| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342341
Identifier: 146342341
GI number: 146342341
Start: 5679153
End: 5679929
Strand: Reverse
Name: 146342341
Synonym: BRADO5497
Alternate gene names: NA
Gene position: 5679929-5679153 (Counterclockwise)
Preceding gene: 146342342
Following gene: 146342338
Centisome position: 76.17
GC content: 64.61
Gene sequence:
>777_bases ATGGCCCGCAAGCTGATCGACATCTCCGTGCCGCTGCAGAACGACGTGCCGGCCGATCCGCCTGGTAATCATCCGACCAT CACCTATATCGACCACCAGCAGGGACTGCCGCGCATGCTGCAGTTCTTTGATGGGCTGAAGGCCGAGGACCTGCCGGACG GGCAGGGCTGGGCGGTCGAGCAGGTCAATTTGTCGACGCATAACGGCACCCATCTCGACGCGCCCTGGCACTTTCATCCG ACGATGAATCGCGGCGAGCGCGCCTGGACCATCGACGAGGTGCCGCTGGACTGGTGCCTGCAGCCGGGCGTGAAACTCGA CTTCCGGCATTTTCCCGATGGCTATGTGGTGACGGCAAAGGACGTCGAGGCCGAGCTGAAACGCATCGGCCACACGCTGT CGCCGCTCGAGATCGTTGTGGTCAACACCTCCGCCGGCGCGCGCTTCGGGCAGGCGAACTACGTCAACTCCGGCTGTGGG ATGGGCTATGAGGCGACGATGTATCTCCTCGAGCGCGGCGTCCGGTTGACCGGCACCGACGGCTGGAGCTGGGATGCGCC GTTCGTGTTCACAGCGCAGAAATATGCCGAGACCCACGACGCGGCGCTGATCTGGGAAGGCCACAAGGCCGGCCGCCACA TCGGCTATTGCCACCTCGAGAAGCTGCACAATCTGGAGCAGCTGCCGCCGACCGGGTTCATGGTGTCGTGCTTCCCGGTC AAGATCGAGCGCGCGTCCGCTGGATGGACGCGCGCGGTGGCGATCGTGGAGGAGTGA
Upstream 100 bases:
>100_bases GAGGTCGAGAAGATCGGCATCCTGAAGAACAGGGTCGAGCGGCAGGACGTCTGACACGACCGGCGATGACAACCAAGAAC GACAAGAGAGAGGACCGCCC
Downstream 100 bases:
>100_bases GGGCAAAAAGCCGAGCTGAAATCTCAGACAGTGCTGTGATTTGATCACAGCTCGCGCGGCGACGGTGGTGTACCTCGCCC CGCTGGCTGGAAGAGGTCGG
Product: putative cyclase
Products: NA
Alternate protein names: Cyclase; Polyketide Cyclase; Cyclase Superfamily; Arylformamidase; Cyclase Superfamily Protein
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MARKLIDISVPLQNDVPADPPGNHPTITYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVEQVNLSTHNGTHLDAPWHFHP TMNRGERAWTIDEVPLDWCLQPGVKLDFRHFPDGYVVTAKDVEAELKRIGHTLSPLEIVVVNTSAGARFGQANYVNSGCG MGYEATMYLLERGVRLTGTDGWSWDAPFVFTAQKYAETHDAALIWEGHKAGRHIGYCHLEKLHNLEQLPPTGFMVSCFPV KIERASAGWTRAVAIVEE
Sequences:
>Translated_258_residues MARKLIDISVPLQNDVPADPPGNHPTITYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVEQVNLSTHNGTHLDAPWHFHP TMNRGERAWTIDEVPLDWCLQPGVKLDFRHFPDGYVVTAKDVEAELKRIGHTLSPLEIVVVNTSAGARFGQANYVNSGCG MGYEATMYLLERGVRLTGTDGWSWDAPFVFTAQKYAETHDAALIWEGHKAGRHIGYCHLEKLHNLEQLPPTGFMVSCFPV KIERASAGWTRAVAIVEE >Mature_257_residues ARKLIDISVPLQNDVPADPPGNHPTITYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVEQVNLSTHNGTHLDAPWHFHPT MNRGERAWTIDEVPLDWCLQPGVKLDFRHFPDGYVVTAKDVEAELKRIGHTLSPLEIVVVNTSAGARFGQANYVNSGCGM GYEATMYLLERGVRLTGTDGWSWDAPFVFTAQKYAETHDAALIWEGHKAGRHIGYCHLEKLHNLEQLPPTGFMVSCFPVK IERASAGWTRAVAIVEE
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28807; Mature: 28676
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKLIDISVPLQNDVPADPPGNHPTITYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE CCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEE QVNLSTHNGTHLDAPWHFHPTMNRGERAWTIDEVPLDWCLQPGVKLDFRHFPDGYVVTAK EEEEECCCCCEECCCEEECCCCCCCCEEEEECCCCHHHHCCCCCEEEEEECCCCEEEEEH DVEAELKRIGHTLSPLEIVVVNTSAGARFGQANYVNSGCGMGYEATMYLLERGVRLTGTD HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECC GWSWDAPFVFTAQKYAETHDAALIWEGHKAGRHIGYCHLEKLHNLEQLPPTGFMVSCFPV CCCCCCCEEEEEHHHCCCCCEEEEECCCCCCCCCCEEEHHHHHCHHHCCCCCEEEEEEEE KIERASAGWTRAVAIVEE EEEECCCCCEEEEEEEEC >Mature Secondary Structure ARKLIDISVPLQNDVPADPPGNHPTITYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE CCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEE QVNLSTHNGTHLDAPWHFHPTMNRGERAWTIDEVPLDWCLQPGVKLDFRHFPDGYVVTAK EEEEECCCCCEECCCEEECCCCCCCCEEEEECCCCHHHHCCCCCEEEEEECCCCEEEEEH DVEAELKRIGHTLSPLEIVVVNTSAGARFGQANYVNSGCGMGYEATMYLLERGVRLTGTD HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECC GWSWDAPFVFTAQKYAETHDAALIWEGHKAGRHIGYCHLEKLHNLEQLPPTGFMVSCFPV CCCCCCCEEEEEHHHCCCCCEEEEECCCCCCCCCCEEEHHHHHCHHHCCCCCEEEEEEEE KIERASAGWTRAVAIVEE EEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA