BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is fabG [H]

Identifier: 146343095

GI number: 146343095

Start: 6532026

End: 6532757

Strand: Reverse

Name: fabG [H]

Synonym: BRADO6290

Alternate gene names: 146343095

Gene position: 6532757-6532026 (Counterclockwise)

Preceding gene: 146343096

Following gene: 146343094

Centisome position: 87.61

GC content: 67.76

Gene sequence:

>732_bases
ATGCGTAACGTCCTGGTCACCGGTGGAAGCCGCGGCATCGGACTTGCGATCGCCCGCAGGCTCGCCGGCGCGGGCTTTGA
TGTGATCGCGGTCGCCCGACGCGAGAGCGAGGAACTGCGCGCGGCCGTCGCCGAATTCAGCGCGAGCAGCGCCGGCATCC
ATTTCCGCGCCTGCGACCTCAGCGCGGTCGATGCGATCCCGGCCTTCGTGAAGTCGGTACGCGACGAGTTCGGCCCGCTC
TATGGCCTCGTCAACAATGCCGGCATCGGGACCGAGGGCCTGCTCGCGACCATGCACAATTCGGAGATCGAGGGCCTCGT
GCGCCTCAATGTGCTGGCGCCGATGATCCTGACCAAATACGTCGTGCGGCACATGATGGCCGCGGGCGAGGGGCGTATCG
TCAACATCTCCTCGATCATCGCGAGCACCGGCTATAACGGCCTGTCCGTCTACGGCGCCACCAAGGCGGCGGCCAACGGC
TTCACCCGATCGCTGGCGCGCGAGGTCGGCAAGGTCGGCATCACCGTGAACGCGATCGCGCCGGGCTTCATCGCCACCGA
GTTGACGCAAAGCATGGACGAGTCGCAGCAGCAGCGCATCGCCGGCCGCAGCGCGCTGCGTAGGTTGCCCGAGACCTCGG
ACGTCGCCGCGATGGTCGAGTTCCTGCTCGGCGAGGGCGGGCGCAACGTCACCGGCGCGGTGCTGACCGTCGATGCGGGC
AATACCGCCTGA

Upstream 100 bases:

>100_bases
GCCGAGTGCCGCGCGCGTCTCGCGGCCCACAAGGTGCCGGCGATGCTCCGCTTCGTGCCGGCGCTCGACGTCACTCCGGC
CGGCAAGCTGGCGCGCACCG

Downstream 100 bases:

>100_bases
CGCGATGATCCGCCGCATCAGCGTTGATTTCGCTCAAGCGTCCGAGGCGCGGTCGCGGCGATAGTGCCGGCGCAATCCGG
ATCTGATCGCCATGTTCGAA

Product: putative 3-oxoacyl-[acyl-carrier-protein] reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRNVLVTGGSRGIGLAIARRLAGAGFDVIAVARRESEELRAAVAEFSASSAGIHFRACDLSAVDAIPAFVKSVRDEFGPL
YGLVNNAGIGTEGLLATMHNSEIEGLVRLNVLAPMILTKYVVRHMMAAGEGRIVNISSIIASTGYNGLSVYGATKAAANG
FTRSLAREVGKVGITVNAIAPGFIATELTQSMDESQQQRIAGRSALRRLPETSDVAAMVEFLLGEGGRNVTGAVLTVDAG
NTA

Sequences:

>Translated_243_residues
MRNVLVTGGSRGIGLAIARRLAGAGFDVIAVARRESEELRAAVAEFSASSAGIHFRACDLSAVDAIPAFVKSVRDEFGPL
YGLVNNAGIGTEGLLATMHNSEIEGLVRLNVLAPMILTKYVVRHMMAAGEGRIVNISSIIASTGYNGLSVYGATKAAANG
FTRSLAREVGKVGITVNAIAPGFIATELTQSMDESQQQRIAGRSALRRLPETSDVAAMVEFLLGEGGRNVTGAVLTVDAG
NTA
>Mature_243_residues
MRNVLVTGGSRGIGLAIARRLAGAGFDVIAVARRESEELRAAVAEFSASSAGIHFRACDLSAVDAIPAFVKSVRDEFGPL
YGLVNNAGIGTEGLLATMHNSEIEGLVRLNVLAPMILTKYVVRHMMAAGEGRIVNISSIIASTGYNGLSVYGATKAAANG
FTRSLAREVGKVGITVNAIAPGFIATELTQSMDESQQQRIAGRSALRRLPETSDVAAMVEFLLGEGGRNVTGAVLTVDAG
NTA

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=35.3191489361702, Blast_Score=122, Evalue=2e-28,
Organism=Homo sapiens, GI32483357, Length=242, Percent_Identity=32.2314049586777, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI15277342, Length=245, Percent_Identity=32.6530612244898, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=29.1666666666667, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=30.7086614173228, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=30.5785123966942, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI109715829, Length=233, Percent_Identity=29.1845493562232, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI19743808, Length=219, Percent_Identity=27.8538812785388, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=32.6424870466321, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=29.8429319371728, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI210032110, Length=193, Percent_Identity=29.0155440414508, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI4503817, Length=201, Percent_Identity=30.8457711442786, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=199, Percent_Identity=31.1557788944724, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40807363, Length=187, Percent_Identity=31.0160427807487, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI31542939, Length=214, Percent_Identity=29.4392523364486, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI4557649, Length=194, Percent_Identity=26.2886597938144, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI7657478, Length=192, Percent_Identity=30.7291666666667, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI50726952, Length=218, Percent_Identity=27.9816513761468, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI59889578, Length=142, Percent_Identity=30.9859154929577, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI142976729, Length=210, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI225579078, Length=202, Percent_Identity=30.1980198019802, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI126723191, Length=176, Percent_Identity=31.8181818181818, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI66933014, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI209862901, Length=195, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI19923983, Length=195, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1787335, Length=237, Percent_Identity=37.9746835443038, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=27.7777777777778, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=31.404958677686, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI87082160, Length=242, Percent_Identity=28.5123966942149, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788459, Length=238, Percent_Identity=31.0924369747899, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=30, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI2367365, Length=245, Percent_Identity=33.469387755102, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786701, Length=198, Percent_Identity=32.3232323232323, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=32.0987654320988, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787891, Length=253, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=25.0996015936255, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=27.4193548387097, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=25.6809338521401, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=34.7107438016529, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17560676, Length=242, Percent_Identity=31.404958677686, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=241, Percent_Identity=33.195020746888, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30.4, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=246, Percent_Identity=30.8943089430894, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=244, Percent_Identity=29.9180327868852, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=212, Percent_Identity=31.1320754716981, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=28.3524904214559, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=259, Percent_Identity=26.6409266409266, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=236, Percent_Identity=28.3898305084746, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=190, Percent_Identity=29.4736842105263, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI25152911, Length=235, Percent_Identity=29.7872340425532, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=196, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=202, Percent_Identity=31.6831683168317, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=27.6264591439689, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=239, Percent_Identity=32.2175732217573, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=28.5171102661597, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=237, Percent_Identity=28.2700421940928, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=194, Percent_Identity=32.4742268041237, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=195, Percent_Identity=31.2820512820513, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17558006, Length=246, Percent_Identity=23.9837398373984, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=190, Percent_Identity=30, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=200, Percent_Identity=33, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=195, Percent_Identity=30.2564102564103, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=194, Percent_Identity=29.3814432989691, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=193, Percent_Identity=25.9067357512953, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=257, Percent_Identity=28.0155642023346, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=193, Percent_Identity=25.9067357512953, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=198, Percent_Identity=34.8484848484849, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320089, Length=195, Percent_Identity=29.2307692307692, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322795, Length=234, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=225, Percent_Identity=28, Blast_Score=73, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=33.1983805668016, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=31.3008130081301, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21356301, Length=185, Percent_Identity=32.972972972973, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=27.7551020408163, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=31.25, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI116007236, Length=196, Percent_Identity=32.6530612244898, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=29.9595141700405, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=30.3643724696356, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=30, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21358495, Length=246, Percent_Identity=29.2682926829268, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24644337, Length=221, Percent_Identity=32.579185520362, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24648944, Length=191, Percent_Identity=30.8900523560209, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI116007238, Length=214, Percent_Identity=30.8411214953271, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24584748, Length=205, Percent_Identity=29.7560975609756, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161076933, Length=205, Percent_Identity=29.7560975609756, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281364494, Length=196, Percent_Identity=31.6326530612245, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571387, Length=200, Percent_Identity=29.5, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24584752, Length=186, Percent_Identity=29.5698924731183, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI116007234, Length=234, Percent_Identity=28.6324786324786, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24586328, Length=202, Percent_Identity=28.2178217821782, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648693, Length=234, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355889, Length=234, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17737361, Length=233, Percent_Identity=29.6137339055794, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641232, Length=211, Percent_Identity=28.436018957346, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161076371, Length=204, Percent_Identity=29.9019607843137, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580925, Length=198, Percent_Identity=32.8282828282828, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24640442, Length=192, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581726, Length=131, Percent_Identity=32.0610687022901, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281364892, Length=166, Percent_Identity=27.710843373494, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19921754, Length=202, Percent_Identity=27.2277227722772, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25276; Mature: 25276

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVLVTGGSRGIGLAIARRLAGAGFDVIAVARRESEELRAAVAEFSASSAGIHFRACDL
CCCEEEECCCCCHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHHCCCCCCEEEEECCC
SAVDAIPAFVKSVRDEFGPLYGLVNNAGIGTEGLLATMHNSEIEGLVRLNVLAPMILTKY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHH
VVRHMMAAGEGRIVNISSIIASTGYNGLSVYGATKAAANGFTRSLAREVGKVGITVNAIA
HHHHHHHCCCCCEEEHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCC
PGFIATELTQSMDESQQQRIAGRSALRRLPETSDVAAMVEFLLGEGGRNVTGAVLTVDAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECC
NTA
CCC
>Mature Secondary Structure
MRNVLVTGGSRGIGLAIARRLAGAGFDVIAVARRESEELRAAVAEFSASSAGIHFRACDL
CCCEEEECCCCCHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHHCCCCCCEEEEECCC
SAVDAIPAFVKSVRDEFGPLYGLVNNAGIGTEGLLATMHNSEIEGLVRLNVLAPMILTKY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHH
VVRHMMAAGEGRIVNISSIIASTGYNGLSVYGATKAAANGFTRSLAREVGKVGITVNAIA
HHHHHHHCCCCCEEEHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCC
PGFIATELTQSMDESQQQRIAGRSALRRLPETSDVAAMVEFLLGEGGRNVTGAVLTVDAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECC
NTA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10464226; 10984043 [H]