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The map label for this gene is cyc1 [H]

Identifier: 146343088

GI number: 146343088

Start: 6524210

End: 6524806

Strand: Reverse

Name: cyc1 [H]

Synonym: BRADO6283

Alternate gene names: 146343088

Gene position: 6524806-6524210 (Counterclockwise)

Preceding gene: 146343089

Following gene: 146343086

Centisome position: 87.5

GC content: 63.48

Gene sequence:

>597_bases
ATGAAGCGCTCGATTCGGAAGATAGCAGTCGTTGTGATCTTGGCTATCACTGCACCGGCCCAGGCAGACGAGGCCCGAAG
CGCCCGAAACTGCACCTGGTGCCACGGCACGGCTGGTCAGGGCTTCACGGTCGCACCGCGTCTGGCCGGACAGCAGCCGC
AATACATCGAGAGCCAGATCAGGAGCTTCCACGACCATACCCGGGACAATCCGTTCTCCAAACAATACATGTGGGGCGCG
GTGGCGTCGCTCGATCCGGGCACGGCTCAAGAGCTGGCGCGCTATTTCGCGTCGATCGCGCCAAAGCCGGCCAATGACGG
CGACCCAGCGCTGATCGCCAGGGGGCGGAAGATCTATCAGGAAGGCGTTCCGGAAGCGAATATCGTCTCCTGCTATGCCT
GCCATGGCCCCGACGCGCAGGGTGTGCGCGACATTCCGAGGCTCGGAGGTCTCAGCTTTTCCTACCTCAAGGGACGGCTC
GACCAATGGGGCAGGGGCTATCATTCGACCCCCGCCTCGCCGATGCCGTTGGTCGCCGGATCGCTGGGGCCCGCGGAGAT
CGACGCCCTTGCGTCCTATCTCAGCTTCGTCAGATAG

Upstream 100 bases:

>100_bases
CGCAGGTCGAAGCCGTCGCTGCCTATGTTGCCAACCTGCAATGAGCGTCCGCGTTTTGGTGGCTTTGGCCGGTCGGGACC
ATGAGCGAGGGTCTGCAAGC

Downstream 100 bases:

>100_bases
GGGCAATACGCCGGCAGGGCCGGTCGACGTCGCGTGGAACGACCCCGGTTCTCGATGCGCCGGACCTTTGGGTCATGCCG
TTCAGCTCTGCCTGGAAGGC

Product: putative cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKRSIRKIAVVVILAITAPAQADEARSARNCTWCHGTAGQGFTVAPRLAGQQPQYIESQIRSFHDHTRDNPFSKQYMWGA
VASLDPGTAQELARYFASIAPKPANDGDPALIARGRKIYQEGVPEANIVSCYACHGPDAQGVRDIPRLGGLSFSYLKGRL
DQWGRGYHSTPASPMPLVAGSLGPAEIDALASYLSFVR

Sequences:

>Translated_198_residues
MKRSIRKIAVVVILAITAPAQADEARSARNCTWCHGTAGQGFTVAPRLAGQQPQYIESQIRSFHDHTRDNPFSKQYMWGA
VASLDPGTAQELARYFASIAPKPANDGDPALIARGRKIYQEGVPEANIVSCYACHGPDAQGVRDIPRLGGLSFSYLKGRL
DQWGRGYHSTPASPMPLVAGSLGPAEIDALASYLSFVR
>Mature_198_residues
MKRSIRKIAVVVILAITAPAQADEARSARNCTWCHGTAGQGFTVAPRLAGQQPQYIESQIRSFHDHTRDNPFSKQYMWGA
VASLDPGTAQELARYFASIAPKPANDGDPALIARGRKIYQEGVPEANIVSCYACHGPDAQGVRDIPRLGGLSFSYLKGRL
DQWGRGYHSTPASPMPLVAGSLGPAEIDALASYLSFVR

Specific function: Diheme, high potential cytochrome c [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21397; Mature: 21397

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSIRKIAVVVILAITAPAQADEARSARNCTWCHGTAGQGFTVAPRLAGQQPQYIESQI
CCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECCCCCCCEEECCHHCCCCCHHHHHHH
RSFHDHTRDNPFSKQYMWGAVASLDPGTAQELARYFASIAPKPANDGDPALIARGRKIYQ
HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
EGVPEANIVSCYACHGPDAQGVRDIPRLGGLSFSYLKGRLDQWGRGYHSTPASPMPLVAG
HCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SLGPAEIDALASYLSFVR
CCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKRSIRKIAVVVILAITAPAQADEARSARNCTWCHGTAGQGFTVAPRLAGQQPQYIESQI
CCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEECCCCCCCEEECCHHCCCCCHHHHHHH
RSFHDHTRDNPFSKQYMWGAVASLDPGTAQELARYFASIAPKPANDGDPALIARGRKIYQ
HHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
EGVPEANIVSCYACHGPDAQGVRDIPRLGGLSFSYLKGRLDQWGRGYHSTPASPMPLVAG
HCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SLGPAEIDALASYLSFVR
CCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973648 [H]