| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is menE [H]
Identifier: 146343096
GI number: 146343096
Start: 6532750
End: 6534138
Strand: Reverse
Name: menE [H]
Synonym: BRADO6291
Alternate gene names: 146343096
Gene position: 6534138-6532750 (Counterclockwise)
Preceding gene: 146343097
Following gene: 146343095
Centisome position: 87.63
GC content: 67.67
Gene sequence:
>1389_bases ATGTCCCCGCGTGAGGTCTTTGCGCTGCGCGACCATCTCGGCACTGACCTGACCGAGCGGACCATTTCGGATCCGCGTCA CGTCGTCGGGCTGGCCGAGCTGTCGCGCAAAAGCTGTCTCGGCGGCCGCATCGGCGAGCTCGACGGCCGCTCGGTGCTGG TCGCAACCTCCGGCCAGCTGCTGGCGGGCTTGGCCTTGGTCGAGATCGACGGCGTGGCCCGGCGCATGCTGCTGTGCCCG CCGGATCTGAAGAGCGAGCATCTGACCAGCATCATCGCGGACGCCGGAATTGATGCTGTGGTCACCGACGAGCCGGAACG CTTCGCAGATTGCGGGATCGATCGCGTGGTCCTGGTCGGGCTGCCGCAGCCCGTCGCATGCATGGCGCAGACGGTGCGGG CGACCGAATGGCTGATGCTGACGTCGGGAACGTCGGGCGTTCCGAAGATCGTCGGCCACACGCTGGATGGCCTATGCGGC GCCATCATCGGCGATCGACCGGCCCCTGGCGATGCGCTTCCGGTGTGGGCGACGTTCTACGACATCCGCCGCTATGGCGG ACTGCAGATCTTTCTCCGCGCGATCGTCGGCGGCGGCTCCATGGTGCTGTCCGATCCGGGCGAGGCGCTGTCCGATCACG TCGCGCGTCTGAATGCGAGCGGAGTCTCGCACATCTCTGGCACGCCGTCGCATTGGCGCAAGCTGCTGATGAGCGGCTCG GCCGAGCAATTCGCTCCGCGTTATGTGCGGCTGTCGGGCGAGATCGCCGACCAAGCCGTGCTCGACGGTCTGAAGCAGGC GTTCCCGAATTCCTCGATCGGACACGCCTATGCCTCGACGGAAGCGGGAGTCGGCTTTGCTGTCAATGACGGACTGGAGG GCTTTCCCGCCACGCTGCTCGGCGAGGGCCTCGGTGCCGTTGACATGAAGATCGTCGACGGATCGTTGCGCATCCGCTCC AAGCGTGCGGCGCATGCCTATGTCGGGCGCGCCGCGGCGGCGCTGACCGACGCCGACGGCTATGTCGACACCGGCGACAT GGTTGAGCTGCGTGGCGATCGCTACTACTTCGTCGGACGGCGCAACGGCATCATCAATGTCGGCGGCCTGAAGGTGCATC CCGAGGAGATCGAGGCCGTGATCAATGGCCATCCGGCCGTCCGGATGTCGCGCGCGAAATCGCGCCGCAGCCCGATCACC GGCGGCATCGTCGTAGCCGAGGTCGTCCTGACGGCGGACGGCGATCCGGCGCGCGCCGACGCTGTTCGCAACGAGATCCT CGCCGAGTGCCGCGCGCGTCTCGCGGCCCACAAGGTGCCGGCGATGCTCCGCTTCGTGCCGGCGCTCGACGTCACTCCGG CCGGCAAGCTGGCGCGCACCGATGCGTAA
Upstream 100 bases:
>100_bases GTCGCCCGTCTCGAGGACGATCTCGGCGTCGATCCGTTCACCCTGTCTGAAGAGGTCACGTTCCCCAACACGATCGGCGA CTTCATCAGGGCTTATGAGA
Downstream 100 bases:
>100_bases CGTCCTGGTCACCGGTGGAAGCCGCGGCATCGGACTTGCGATCGCCCGCAGGCTCGCCGGCGCGGGCTTTGATGTGATCG CGGTCGCCCGACGCGAGAGC
Product: putative 2-succinylbenzoate--CoA ligase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MSPREVFALRDHLGTDLTERTISDPRHVVGLAELSRKSCLGGRIGELDGRSVLVATSGQLLAGLALVEIDGVARRMLLCP PDLKSEHLTSIIADAGIDAVVTDEPERFADCGIDRVVLVGLPQPVACMAQTVRATEWLMLTSGTSGVPKIVGHTLDGLCG AIIGDRPAPGDALPVWATFYDIRRYGGLQIFLRAIVGGGSMVLSDPGEALSDHVARLNASGVSHISGTPSHWRKLLMSGS AEQFAPRYVRLSGEIADQAVLDGLKQAFPNSSIGHAYASTEAGVGFAVNDGLEGFPATLLGEGLGAVDMKIVDGSLRIRS KRAAHAYVGRAAAALTDADGYVDTGDMVELRGDRYYFVGRRNGIINVGGLKVHPEEIEAVINGHPAVRMSRAKSRRSPIT GGIVVAEVVLTADGDPARADAVRNEILAECRARLAAHKVPAMLRFVPALDVTPAGKLARTDA
Sequences:
>Translated_462_residues MSPREVFALRDHLGTDLTERTISDPRHVVGLAELSRKSCLGGRIGELDGRSVLVATSGQLLAGLALVEIDGVARRMLLCP PDLKSEHLTSIIADAGIDAVVTDEPERFADCGIDRVVLVGLPQPVACMAQTVRATEWLMLTSGTSGVPKIVGHTLDGLCG AIIGDRPAPGDALPVWATFYDIRRYGGLQIFLRAIVGGGSMVLSDPGEALSDHVARLNASGVSHISGTPSHWRKLLMSGS AEQFAPRYVRLSGEIADQAVLDGLKQAFPNSSIGHAYASTEAGVGFAVNDGLEGFPATLLGEGLGAVDMKIVDGSLRIRS KRAAHAYVGRAAAALTDADGYVDTGDMVELRGDRYYFVGRRNGIINVGGLKVHPEEIEAVINGHPAVRMSRAKSRRSPIT GGIVVAEVVLTADGDPARADAVRNEILAECRARLAAHKVPAMLRFVPALDVTPAGKLARTDA >Mature_461_residues SPREVFALRDHLGTDLTERTISDPRHVVGLAELSRKSCLGGRIGELDGRSVLVATSGQLLAGLALVEIDGVARRMLLCPP DLKSEHLTSIIADAGIDAVVTDEPERFADCGIDRVVLVGLPQPVACMAQTVRATEWLMLTSGTSGVPKIVGHTLDGLCGA IIGDRPAPGDALPVWATFYDIRRYGGLQIFLRAIVGGGSMVLSDPGEALSDHVARLNASGVSHISGTPSHWRKLLMSGSA EQFAPRYVRLSGEIADQAVLDGLKQAFPNSSIGHAYASTEAGVGFAVNDGLEGFPATLLGEGLGAVDMKIVDGSLRIRSK RAAHAYVGRAAAALTDADGYVDTGDMVELRGDRYYFVGRRNGIINVGGLKVHPEEIEAVINGHPAVRMSRAKSRRSPITG GIVVAEVVLTADGDPARADAVRNEILAECRARLAAHKVPAMLRFVPALDVTPAGKLARTDA
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Homo sapiens, GI38505220, Length=361, Percent_Identity=25.4847645429363, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI122937307, Length=362, Percent_Identity=24.8618784530387, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI115511026, Length=203, Percent_Identity=25.615763546798, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1788595, Length=257, Percent_Identity=26.0700389105058, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 48718; Mature: 48587
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPREVFALRDHLGTDLTERTISDPRHVVGLAELSRKSCLGGRIGELDGRSVLVATSGQL CCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHH LAGLALVEIDGVARRMLLCPPDLKSEHLTSIIADAGIDAVVTDEPERFADCGIDRVVLVG HHCCCEEEECHHHHHEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEEE LPQPVACMAQTVRATEWLMLTSGTSGVPKIVGHTLDGLCGAIIGDRPAPGDALPVWATFY CCCCHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DIRRYGGLQIFLRAIVGGGSMVLSDPGEALSDHVARLNASGVSHISGTPSHWRKLLMSGS HHHHHCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC AEQFAPRYVRLSGEIADQAVLDGLKQAFPNSSIGHAYASTEAGVGFAVNDGLEGFPATLL HHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHH GEGLGAVDMKIVDGSLRIRSKRAAHAYVGRAAAALTDADGYVDTGDMVELRGDRYYFVGR HCCCCEEEEEEECCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEC RNGIINVGGLKVHPEEIEAVINGHPAVRMSRAKSRRSPITGGIVVAEVVLTADGDPARAD CCCEEEECCEEECHHHHHHHHCCCCCEEEHHHHHHCCCCCCCEEEEEEEEECCCCCHHHH AVRNEILAECRARLAAHKVPAMLRFVPALDVTPAGKLARTDA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SPREVFALRDHLGTDLTERTISDPRHVVGLAELSRKSCLGGRIGELDGRSVLVATSGQL CCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHH LAGLALVEIDGVARRMLLCPPDLKSEHLTSIIADAGIDAVVTDEPERFADCGIDRVVLVG HHCCCEEEECHHHHHEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEEE LPQPVACMAQTVRATEWLMLTSGTSGVPKIVGHTLDGLCGAIIGDRPAPGDALPVWATFY CCCCHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH DIRRYGGLQIFLRAIVGGGSMVLSDPGEALSDHVARLNASGVSHISGTPSHWRKLLMSGS HHHHHCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC AEQFAPRYVRLSGEIADQAVLDGLKQAFPNSSIGHAYASTEAGVGFAVNDGLEGFPATLL HHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHH GEGLGAVDMKIVDGSLRIRSKRAAHAYVGRAAAALTDADGYVDTGDMVELRGDRYYFVGR HCCCCEEEEEEECCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEC RNGIINVGGLKVHPEEIEAVINGHPAVRMSRAKSRRSPITGGIVVAEVVLTADGDPARAD CCCEEEECCEEECHHHHHHHHCCCCCEEEHHHHHHCCCCCCCEEEEEEEEECCCCCHHHH AVRNEILAECRARLAAHKVPAMLRFVPALDVTPAGKLARTDA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA