| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yejH [C]
Identifier: 146342677
GI number: 146342677
Start: 6060551
End: 6062515
Strand: Reverse
Name: yejH [C]
Synonym: BRADO5844
Alternate gene names: 146342677
Gene position: 6062515-6060551 (Counterclockwise)
Preceding gene: 146342680
Following gene: 146342676
Centisome position: 81.3
GC content: 59.85
Gene sequence:
>1965_bases ATGAGCTATAGAATGGTAACCGAGGGAAGAGCCGTGACCCGAGACCAGCCCAACCTTCTTGGGACAACAGAACGCGATCG CGAAATCGCGGCCCTCCGCGAGCGGTTGGCACGGCTCGAATCCGAAAAGGCAGAACTACAAGCCAATCTCAAGAGGCTGA TCTCCGCTCCGGAAGCTCATCGCAGCCCGCATCTTGCCGGCGGCGTCTCGGTGACAAATGCCTCGAGCCCCGCCACCAAG ATAGCTCTGTTTCGTTCGCTATTTCGAGGCCGACATGATGTGTTCCCGAAGCGTTGGGAGAACGCGAAGACTGGCAAGGC AGGCTATGCCCCGGCCTGTGCCAATGAGTGGATGCCGCGAATCTGCGGCAAGCCGAAAGCAAAGTGCGGTGACTGTCCGC ATCATGCCTTCCTTCCCGTCACCGATGATGTGATCGGTGGACACCTCCGTGGACACCATACGATTGGTGTCTATCCTCTC CTGACGGATGAAACTTGCTGGTTTCTGGCAGTCGATTTTGACAAGGCGACTTGGACGAATGATTCCGCCGCTTTCCTGCA AGCATGCTCGGCGCGCGGCATTCCGGCGGCGCTCGAGCGTTCCCGTTCAGGGCAAGGGGCTCACGTGTGGATTTTCTTCG CGGAGCCGGTTACGGCCGCGATCGCGCGTCGGCTCGGCGCGCATCTCATCACGGAGACCATGGAGCGCAATCCAGACATC GGCTTTTCGTCCTATGACCGGTTCTTCCCCAGTCAGGATAGTATGCCGGCAGGCGGTTTCGGCAATCTCATCGCGCTTCC CTTGCAACATGATCCGCGCTCGACTGGGAACAGCCTTTTTCTCGACGAGACGACCTTCGAGCCTTATTCCGATCAATGGG CTTTCCTTGCGACGGTCAGGCGTATGACGCTTACAGAGGCAACAGCGGTTGCGGAAGAGGCCGGAAGACAGGGACGAGTG ACGGGACTGCATTTGCCTCTGGATGAGGAGGACGATGCGCCTTGGGCCGTGCCGCCCTCCCGGCGGAAACCGGAGATCTC GATTACCGGACCCATGCCTGACCGCATCGATGTCGTGCTGGCAGACCAGATCTATATGCAGCGTGAAGGGCTTCCCGCCA GCCTCGTCAATCGGCTCATTCGGCTGGCCGCTTTTCAGAACCCGGCGTTCTACAGCGCACAAGCCATGCGGCTTTCGACA TTTGGCCTTCCGCGCATTATTGCATGCGCCGAACTGCTTTCGCATCACATGGCCCTGCCACGCGGGTGCCGTGAGGGTCT TGCGGAGTTGGCGAGCGGCCTGAACGTCGATCTGCGCTGGCAGGATAAACGAAACGCGGGAGCCGACATCCAGGCGCGCT TTCTTGGGACGCTGACCAAGGAGCAGAAGACAGCAGTCACAGCCCTGCTGGCGCACGAAACCGGCGTGCTGGCAGCGACT ACGGGATTCGGGAAGACGGTCGTGGCGGCGGCGATGATTGCCGAACGCAAGGCCTCCACGCTCATCCTCGTGCATCGCCG TCAGCTCATGGAGCAATGGGCCACACGTCTGCAAAGCTTCCTCGATTTGCCGCAGCACAGTATCGGCCAGGTCGGTGGAG GAGCGCGCAAACCGACTGGCATCATTGACATCGCGATGATCCAAAGCCTTGCCCGCGGGGGCGTGGTGGATGATCTGGTT GCTGGATATGGCCAACTGATTGTCGATGAATGCCATCATCTTTCGGCCGTCAGCTTCGAGGCGGTCGTCACCCGCAAAGA CGGTCATCACACGATCATCTTCATGCAATGTGGTCCCGTACGTTTCCGTGTAGATGCAAAATCTCAAGCCGCTCGACGTC CCTTCGGTCTCGCGTCGTGCGGCGCAGAACATTCTTCGTGCTTCCACCTGAGCTCCAGTACGATCGTCCGCCGATTCAGC AGGTCTACGCGGCGCTTGCCGCTGACGAGGCTCGCAACGCTATGA
Upstream 100 bases:
>100_bases ATGGGTGGTCATGGTCGGATCCTTGCCGGGTCCCAATATATGACGTCCCTCAATTAACTGCAATATCTGAAATGTTCTGC TGAAGGCGCGGACCTCGGCA
Downstream 100 bases:
>100_bases TCTTTGACGATGTCTTACAGGCGCTGGAGCATAAGCGGTCGCCGGTCATCTTGACCGAGCGCAGGGACCACGCGTTGCTC CTGGCCGAGAGGCTGTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type III Restriction Res Subunit; Helicase; Superfamily II DNA/RNA Helicase; Type III Restriction Res Subunit Family; DNA/RNA Repair Helicase; ATP-Dependet DEAD/DEAH Box Helicase; ATP-Dependent Helicase; Type III Restriction Protein; Nucleic Acid ATP-Dependent Helicase; DEAD/DEAH Box Helicase; DNA Repair Protein RAD; DNA/RNA Helicase; ATP-Dependent RNA Helicase; Type III Restriction- System Subunit Res; DNA Or RNA Helicase Of Superfamily II-Like Protein; Restriction Endonuclease Family Protein; DNA Or RNA Helicases Of Superfamily II; DEAD/DEAH Box Family Helicase; DNA Helicase
Number of amino acids: Translated: 654; Mature: 653
Protein sequence:
>654_residues MSYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAHRSPHLAGGVSVTNASSPATK IALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPRICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPL LTDETCWFLAVDFDKATWTNDSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVRRMTLTEATAVAEEAGRQGRV TGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVLADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLST FGLPRIIACAELLSHHMALPRGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTGIIDIAMIQSLARGGVVDDLV AGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPVRFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFS RSTRRLPLTRLATL
Sequences:
>Translated_654_residues MSYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAHRSPHLAGGVSVTNASSPATK IALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPRICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPL LTDETCWFLAVDFDKATWTNDSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVRRMTLTEATAVAEEAGRQGRV TGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVLADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLST FGLPRIIACAELLSHHMALPRGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTGIIDIAMIQSLARGGVVDDLV AGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPVRFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFS RSTRRLPLTRLATL >Mature_653_residues SYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAHRSPHLAGGVSVTNASSPATKI ALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPRICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPLL TDETCWFLAVDFDKATWTNDSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDIG FSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVRRMTLTEATAVAEEAGRQGRVT GLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVLADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLSTF GLPRIIACAELLSHHMALPRGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAATT GFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTGIIDIAMIQSLARGGVVDDLVA GYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPVRFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFSR STRRLPLTRLATL
Specific function: Unknown
COG id: COG4951
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71678; Mature: 71547
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAH CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RSPHLAGGVSVTNASSPATKIALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPR CCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH ICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPLLTDETCWFLAVDFDKATWTN HCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCC DSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI CHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVR CCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH RMTLTEATAVAEEAGRQGRVTGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVL HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEE ADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLSTFGLPRIIACAELLSHHMALP HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC RGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTG CCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC IIDIAMIQSLARGGVVDDLVAGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCE RFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFSRSTRRLPLTRLATL EEEECCHHHHHCCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHCC >Mature Secondary Structure SYRMVTEGRAVTRDQPNLLGTTERDREIAALRERLARLESEKAELQANLKRLISAPEAH CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RSPHLAGGVSVTNASSPATKIALFRSLFRGRHDVFPKRWENAKTGKAGYAPACANEWMPR CCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHH ICGKPKAKCGDCPHHAFLPVTDDVIGGHLRGHHTIGVYPLLTDETCWFLAVDFDKATWTN HCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCC DSAAFLQACSARGIPAALERSRSGQGAHVWIFFAEPVTAAIARRLGAHLITETMERNPDI CHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC GFSSYDRFFPSQDSMPAGGFGNLIALPLQHDPRSTGNSLFLDETTFEPYSDQWAFLATVR CCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH RMTLTEATAVAEEAGRQGRVTGLHLPLDEEDDAPWAVPPSRRKPEISITGPMPDRIDVVL HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEE ADQIYMQREGLPASLVNRLIRLAAFQNPAFYSAQAMRLSTFGLPRIIACAELLSHHMALP HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCC RGCREGLAELASGLNVDLRWQDKRNAGADIQARFLGTLTKEQKTAVTALLAHETGVLAAT HHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE TGFGKTVVAAAMIAERKASTLILVHRRQLMEQWATRLQSFLDLPQHSIGQVGGGARKPTG CCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC IIDIAMIQSLARGGVVDDLVAGYGQLIVDECHHLSAVSFEAVVTRKDGHHTIIFMQCGPV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCE RFRVDAKSQAARRPFGLASCGAEHSSCFHLSSSTIVRRFSRSTRRLPLTRLATL EEEECCHHHHHCCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA