| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341665
Identifier: 146341665
GI number: 146341665
Start: 4963015
End: 4963863
Strand: Reverse
Name: 146341665
Synonym: BRADO4770
Alternate gene names: NA
Gene position: 4963863-4963015 (Counterclockwise)
Preceding gene: 146341666
Following gene: 146341664
Centisome position: 66.57
GC content: 63.96
Gene sequence:
>849_bases ATGGCGCTGGAAATCAAGGTTCTCGACTATGGTGATATCGAGCTGGAATCCAGCTTCCTCGTGCTCGGCCGCGACTGCGG CCGCACCCGCCGGGTGCTGACGCTCGGCTTCCTGATCCTGGGCGGGCCTTACCCTGTCGTGGTCGACACCGGCTACCGCT CCAACCAGATCATGGAGACGCTGGGCATGCGCGGGCTGCAGTATCATGAGAACATGATCGAGAACCAGCTGGCGCGCCAC GGCGTGCGCATGGGCGACGTCCGCTACGTCTGCCATACGCACCTGCACATCGATCACGCCGGCAAGGACGATCTGTTCCC GATGAACACGACGGTGGTGCTGAACCGCCGCGAGTTGGAATATTCCGTCTCCGGCCTGATGCATCCGCAATATCCGGCGC CCGACATCAAGCACCTGATCGACCGGCTGCACACCAAGAGCGCGTTGCGCTTTCTCGACCTCGAGCTGACAGGGCCCGTC GAGCTGATGCCGGGCGTCTACTGCGACGCTGCAAACGCCCACACCGAGGGCTCGATGAACATCCACGTCCACACCGCCGA CGGCATCGCCACCATCTGCGGCGACGTCATCTACGACTTCAACGACCAGATCGTCACGCCGTTCAACGAGATCCAGCACG CCGAGCCGCGCACGACAGGCAATCACGGCACCTCCAAGCGCGCAGAGAAGGCGGCAATCAAGAAGCTGCTGTCGAGCTCG CGCTATCTGCTGCCGGTGCATGATCGTCCCGCCAAGATCGAGGGCGGAGTGGTGACGGGGCGGCTGCATGACCAGGTGCC GGGCCCGGTCGTGCAGTCGCTGCCGCAGCGGCATTGGTTTCCGGCGTGA
Upstream 100 bases:
>100_bases CAAGCACGCGCAAGTGCAGGTGATGGGAGAAACCGCGCGGCGGGTCTATCGGCTGGGATGACGCCGCACGCAACGACAAC AAAAGCAACAGGAAACGGTC
Downstream 100 bases:
>100_bases GGACGCGTCATGACCCACGTCACCTTGCGCCCCGAGTTTGAGAGCCTGATCGATCCCTACGCGCCGGTGGCGCAGGTCGC GACCGGCTTCGAGTTCACGG
Product: putative Zn-dependent hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MALEIKVLDYGDIELESSFLVLGRDCGRTRRVLTLGFLILGGPYPVVVDTGYRSNQIMETLGMRGLQYHENMIENQLARH GVRMGDVRYVCHTHLHIDHAGKDDLFPMNTTVVLNRRELEYSVSGLMHPQYPAPDIKHLIDRLHTKSALRFLDLELTGPV ELMPGVYCDAANAHTEGSMNIHVHTADGIATICGDVIYDFNDQIVTPFNEIQHAEPRTTGNHGTSKRAEKAAIKKLLSSS RYLLPVHDRPAKIEGGVVTGRLHDQVPGPVVQSLPQRHWFPA
Sequences:
>Translated_282_residues MALEIKVLDYGDIELESSFLVLGRDCGRTRRVLTLGFLILGGPYPVVVDTGYRSNQIMETLGMRGLQYHENMIENQLARH GVRMGDVRYVCHTHLHIDHAGKDDLFPMNTTVVLNRRELEYSVSGLMHPQYPAPDIKHLIDRLHTKSALRFLDLELTGPV ELMPGVYCDAANAHTEGSMNIHVHTADGIATICGDVIYDFNDQIVTPFNEIQHAEPRTTGNHGTSKRAEKAAIKKLLSSS RYLLPVHDRPAKIEGGVVTGRLHDQVPGPVVQSLPQRHWFPA >Mature_281_residues ALEIKVLDYGDIELESSFLVLGRDCGRTRRVLTLGFLILGGPYPVVVDTGYRSNQIMETLGMRGLQYHENMIENQLARHG VRMGDVRYVCHTHLHIDHAGKDDLFPMNTTVVLNRRELEYSVSGLMHPQYPAPDIKHLIDRLHTKSALRFLDLELTGPVE LMPGVYCDAANAHTEGSMNIHVHTADGIATICGDVIYDFNDQIVTPFNEIQHAEPRTTGNHGTSKRAEKAAIKKLLSSSR YLLPVHDRPAKIEGGVVTGRLHDQVPGPVVQSLPQRHWFPA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31525; Mature: 31393
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEIKVLDYGDIELESSFLVLGRDCGRTRRVLTLGFLILGGPYPVVVDTGYRSNQIMET CEEEEEEECCCCEEECCCEEEEECCCCCHHHHHHHHHHEECCCEEEEEECCCCCHHHHHH LGMRGLQYHENMIENQLARHGVRMGDVRYVCHTHLHIDHAGKDDLFPMNTTVVLNRRELE HCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEECHHHH YSVSGLMHPQYPAPDIKHLIDRLHTKSALRFLDLELTGPVELMPGVYCDAANAHTEGSMN HHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHCCCEEECCCCCCCCCCEE IHVHTADGIATICGDVIYDFNDQIVTPFNEIQHAEPRTTGNHGTSKRAEKAAIKKLLSSS EEEEECCCHHHHHHHHHCCCCCCEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC RYLLPVHDRPAKIEGGVVTGRLHDQVPGPVVQSLPQRHWFPA CEEEEECCCCCEECCCEEEEECCCCCCCHHHHHCCHHCCCCC >Mature Secondary Structure ALEIKVLDYGDIELESSFLVLGRDCGRTRRVLTLGFLILGGPYPVVVDTGYRSNQIMET EEEEEEECCCCEEECCCEEEEECCCCCHHHHHHHHHHEECCCEEEEEECCCCCHHHHHH LGMRGLQYHENMIENQLARHGVRMGDVRYVCHTHLHIDHAGKDDLFPMNTTVVLNRRELE HCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEEECHHHH YSVSGLMHPQYPAPDIKHLIDRLHTKSALRFLDLELTGPVELMPGVYCDAANAHTEGSMN HHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHCCCEEECCCCCCCCCCEE IHVHTADGIATICGDVIYDFNDQIVTPFNEIQHAEPRTTGNHGTSKRAEKAAIKKLLSSS EEEEECCCHHHHHHHHHCCCCCCEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC RYLLPVHDRPAKIEGGVVTGRLHDQVPGPVVQSLPQRHWFPA CEEEEECCCCCEECCCEEEEECCCCCCCHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA