAGCCTCGCGTTTGCGT
AAAGAATGGGGTGGTCGAGC

Downstream 100 bases:

>100_bases
TGGCGCGATCCGACGGGTCACAACCGGTGGCACCTATCGAGTCGACGCGTTCATGCTGATCTGTGTCCCCGGTATCCTGA
GCAAAGACGATGTGGCGGAG

Product: putative TonB-dependent receptor protein

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 846; Mature: 845

Protein sequence:

>846_residues
MGKAVFPRSLRGATWQGSWQEAEPSADMSGVKVSAVASLIAVASFSSAEAQQAPLPSVTVEAPVARPKPQASRPTADQTR
ARDAMRRAARQQQQQQAAAPKPSLPPDRNPYSSPASDYKGERLQASGKFPEKLLNTPKTVTVLSKEILADKNSTSLKSAV
LSTAGVTLGTGEGGNAFGDRFFIRGFDARNDVFIDGVRDAGVSVRENFFTEQVEILRGPASSFAGRGTTGGAINIVTKQA
TTENSFYNMDTTLGTDQTKRVVIDVNQKITPTFAARVGGLFQDAGVAGRDYVTDNRNGGFIATKWTPLDTVTLATNYIHT
EVSGRPDFGVPYYRPNNLVAGAPFPEVGSPRNAWYGFANRDFQRIGQDIGTVNAEVKVTPDLTISDKIRVSRSTLNYIGT
LPEGATITDPIQNSVIRANPQSRFQQTDVLANQLDATYKFDTGAFKHTLVAGLEVSQEKAIINSYTGLTSEQQGLTFSGN
GSLSGVSVFNPQYTNLPFGIPSLSQFPTNLRVDTVSVYALDSVNYRDLVILNGGVRYDKYDVRVDGFGTVNGVANTPGST
AASSGLPNFNLGLTLKPVPYASVYAAYATSSNPVGAEFDGLSAAYGGLTAVTNGGANQVFGPEKNTSIEIGTKWELLDGR
LLVTGALFQTEKENARESFNVTSAKTATAACPYTATSGNVPCISAGAAYRIRGIDLQAGGKLTDKWSIFGGLVLMESEVT
KSNILPANTALFRSNVGLQLANTAHQSFSLLTKYEINDTWEIGGQAVYRSKIYGGTWLAANQGTELPSYWRFDAFAEAKL
DKHWTAKVFVANIFDKLYYDAFYQSSAPFTFVGPGRSASIVLSGRF

Sequences:

>Translated_846_residues
MGKAVFPRSLRGATWQGSWQEAEPSADMSGVKVSAVASLIAVASFSSAEAQQAPLPSVTVEAPVARPKPQASRPTADQTR
ARDAMRRAARQQQQQQAAAPKPSLPPDRNPYSSPASDYKGERLQASGKFPEKLLNTPKTVTVLSKEILADKNSTSLKSAV
LSTAGVTLGTGEGGNAFGDRFFIRGFDARNDVFIDGVRDAGVSVRENFFTEQVEILRGPASSFAGRGTTGGAINIVTKQA
TTENSFYNMDTTLGTDQTKRVVIDVNQKITPTFAARVGGLFQDAGVAGRDYVTDNRNGGFIATKWTPLDTVTLATNYIHT
EVSGRPDFGVPYYRPNNLVAGAPFPEVGSPRNAWYGFANRDFQRIGQDIGTVNAEVKVTPDLTISDKIRVSRSTLNYIGT
LPEGATITDPIQNSVIRANPQSRFQQTDVLANQLDATYKFDTGAFKHTLVAGLEVSQEKAIINSYTGLTSEQQGLTFSGN
GSLSGVSVFNPQYTNLPFGIPSLSQFPTNLRVDTVSVYALDSVNYRDLVILNGGVRYDKYDVRVDGFGTVNGVANTPGST
AASSGLPNFNLGLTLKPVPYASVYAAYATSSNPVGAEFDGLSAAYGGLTAVTNGGANQVFGPEKNTSIEIGTKWELLDGR
LLVTGALFQTEKENARESFNVTSAKTATAACPYTATSGNVPCISAGAAYRIRGIDLQAGGKLTDKWSIFGGLVLMESEVT
KSNILPANTALFRSNVGLQLANTAHQSFSLLTKYEINDTWEIGGQAVYRSKIYGGTWLAANQGTELPSYWRFDAFAEAKL
DKHWTAKVFVANIFDKLYYDAFYQSSAPFTFVGPGRSASIVLSGRF
>Mature_845_residues
GKAVFPRSLRGATWQGSWQEAEPSADMSGVKVSAVASLIAVASFSSAEAQQAPLPSVTVEAPVARPKPQASRPTADQTRA
RDAMRRAARQQQQQQAAAPKPSLPPDRNPYSSPASDYKGERLQASGKFPEKLLNTPKTVTVLSKEILADKNSTSLKSAVL
STAGVTLGTGEGGNAFGDRFFIRGFDARNDVFIDGVRDAGVSVRENFFTEQVEILRGPASSFAGRGTTGGAINIVTKQAT
TENSFYNMDTTLGTDQTKRVVIDVNQKITPTFAARVGGLFQDAGVAGRDYVTDNRNGGFIATKWTPLDTVTLATNYIHTE
VSGRPDFGVPYYRPNNLVAGAPFPEVGSPRNAWYGFANRDFQRIGQDIGTVNAEVKVTPDLTISDKIRVSRSTLNYIGTL
PEGATITDPIQNSVIRANPQSRFQQTDVLANQLDATYKFDTGAFKHTLVAGLEVSQEKAIINSYTGLTSEQQGLTFSGNG
SLSGVSVFNPQYTNLPFGIPSLSQFPTNLRVDTVSVYALDSVNYRDLVILNGGVRYDKYDVRVDGFGTVNGVANTPGSTA
ASSGLPNFNLGLTLKPVPYASVYAAYATSSNPVGAEFDGLSAAYGGLTAVTNGGANQVFGPEKNTSIEIGTKWELLDGRL
LVTGALFQTEKENARESFNVTSAKTATAACPYTATSGNVPCISAGAAYRIRGIDLQAGGKLTDKWSIFGGLVLMESEVTK
SNILPANTALFRSNVGLQLANTAHQSFSLLTKYEINDTWEIGGQAVYRSKIYGGTWLAANQGTELPSYWRFDAFAEAKLD
KHWTAKVFVANIFDKLYYDAFYQSSAPFTFVGPGRSASIVLSGRF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=744, Percent_Identity=27.2849462365591, Blast_Score=213, Evalue=3e-56,
Organism=Escherichia coli, GI1786344, Length=634, Percent_Identity=22.5552050473186, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 90692; Mature: 90561

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKAVFPRSLRGATWQGSWQEAEPSADMSGVKVSAVASLIAVASFSSAEAQQAPLPSVTV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHCCCCCEEE
EAPVARPKPQASRPTADQTRARDAMRRAARQQQQQQAAAPKPSLPPDRNPYSSPASDYKG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ERLQASGKFPEKLLNTPKTVTVLSKEILADKNSTSLKSAVLSTAGVTLGTGEGGNAFGDR
CEEECCCCCCHHHHCCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCE
FFIRGFDARNDVFIDGVRDAGVSVRENFFTEQVEILRGPASSFAGRGTTGGAINIVTKQA
EEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEEECC
TTENSFYNMDTTLGTDQTKRVVIDVNQKITPTFAARVGGLFQDAGVAGRDYVTDNRNGGF
CCCCCEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHHCCCCCCCCEECCCCCCE
IATKWTPLDTVTLATNYIHTEVSGRPDFGVPYYRPNNLVAGAPFPEVGSPRNAWYGFANR
EEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCC
DFQRIGQDIGTVNAEVKVTPDLTISDKIRVSRSTLNYIGTLPEGATITDPIQNSVIRANP
HHHHHHHHHCCCCEEEEECCCCEECCCEEEEHHHHHHHCCCCCCCEECCHHHCCEEECCC
QSRFQQTDVLANQLDATYKFDTGAFKHTLVAGLEVSQEKAIINSYTGLTSEQQGLTFSGN
HHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
GSLSGVSVFNPQYTNLPFGIPSLSQFPTNLRVDTVSVYALDSVNYRDLVILNGGVRYDKY
CCCCEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEEEECCCCCEEEEEECCCCEECEE
DVRVDGFGTVNGVANTPGSTAASSGLPNFNLGLTLKPVPYASVYAAYATSSNPVGAEFDG
EEEECCCEEECCCCCCCCCCHHHCCCCCCCCCEEECCCCCHHEEEEEECCCCCCCCCCCC
LSAAYGGLTAVTNGGANQVFGPEKNTSIEIGTKWELLDGRLLVTGALFQTEKENARESFN
CHHHCCCEEEEECCCCCCCCCCCCCCEEEECCEEEEECCEEEEEEEEHHCCHHHHHHHCC
VTSAKTATAACPYTATSGNVPCISAGAAYRIRGIDLQAGGKLTDKWSIFGGLVLMESEVT
CCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCCHHHHCCEEEEECCCC
KSNILPANTALFRSNVGLQLANTAHQSFSLLTKYEINDTWEIGGQAVYRSKIYGGTWLAA
CCCCCCCCHHHEECCCCEEEECHHHHCEEEEEEEECCCCEECCCEEEEEEEECCCEEEEC
NQGTELPSYWRFDAFAEAKLDKHWTAKVFVANIFDKLYYDAFYQSSAPFTFVGPGRSASI
CCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEE
VLSGRF
EEECCC
>Mature Secondary Structure 
GKAVFPRSLRGATWQGSWQEAEPSADMSGVKVSAVASLIAVASFSSAEAQQAPLPSVTV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHCCCCCEEE
EAPVARPKPQASRPTADQTRARDAMRRAARQQQQQQAAAPKPSLPPDRNPYSSPASDYKG
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ERLQASGKFPEKLLNTPKTVTVLSKEILADKNSTSLKSAVLSTAGVTLGTGEGGNAFGDR
CEEECCCCCCHHHHCCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCE
FFIRGFDARNDVFIDGVRDAGVSVRENFFTEQVEILRGPASSFAGRGTTGGAINIVTKQA
EEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEEECC
TTENSFYNMDTTLGTDQTKRVVIDVNQKITPTFAARVGGLFQDAGVAGRDYVTDNRNGGF
CCCCCEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHHCCCCCCCCEECCCCCCE
IATKWTPLDTVTLATNYIHTEVSGRPDFGVPYYRPNNLVAGAPFPEVGSPRNAWYGFANR
EEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCC
DFQRIGQDIGTVNAEVKVTPDLTISDKIRVSRSTLNYIGTLPEGATITDPIQNSVIRANP
HHHHHHHHHCCCCEEEEECCCCEECCCEEEEHHHHHHHCCCCCCCEECCHHHCCEEECCC
QSRFQQTDVLANQLDATYKFDTGAFKHTLVAGLEVSQEKAIINSYTGLTSEQQGLTFSGN
HHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
GSLSGVSVFNPQYTNLPFGIPSLSQFPTNLRVDTVSVYALDSVNYRDLVILNGGVRYDKY
CCCCEEEEECCCCCCCCCCCCCHHHCCCCEEEEEEEEEEECCCCCEEEEEECCCCEECEE
DVRVDGFGTVNGVANTPGSTAASSGLPNFNLGLTLKPVPYASVYAAYATSSNPVGAEFDG
EEEECCCEEECCCCCCCCCCHHHCCCCCCCCCEEECCCCCHHEEEEEECCCCCCCCCCCC
LSAAYGGLTAVTNGGANQVFGPEKNTSIEIGTKWELLDGRLLVTGALFQTEKENARESFN
CHHHCCCEEEEECCCCCCCCCCCCCCEEEECCEEEEECCEEEEEEEEHHCCHHHHHHHCC
VTSAKTATAACPYTATSGNVPCISAGAAYRIRGIDLQAGGKLTDKWSIFGGLVLMESEVT
CCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCCCHHHHCCEEEEECCCC
KSNILPANTALFRSNVGLQLANTAHQSFSLLTKYEINDTWEIGGQAVYRSKIYGGTWLAA
CCCCCCCCHHHEECCCCEEEECHHHHCEEEEEEEECCCCEECCCEEEEEEEECCCEEEEC
NQGTELPSYWRFDAFAEAKLDKHWTAKVFVANIFDKLYYDAFYQSSAPFTFVGPGRSASI
CCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEE
VLSGRF
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]