| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gnl [H]
Identifier: 146341664
GI number: 146341664
Start: 4961416
End: 4963005
Strand: Reverse
Name: gnl [H]
Synonym: BRADO4769
Alternate gene names: 146341664
Gene position: 4963005-4961416 (Counterclockwise)
Preceding gene: 146341665
Following gene: 146341663
Centisome position: 66.56
GC content: 66.79
Gene sequence:
>1590_bases ATGACCCACGTCACCTTGCGCCCCGAGTTTGAGAGCCTGATCGATCCCTACGCGCCGGTGGCGCAGGTCGCGACCGGCTT CGAGTTCACGGAGGGGCCGATCTGGCATCCCGCCGAGCAGTTCCTGCTGTTCTCCGACATGCCGGCCGATGTCAGGCGAC GCTGGGACGCCAGGCGCGGCGTCGTCGAGATGCGGCGGCCTTCGAACAAGTGCAACGGCATGACCTACGATGCCGAGCTC AATCTCATCGTCTGCGAGCACGCGACGTCATCGCTGGTGCGCGAGCGCCCCGACGGGCGCCGCGAGGTCCTCGCTTCGCA CTATGAGAACCAGGAGCTCAACAGCCCCAACGATGTCTGCGTTCATTCCAGCGGCGCGATGTATTTTTCCGATCCCTGGT ATGGCCGCATGCCGGTCTATGGCGTCGAGCGGCCGCGCCAGCTCGGCTTCCAGGGCGTCTTTCGTGTGCCGCCTGGCGGC GGTGCGCCGCAGCTGCTCGTCGATCGCCATCTGTTCGATCAGCCCAACGGGCTGTGTTTCTCGCCTGACGAGAAGCTGCT CTATGTCAACGACACGGTGCAGGCGCTGATCCGTGTGTTCGATGTCGGCAGCGACGGCGCGCTGTCGCACGGTCGCGTCT TCGCCAGCGGCATCCGCTCTGAACTCGAGCCGGGCGTGCCCGACGGCATGAAATGCGATCAGCGCGGCAATGTCTGGGTC ACCGCGCCTGGCGGGGCCTGGGTCTACGCGCCGACAGGCGAGCTGCTCGGCAAGGTGCGCGTGCCGGAGCTGGTGGCTAA TCTGGCCTGGGGCGGTGATGATTTCCGGACGCTGTATCTCACGGCGACGCATTCGGTCTACGCGATCAAGACCAAGGTCG GTCCACGCCACGAGCCGTATATGAGCGCGCGGCGTACGGCCGAGACGATATCGTCGGCATCGGTCGCGTCGGCGACTGCC GCGCCTCCGCTGCTCGCCTCCGGCGACATGCAGCTCGATCCGCGTCGCTGCGCCATGATCATCCAGGACCTGCAGAACGA CGTCATCATGGAGGGCGGCGCCTTTGCCGACTCCGGCGCGCCAGGACATGCCAAGCAGCAGCGCGTCGTCGACAACGTCC GCCGGCTCGCCGAGGTGGCGCGCGCGCGCGGCGTCGTCATCATCCATGTGTGGTTCGTGGTCGAGCCGGGCGCGCCCGGC GTGACCCTGAACGCGCCGCTGTTCGAAGGGCTGGTCGACAGCAGGGCCATGGTGAGAGGCAGCTGGGGCGCGGCGCCCGT CGCCGGCCTCGAACCGCGCAGTGGCGACTTCGTGGTCGAGAAGATGCGGATGAGCGCGTGGGAGGGGACACGGCTCGAGA CCATCCTGAAGGCGACCGGGCGCGACATCATCATCAACACCGGTGCCTGGACCAACATGTCGGTCGAGCACACCGCGCGC ACTGGCGCCGACAAGGGCTACTTCATGGTGGTGCCGGAGGACTGCTGCTCGACCATGAATGCGGACTGGCACAATGCGTC GGTCAACTTCGCCTTGCAGAACGTGTCGGTCGTCACCCGGGCCGATGACGTCATCAAGGCGCTGGGGTAG
Upstream 100 bases:
>100_bases CGAGGGCGGAGTGGTGACGGGGCGGCTGCATGACCAGGTGCCGGGCCCGGTCGTGCAGTCGCTGCCGCAGCGGCATTGGT TTCCGGCGTGAGGACGCGTC
Downstream 100 bases:
>100_bases GGGATGCCCAAGCTGCTCCATCTCGCCGCCTCGCCGCGCGCGGATTCGGAATCCGGCGCGGCTTCACGCGTCTTTCTCGA CCGCTTCAGGCAGGCCCGGC
Product: putative gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MTHVTLRPEFESLIDPYAPVAQVATGFEFTEGPIWHPAEQFLLFSDMPADVRRRWDARRGVVEMRRPSNKCNGMTYDAEL NLIVCEHATSSLVRERPDGRREVLASHYENQELNSPNDVCVHSSGAMYFSDPWYGRMPVYGVERPRQLGFQGVFRVPPGG GAPQLLVDRHLFDQPNGLCFSPDEKLLYVNDTVQALIRVFDVGSDGALSHGRVFASGIRSELEPGVPDGMKCDQRGNVWV TAPGGAWVYAPTGELLGKVRVPELVANLAWGGDDFRTLYLTATHSVYAIKTKVGPRHEPYMSARRTAETISSASVASATA APPLLASGDMQLDPRRCAMIIQDLQNDVIMEGGAFADSGAPGHAKQQRVVDNVRRLAEVARARGVVIIHVWFVVEPGAPG VTLNAPLFEGLVDSRAMVRGSWGAAPVAGLEPRSGDFVVEKMRMSAWEGTRLETILKATGRDIIINTGAWTNMSVEHTAR TGADKGYFMVVPEDCCSTMNADWHNASVNFALQNVSVVTRADDVIKALG
Sequences:
>Translated_529_residues MTHVTLRPEFESLIDPYAPVAQVATGFEFTEGPIWHPAEQFLLFSDMPADVRRRWDARRGVVEMRRPSNKCNGMTYDAEL NLIVCEHATSSLVRERPDGRREVLASHYENQELNSPNDVCVHSSGAMYFSDPWYGRMPVYGVERPRQLGFQGVFRVPPGG GAPQLLVDRHLFDQPNGLCFSPDEKLLYVNDTVQALIRVFDVGSDGALSHGRVFASGIRSELEPGVPDGMKCDQRGNVWV TAPGGAWVYAPTGELLGKVRVPELVANLAWGGDDFRTLYLTATHSVYAIKTKVGPRHEPYMSARRTAETISSASVASATA APPLLASGDMQLDPRRCAMIIQDLQNDVIMEGGAFADSGAPGHAKQQRVVDNVRRLAEVARARGVVIIHVWFVVEPGAPG VTLNAPLFEGLVDSRAMVRGSWGAAPVAGLEPRSGDFVVEKMRMSAWEGTRLETILKATGRDIIINTGAWTNMSVEHTAR TGADKGYFMVVPEDCCSTMNADWHNASVNFALQNVSVVTRADDVIKALG >Mature_528_residues THVTLRPEFESLIDPYAPVAQVATGFEFTEGPIWHPAEQFLLFSDMPADVRRRWDARRGVVEMRRPSNKCNGMTYDAELN LIVCEHATSSLVRERPDGRREVLASHYENQELNSPNDVCVHSSGAMYFSDPWYGRMPVYGVERPRQLGFQGVFRVPPGGG APQLLVDRHLFDQPNGLCFSPDEKLLYVNDTVQALIRVFDVGSDGALSHGRVFASGIRSELEPGVPDGMKCDQRGNVWVT APGGAWVYAPTGELLGKVRVPELVANLAWGGDDFRTLYLTATHSVYAIKTKVGPRHEPYMSARRTAETISSASVASATAA PPLLASGDMQLDPRRCAMIIQDLQNDVIMEGGAFADSGAPGHAKQQRVVDNVRRLAEVARARGVVIIHVWFVVEPGAPGV TLNAPLFEGLVDSRAMVRGSWGAAPVAGLEPRSGDFVVEKMRMSAWEGTRLETILKATGRDIIINTGAWTNMSVEHTART GADKGYFMVVPEDCCSTMNADWHNASVNFALQNVSVVTRADDVIKALG
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081820, Length=196, Percent_Identity=31.6326530612245, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87081992, Length=202, Percent_Identity=29.2079207920792, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 57874; Mature: 57743
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHVTLRPEFESLIDPYAPVAQVATGFEFTEGPIWHPAEQFLLFSDMPADVRRRWDARRG CCEEEECCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHCC VVEMRRPSNKCNGMTYDAELNLIVCEHATSSLVRERPDGRREVLASHYENQELNSPNDVC HHHHCCCCCCCCCEEEECEEEEEEECCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEE VHSSGAMYFSDPWYGRMPVYGVERPRQLGFQGVFRVPPGGGAPQLLVDRHLFDQPNGLCF EECCCCEEECCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEE SPDEKLLYVNDTVQALIRVFDVGSDGALSHGRVFASGIRSELEPGVPDGMKCDQRGNVWV CCCCCEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE TAPGGAWVYAPTGELLGKVRVPELVANLAWGGDDFRTLYLTATHSVYAIKTKVGPRHEPY ECCCCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCCCHH MSARRTAETISSASVASATAAPPLLASGDMQLDPRRCAMIIQDLQNDVIMEGGAFADSGA HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCC PGHAKQQRVVDNVRRLAEVARARGVVIIHVWFVVEPGAPGVTLNAPLFEGLVDSRAMVRG CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCEEECCHHHHHHHCCCHHEEC SWGAAPVAGLEPRSGDFVVEKMRMSAWEGTRLETILKATGRDIIINTGAWTNMSVEHTAR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCEEHHHHC TGADKGYFMVVPEDCCSTMNADWHNASVNFALQNVSVVTRADDVIKALG CCCCCCEEEEECHHHHCCCCCCCCCCEEEEEEECEEEEEHHHHHHHHCC >Mature Secondary Structure THVTLRPEFESLIDPYAPVAQVATGFEFTEGPIWHPAEQFLLFSDMPADVRRRWDARRG CEEEECCCHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHCC VVEMRRPSNKCNGMTYDAELNLIVCEHATSSLVRERPDGRREVLASHYENQELNSPNDVC HHHHCCCCCCCCCEEEECEEEEEEECCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEE VHSSGAMYFSDPWYGRMPVYGVERPRQLGFQGVFRVPPGGGAPQLLVDRHLFDQPNGLCF EECCCCEEECCCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCEE SPDEKLLYVNDTVQALIRVFDVGSDGALSHGRVFASGIRSELEPGVPDGMKCDQRGNVWV CCCCCEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEE TAPGGAWVYAPTGELLGKVRVPELVANLAWGGDDFRTLYLTATHSVYAIKTKVGPRHEPY ECCCCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCCCHH MSARRTAETISSASVASATAAPPLLASGDMQLDPRRCAMIIQDLQNDVIMEGGAFADSGA HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCEEECCCCCCCCCC PGHAKQQRVVDNVRRLAEVARARGVVIIHVWFVVEPGAPGVTLNAPLFEGLVDSRAMVRG CCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCEEECCHHHHHHHCCCHHEEC SWGAAPVAGLEPRSGDFVVEKMRMSAWEGTRLETILKATGRDIIINTGAWTNMSVEHTAR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCEEHHHHC TGADKGYFMVVPEDCCSTMNADWHNASVNFALQNVSVVTRADDVIKALG CCCCCCEEEEECHHHHCCCCCCCCCCEEEEEEECEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]