| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livM [C]
Identifier: 146341679
GI number: 146341679
Start: 4978410
End: 4979462
Strand: Reverse
Name: livM [C]
Synonym: BRADO4784
Alternate gene names: 146341679
Gene position: 4979462-4978410 (Counterclockwise)
Preceding gene: 146341680
Following gene: 146341678
Centisome position: 66.78
GC content: 64.67
Gene sequence:
>1053_bases TTGCTGTCAGGCGGCGCGGCGGAGCGGCCCGCCACATGGTCCGTGACCGAGCAGCCCTGGGCATGGGCGCTGGCGGCGCT GTTGCTGATCCTTCCCGTCATCGCCAACGGATTTTTCCTGATCGAGATCTTCGGCACGACGCTGATCCTGGGGACCATCG CGCTGAGCCTGATGTTCCTTGCGGGTTACGGCGGCATGGTCAGCCTGATGCAACTGACCATCGCCGGCTTTGCCGGCTAC ATGGTCGCGGTGTTCGGGGTCAGCGGCAACGCCAATATCAGCCTGGGCTGGCCGTGGTGGCTGGCGACGCCGGTGGCGCT GGTGCTCGCGGTGCTGTTCGGTACGCTCGGCGGCGCACTGGCGGTGCGCACCGAAGGCATCTACACCATCATGATCACGC TCGCGATCGGCGCGGCGTTCTACTATTTCACCAATCAGAACTGGGCGATCTTCAACGGCCACACCGGCATCAACACGATC GCAACGCCGCACTTTCTCGGCATCGATTGGCGCGCCGATGTCGCATTCTACTACCTGATCCTGGCCGTGGCGGCGCTGTG CTATTTCGTCGTGGTGTATCTGTCGCGTGCGCCGTTTGGACTGGCCCTTCAGGGCGTTCGCGATAACCCCAGGCGCATGG CCGCGCTCGGCTTCAACGTCAATGCGCATCGCATCGCGGCCTATGCCTTTGCCGCCTTGATCGCCGGGCTTGGCGGCGTG CTGCAGGTCTGGAACTACCGGCAGATCTCGCCGGGCTCGGTGGCGGTCGAACGCTGCATCGACATTCTCATCGTGGCGGT CGTTGGGGGCATCACGCGACCGGTCGGGCCTTATATCGGCGCCTTCATCTTCGTGATCCTTCGCACCTTCGCGCTGGACT TCCTGGTCAAGGTCGGACTCGACGGCAACAGGTTTCGCCTGCTGATCGGCCTCGGCTTCCTCGCCATCGTGTTCTGGTCC TCCGACGGCGTCATCGGCCTGTATGAGCGATGGCGCCGGCGCGGCGAGCGGAAGGAGACGCGGCCGCGTTCCGGAGGTCA CGGCCATGGATAG
Upstream 100 bases:
>100_bases ACGTTCCTGATCATGGTCCTGGTCCTGGCGCTGCGGCCGCAGGGCCTGCTGGCGAGGCGGTGAGATGTCGCTGATCCAGG AGGCGCGGGCGAGGGAGGGC
Downstream 100 bases:
>100_bases GGTGGCGGACCGGCTTTCGGCCCTCGGCTCGACCGCCGCGCTCGAGCTCCGCGGCGTCACCCGGATGTTCGGCGCGCTGG CGGCGTTGACCGACATCACC
Product: putative ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease Protein; Branched-Chain Amino Acid Transport Permease; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease; ABC Transporter ; Branched-Chain Amino Acid ABC Transporter; Branched Chain Amino Acid ABC Transporter Permease; Amino Acid Or Sugar ABC Transport System Permease Protein; Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein; Permease Component Of ABC Transporter; Branched Chain Amino Acid ABC Transporter; ABC-Transporter; Branched-Chain Amino Acid ABC Transporter ATPase; Permease Abc Transporter Protein; ABC Transporter; ABC-Type Transporter Permease Component; Transmembrane Abc Transporter Protein; ABC TRANSPORTER Membrane Component; ABC Transporter-Like Protein; ABC-Type Branched-Chain Amino Acid Transport System; Branched-Chain Amino Acid Transport System Permease; Amino Acid/Amide ABC Transporter Membrane HAAT Family; Branched-Chain Amino Acid ABC Transport System Permease; ABC-Transporter Permease Protein
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MLSGGAAERPATWSVTEQPWAWALAALLLILPVIANGFFLIEIFGTTLILGTIALSLMFLAGYGGMVSLMQLTIAGFAGY MVAVFGVSGNANISLGWPWWLATPVALVLAVLFGTLGGALAVRTEGIYTIMITLAIGAAFYYFTNQNWAIFNGHTGINTI ATPHFLGIDWRADVAFYYLILAVAALCYFVVVYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGV LQVWNYRQISPGSVAVERCIDILIVAVVGGITRPVGPYIGAFIFVILRTFALDFLVKVGLDGNRFRLLIGLGFLAIVFWS SDGVIGLYERWRRRGERKETRPRSGGHGHG
Sequences:
>Translated_350_residues MLSGGAAERPATWSVTEQPWAWALAALLLILPVIANGFFLIEIFGTTLILGTIALSLMFLAGYGGMVSLMQLTIAGFAGY MVAVFGVSGNANISLGWPWWLATPVALVLAVLFGTLGGALAVRTEGIYTIMITLAIGAAFYYFTNQNWAIFNGHTGINTI ATPHFLGIDWRADVAFYYLILAVAALCYFVVVYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGV LQVWNYRQISPGSVAVERCIDILIVAVVGGITRPVGPYIGAFIFVILRTFALDFLVKVGLDGNRFRLLIGLGFLAIVFWS SDGVIGLYERWRRRGERKETRPRSGGHGHG >Mature_350_residues MLSGGAAERPATWSVTEQPWAWALAALLLILPVIANGFFLIEIFGTTLILGTIALSLMFLAGYGGMVSLMQLTIAGFAGY MVAVFGVSGNANISLGWPWWLATPVALVLAVLFGTLGGALAVRTEGIYTIMITLAIGAAFYYFTNQNWAIFNGHTGINTI ATPHFLGIDWRADVAFYYLILAVAALCYFVVVYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGV LQVWNYRQISPGSVAVERCIDILIVAVVGGITRPVGPYIGAFIFVILRTFALDFLVKVGLDGNRFRLLIGLGFLAIVFWS SDGVIGLYERWRRRGERKETRPRSGGHGHG
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37813; Mature: 37813
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGGAAERPATWSVTEQPWAWALAALLLILPVIANGFFLIEIFGTTLILGTIALSLMFL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH AGYGGMVSLMQLTIAGFAGYMVAVFGVSGNANISLGWPWWLATPVALVLAVLFGTLGGAL HCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEE AVRTEGIYTIMITLAIGAAFYYFTNQNWAIFNGHTGINTIATPHFLGIDWRADVAFYYLI EEECCCHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHH LAVAALCYFVVVYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGV HHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHCCHHH LQVWNYRQISPGSVAVERCIDILIVAVVGGITRPVGPYIGAFIFVILRTFALDFLVKVGL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DGNRFRLLIGLGFLAIVFWSSDGVIGLYERWRRRGERKETRPRSGGHGHG CCCCEEHHHHHHHHHHHEECCCCEEHHHHHHHHCCCCHHCCCCCCCCCCC >Mature Secondary Structure MLSGGAAERPATWSVTEQPWAWALAALLLILPVIANGFFLIEIFGTTLILGTIALSLMFL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH AGYGGMVSLMQLTIAGFAGYMVAVFGVSGNANISLGWPWWLATPVALVLAVLFGTLGGAL HCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEE AVRTEGIYTIMITLAIGAAFYYFTNQNWAIFNGHTGINTIATPHFLGIDWRADVAFYYLI EEECCCHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHH LAVAALCYFVVVYLSRAPFGLALQGVRDNPRRMAALGFNVNAHRIAAYAFAALIAGLGGV HHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHCCHHH LQVWNYRQISPGSVAVERCIDILIVAVVGGITRPVGPYIGAFIFVILRTFALDFLVKVGL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC DGNRFRLLIGLGFLAIVFWSSDGVIGLYERWRRRGERKETRPRSGGHGHG CCCCEEHHHHHHHHHHHEECCCCEEHHHHHHHHCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA