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The map label for this gene is omp31 [H]

Identifier: 146343090

GI number: 146343090

Start: 6525553

End: 6526356

Strand: Reverse

Name: omp31 [H]

Synonym: BRADO6285

Alternate gene names: 146343090

Gene position: 6526356-6525553 (Counterclockwise)

Preceding gene: 146343091

Following gene: 146343089

Centisome position: 87.52

GC content: 61.94

Gene sequence:

>804_bases
ATGAGCAAACGTCTGGTCTGCCTCGGAGGAGTCGTGGCCGTCTTGATCCCGGGCGGTTCTGTGTTTGCCGCCGATCTTCC
GGTGAAGGCGCCGACGTTTGCCGAGCGGTTCGCTTGGTCGGGCTGCCATCTCGGTCTGCATCTCGGAGGTGCTTGGGCGA
GCAATTCCATCACCGATCCAGTGCTGCTGGTGCAGGACAATGGAAATCTTGGCGGACCGGGATTCACGACCGTGGGGACG
ACGGTCAAGACGGGCCAGAGCGGCGGCATTGCCGGGGGCCAGATCGGCTGTGACTATCAGTTCCCGTCCAGCGTCGTCGT
TGGCGCGGAGTTCTCTGCCTCTGGTGCTGCCCTGAATGGATCCCGGACCTTTGCGCTGCCCGACAGTCCTCCGGACATCG
CGCAAGCGAAGATCAAGACCGATTTCATCACCGACCTGACCGCGAGAGCCGGTTACGCAGTCGATCACTGGCTGTTTTAC
GCCAAGGGCGGCGTTGCCTGGGCCAGCACGAAATACAGCGTGACCGGTGGCTTCACCAACGCGGGCGCGAATCCTGCAAT
TGCATTCGACTTCGAGGGGCTGAGCGTCCGTACCGGATGGACGGCCGGGGCGGGCGTCGAATGGGCCTTCGCGCAGGATT
GGTCGGCGAGGTTCGAGTACGACTATTACGATTTCGGCACCCGCGCGGTGAACATGGTCGATGTTCTGAACGGCAATGCC
GCAGCCGGCCCATTGAGCTTCAAGACGTCGGTTCAGACGGTCAAAGTCGGAGTCAATTTCCATGTCGGAGGGGCTGGTCT
CTAG

Upstream 100 bases:

>100_bases
GTTCAACGGCACCACGGTCGGCGCCCAGGACAACAACACCCTTTTCCTGCACGCATGGTTCGCGTTCTAGGCGGGAACGA
GAGCGTATGGAGAGCCTGTC

Downstream 100 bases:

>100_bases
GCGGCGGCGAACGGGCGGGTGTGACGATCAGGCGACGCAGAGGCGAGAGCGATGAGGTTTACCGATCCATGGCGGCTGGT
GGGATGCGTCACGTTGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSKRLVCLGGVVAVLIPGGSVFAADLPVKAPTFAERFAWSGCHLGLHLGGAWASNSITDPVLLVQDNGNLGGPGFTTVGT
TVKTGQSGGIAGGQIGCDYQFPSSVVVGAEFSASGAALNGSRTFALPDSPPDIAQAKIKTDFITDLTARAGYAVDHWLFY
AKGGVAWASTKYSVTGGFTNAGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQDWSARFEYDYYDFGTRAVNMVDVLNGNA
AAGPLSFKTSVQTVKVGVNFHVGGAGL

Sequences:

>Translated_267_residues
MSKRLVCLGGVVAVLIPGGSVFAADLPVKAPTFAERFAWSGCHLGLHLGGAWASNSITDPVLLVQDNGNLGGPGFTTVGT
TVKTGQSGGIAGGQIGCDYQFPSSVVVGAEFSASGAALNGSRTFALPDSPPDIAQAKIKTDFITDLTARAGYAVDHWLFY
AKGGVAWASTKYSVTGGFTNAGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQDWSARFEYDYYDFGTRAVNMVDVLNGNA
AAGPLSFKTSVQTVKVGVNFHVGGAGL
>Mature_266_residues
SKRLVCLGGVVAVLIPGGSVFAADLPVKAPTFAERFAWSGCHLGLHLGGAWASNSITDPVLLVQDNGNLGGPGFTTVGTT
VKTGQSGGIAGGQIGCDYQFPSSVVVGAEFSASGAALNGSRTFALPDSPPDIAQAKIKTDFITDLTARAGYAVDHWLFYA
KGGVAWASTKYSVTGGFTNAGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQDWSARFEYDYYDFGTRAVNMVDVLNGNAA
AGPLSFKTSVQTVKVGVNFHVGGAGL

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 27488; Mature: 27357

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLVCLGGVVAVLIPGGSVFAADLPVKAPTFAERFAWSGCHLGLHLGGAWASNSITDP
CCCCEEEECCEEEEEECCCCEEEECCCCCCCCHHHHHCCCCEEEEEEECCEECCCCCCCC
VLLVQDNGNLGGPGFTTVGTTVKTGQSGGIAGGQIGCDYQFPSSVVVGAEFSASGAALNG
EEEEECCCCCCCCCCEEECCEEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCCEECC
SRTFALPDSPPDIAQAKIKTDFITDLTARAGYAVDHWLFYAKGGVAWASTKYSVTGGFTN
CEEEECCCCCCCHHHEEEEHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEEEEEECCCCC
AGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQDWSARFEYDYYDFGTRAVNMVDVLNGNA
CCCCCEEEEEECCEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEEEEEEECCCC
AAGPLSFKTSVQTVKVGVNFHVGGAGL
CCCCEEEECCEEEEEEEEEEEECCCCC
>Mature Secondary Structure 
SKRLVCLGGVVAVLIPGGSVFAADLPVKAPTFAERFAWSGCHLGLHLGGAWASNSITDP
CCCEEEECCEEEEEECCCCEEEECCCCCCCCHHHHHCCCCEEEEEEECCEECCCCCCCC
VLLVQDNGNLGGPGFTTVGTTVKTGQSGGIAGGQIGCDYQFPSSVVVGAEFSASGAALNG
EEEEECCCCCCCCCCEEECCEEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCCEECC
SRTFALPDSPPDIAQAKIKTDFITDLTARAGYAVDHWLFYAKGGVAWASTKYSVTGGFTN
CEEEECCCCCCCHHHEEEEHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEEEEEECCCCC
AGANPAIAFDFEGLSVRTGWTAGAGVEWAFAQDWSARFEYDYYDFGTRAVNMVDVLNGNA
CCCCCEEEEEECCEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCEEEEEEEEECCCC
AAGPLSFKTSVQTVKVGVNFHVGGAGL
CCCCEEEECCEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]