| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342596
Identifier: 146342596
GI number: 146342596
Start: 5961993
End: 5963141
Strand: Direct
Name: 146342596
Synonym: BRADO5759
Alternate gene names: NA
Gene position: 5961993-5963141 (Clockwise)
Preceding gene: 146342593
Following gene: 146342602
Centisome position: 79.96
GC content: 65.71
Gene sequence:
>1149_bases ATGATGAGAGCTGCGCTCACTGTGCTCGGCCTGGGCTTGACGATGGCGCTCGGCACGCCGGCGCAGGCCGACATCAAGGT CGGTATCGTGGTGTCCGCGACCGGCCCCGGCTCGGCGCTCGGACAGCCGCAGATCAAGGCGGTCGCTGCGCTGCCGAAGG AGATCGGCGGCGAGAAGATCGTCTACATCGCGCTCGACGACGAATCCGACAGCGTCAAGGGCCTGCAGAACGCGCGCCGG CTGGTGATCCAGGACGGCGTCGACGTCATCATCGGCTCGTCGCTGACGCCGGTCACGATGCCGATGCTCGACGTCGCGCT GGAGAGCCGGACGCCGTTATTGTCGCTCGCGGCCTCGACCGCGATCGTGCAGCCGATGGACGACAAGCGGAAATGGGCGT TCAAGGTCGTGCCCAACGACGACCTCATGGCCGCGGCGATGCTGAAATACATCGCCAGGAGCGGCGTCAAGACATTGGGC TTCATCGGGGTCTCCGACGGCTACGGCGAGGGCTACTATCAGGAGGTGACGAAGCTGGCGCCGAAGCTCGGCATCACCGT CACGACCCATGAGGTGTATGCGCGCGGTGACACCAGCGCGAGCGGTCAGGCGCTGAAGGTGATCGCGACCAATCCGGACG CGGTGTTCATCGCCTCAGCCGGCACGCCGGCGGTGCTGCCGCAGCAGGCGCTACGCGAGCGCGGCTATCAGGGTAAGATC TTCCAGACCCATGGCGTGGCGACACAGGAGTTCATCAAGCTCGGCAAGGACAGCGTCGAGGGCGCGATCTTCGCCGGCGA GGCGTTCTCGATCGCCGACGATCTCGCGCCCGAGGATCCGTTCCGCCGCGCCAACGACGCCTTCGTGTCGGCCTATCAGG CCGCCAACGGCGACAGGCCGAACATCTTCGCCGCACATCTCTGGGACACGGTGACGCTGTTGAAAGGCGCCATCCCCGGC GCGCTGAAGGCCGCCAAGCCGGGCACGCCCGAGTTCCGCGCCGCATTGCGCGACGAGCTTGAGCGCGGCAAGGACGTCTA TCTCAACAACGGCCTCTCCACCATGAGCCCGACTGATCATAACGGCTATGATGAGCGCTCGGCGTTTCTGATCAAGGTCG AGGGCGGGAAATTCAGGCTGGTGAAGTAG
Upstream 100 bases:
>100_bases CCATGGGGACAGACGCGCCGCGGCGGCAGGGCTAGGCTTCGCGGCTCGAAGTCCCGGCCGATCAACGCGCCGGGCACGCC ACGCCCAACAGGGAGAAACC
Downstream 100 bases:
>100_bases GCAAGCTCGTGATCGAAAGCATAGTCTGCCGCGCAGGCGGTGCACTCCCCTCCCCCCTGCGGGGAGGGGTCGGGGGGGGG TCCACGAGTCCGACTATCAA
Product: putative amino-acid ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKIVYIALDDESDSVKGLQNARR LVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAASTAIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLG FIGVSDGYGEGYYQEVTKLAPKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRPNIFAAHLWDTVTLLKGAIPG ALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDHNGYDERSAFLIKVEGGKFRLVK
Sequences:
>Translated_382_residues MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKIVYIALDDESDSVKGLQNARR LVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAASTAIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLG FIGVSDGYGEGYYQEVTKLAPKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRPNIFAAHLWDTVTLLKGAIPG ALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDHNGYDERSAFLIKVEGGKFRLVK >Mature_382_residues MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKIVYIALDDESDSVKGLQNARR LVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAASTAIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLG FIGVSDGYGEGYYQEVTKLAPKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRPNIFAAHLWDTVTLLKGAIPG ALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDHNGYDERSAFLIKVEGGKFRLVK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40444; Mature: 40444
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKI CCHHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE VYIALDDESDSVKGLQNARRLVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAAST EEEEECCCCCHHHHHHHHHEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH AIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLGFIGVSDGYGEGYYQEVTKLA HEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH PKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI HHCCEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCCCCCE FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRP EEECCCCHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCC NIFAAHLWDTVTLLKGAIPGALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDH CEEHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC NGYDERSAFLIKVEGGKFRLVK CCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure MMRAALTVLGLGLTMALGTPAQADIKVGIVVSATGPGSALGQPQIKAVAALPKEIGGEKI CCHHHHHHHHHHHHEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE VYIALDDESDSVKGLQNARRLVIQDGVDVIIGSSLTPVTMPMLDVALESRTPLLSLAAST EEEEECCCCCHHHHHHHHHEEEEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH AIVQPMDDKRKWAFKVVPNDDLMAAAMLKYIARSGVKTLGFIGVSDGYGEGYYQEVTKLA HEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHH PKLGITVTTHEVYARGDTSASGQALKVIATNPDAVFIASAGTPAVLPQQALRERGYQGKI HHCCEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHCCCCCCE FQTHGVATQEFIKLGKDSVEGAIFAGEAFSIADDLAPEDPFRRANDAFVSAYQAANGDRP EEECCCCHHHHHHCCCCCCCCEEEECCCHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCC NIFAAHLWDTVTLLKGAIPGALKAAKPGTPEFRAALRDELERGKDVYLNNGLSTMSPTDH CEEHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC NGYDERSAFLIKVEGGKFRLVK CCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]