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The map label for this gene is cyc1 [H]

Identifier: 146343089

GI number: 146343089

Start: 6524863

End: 6525501

Strand: Reverse

Name: cyc1 [H]

Synonym: BRADO6284

Alternate gene names: 146343089

Gene position: 6525501-6524863 (Counterclockwise)

Preceding gene: 146343090

Following gene: 146343088

Centisome position: 87.51

GC content: 63.85

Gene sequence:

>639_bases
ATGAGGTTTACCGATCCATGGCGGCTGGTGGGATGCGTCACGTTGCTGATCGTGGTCGGCGGCGGTGCCAGCCGAGCCGC
GGACACGATCGACCGAAACGGCTTTGAAGCGAAGCTGCTGTACTGCAAGACCTGTCATGGACAGTCCGGGCAGGGCTATC
ACGGCTTTTTCCCAATTCCGCGTCTCGCCGGACAGCCGTCGCAATATGTCGAGAACCAGTTACGTGCTTTCATCGAGCAT
CGGCGCAGCAATCCGGTCATGTTCAACGTAGCCCACGCGCTGAGCCCGGCGATGGTGACGGCGCTCGCCAGCCATTTCAA
GGCGCTCGATCCAAAGCCCCTCGGCGGGGCGCCGCGCGGATCGGTTGCCGCCGGCAGGCAGATCTATGAGTCCGGTCTTC
CGGACAGCAACGTTCCCGCCTGCTCCGCCTGTCACGGTGATGACGGCAAGGGCCAGCGTGACATTCCGCGCCTTGCGGGT
CAGCTCTATGCCTACACAGTCGGGCAGCTCACGGGATGGCGAAGTGAGCGCGGGCAGGGTGCCGCGGCCGACAGCTCCGC
CATCATGACGCAGACGGCGCACAATCTGACCAGGGCGCAGGTCGAAGCCGTCGCTGCCTATGTTGCCAACCTGCAATGA

Upstream 100 bases:

>100_bases
GACGGTCAAAGTCGGAGTCAATTTCCATGTCGGAGGGGCTGGTCTCTAGGCGGCGGCGAACGGGCGGGTGTGACGATCAG
GCGACGCAGAGGCGAGAGCG

Downstream 100 bases:

>100_bases
GCGTCCGCGTTTTGGTGGCTTTGGCCGGTCGGGACCATGAGCGAGGGTCTGCAAGCATGAAGCGCTCGATTCGGAAGATA
GCAGTCGTTGTGATCTTGGC

Product: putative cytochrome c family protein

Products: ferricytochrome c; H2O

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRFTDPWRLVGCVTLLIVVGGGASRAADTIDRNGFEAKLLYCKTCHGQSGQGYHGFFPIPRLAGQPSQYVENQLRAFIEH
RRSNPVMFNVAHALSPAMVTALASHFKALDPKPLGGAPRGSVAAGRQIYESGLPDSNVPACSACHGDDGKGQRDIPRLAG
QLYAYTVGQLTGWRSERGQGAAADSSAIMTQTAHNLTRAQVEAVAAYVANLQ

Sequences:

>Translated_212_residues
MRFTDPWRLVGCVTLLIVVGGGASRAADTIDRNGFEAKLLYCKTCHGQSGQGYHGFFPIPRLAGQPSQYVENQLRAFIEH
RRSNPVMFNVAHALSPAMVTALASHFKALDPKPLGGAPRGSVAAGRQIYESGLPDSNVPACSACHGDDGKGQRDIPRLAG
QLYAYTVGQLTGWRSERGQGAAADSSAIMTQTAHNLTRAQVEAVAAYVANLQ
>Mature_212_residues
MRFTDPWRLVGCVTLLIVVGGGASRAADTIDRNGFEAKLLYCKTCHGQSGQGYHGFFPIPRLAGQPSQYVENQLRAFIEH
RRSNPVMFNVAHALSPAMVTALASHFKALDPKPLGGAPRGSVAAGRQIYESGLPDSNVPACSACHGDDGKGQRDIPRLAG
QLYAYTVGQLTGWRSERGQGAAADSSAIMTQTAHNLTRAQVEAVAAYVANLQ

Specific function: Diheme, high potential cytochrome c [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: 1.9.3.1

Molecular weight: Translated: 22608; Mature: 22608

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTDPWRLVGCVTLLIVVGGGASRAADTIDRNGFEAKLLYCKTCHGQSGQGYHGFFPIP
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCH
RLAGQPSQYVENQLRAFIEHRRSNPVMFNVAHALSPAMVTALASHFKALDPKPLGGAPRG
HHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SVAAGRQIYESGLPDSNVPACSACHGDDGKGQRDIPRLAGQLYAYTVGQLTGWRSERGQG
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAADSSAIMTQTAHNLTRAQVEAVAAYVANLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFTDPWRLVGCVTLLIVVGGGASRAADTIDRNGFEAKLLYCKTCHGQSGQGYHGFFPIP
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCH
RLAGQPSQYVENQLRAFIEHRRSNPVMFNVAHALSPAMVTALASHFKALDPKPLGGAPRG
HHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SVAAGRQIYESGLPDSNVPACSACHGDDGKGQRDIPRLAGQLYAYTVGQLTGWRSERGQG
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAADSSAIMTQTAHNLTRAQVEAVAAYVANLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973648 [H]