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The map label for this gene is yqeB [H]

Identifier: 146339860

GI number: 146339860

Start: 3062273

End: 3062974

Strand: Direct

Name: yqeB [H]

Synonym: BRADO2862

Alternate gene names: 146339860

Gene position: 3062273-3062974 (Clockwise)

Preceding gene: 146339859

Following gene: 146339861

Centisome position: 41.07

GC content: 68.09

Gene sequence:

>702_bases
ATGCAGCTGTCGACACTGGCCGAGCTCAACGCCGAGCGCGCCGCACGCCGCCCGGCCATTTTGGTCACCGACGTCGCCTC
CGGCGAGCAGCGCCTGGTGAAGGCTGCCGCCATCGCGGCCGATCCGCTGCGTGACGAACTTGCCAAGCATCTGCGCATGG
GCAAGAGCGGCATGGTCGAAGCGGGTGGCAAGCGGCTGTTCCTGAACGTCTATGCCCCCACGGCCAAGCTCGTGATCGTC
GGCGCCGTCCATATCAGCCAGGCGCTGGCGCCAATCGCCAAGTCGCTCGGCTATGACGTCACCGTCGTCGATCCGCGGAC
GGCATTCGCCAGCCGGGAGCGTTTCCCGGACGTGCCGCTGATCGCCGAATGGCCCGACGTGGCGCTGCCGCCGCTCAATG
TCGATCACTACACGGCCTTCGTGGCGCTGACGCACGATCCGAAGATCGACGACCCGGCGCTGCTGCACGCGTTCTCGCGC
GACTGCTTCTACATCGGCGCGCTCGGCTCGCGGAAGACCCACGCCAAGCGTTACGACCGGCTGCGCGCGCAGGGGGCCAG
CGACGCCGACATCGCGCGCATCCACGCGCCGATTGGCCTCGCCATCGGCGCGGTCTCCCCGTCCGAGATCGCGGTCTCGA
TCATGGCCGAGATCACCGCGACGCTACGTTTGCCGGCCAAGGAAAAAGAGCAGGCGGCATGA

Upstream 100 bases:

>100_bases
GAAGATGCTCGAGTTCGGCGTCGCAGACGAGACCGCCTGGAATGTCGGGCTGTCGTGCGGCGGCACCATCCGCGTGTTCG
TCGAGAAGGTGGGTTGATCG

Downstream 100 bases:

>100_bases
AGTTCGGTCCTGCCAGCCCGGCTGAGGCGATCGGGGGCGTGACGGTCCACACCCTGCGCAAAGGATCATTGGTGCTCAAG
AAGGGCACCTTGATCGGTCC

Product: putative XdhC/CoxI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MQLSTLAELNAERAARRPAILVTDVASGEQRLVKAAAIAADPLRDELAKHLRMGKSGMVEAGGKRLFLNVYAPTAKLVIV
GAVHISQALAPIAKSLGYDVTVVDPRTAFASRERFPDVPLIAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFSR
DCFYIGALGSRKTHAKRYDRLRAQGASDADIARIHAPIGLAIGAVSPSEIAVSIMAEITATLRLPAKEKEQAA

Sequences:

>Translated_233_residues
MQLSTLAELNAERAARRPAILVTDVASGEQRLVKAAAIAADPLRDELAKHLRMGKSGMVEAGGKRLFLNVYAPTAKLVIV
GAVHISQALAPIAKSLGYDVTVVDPRTAFASRERFPDVPLIAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFSR
DCFYIGALGSRKTHAKRYDRLRAQGASDADIARIHAPIGLAIGAVSPSEIAVSIMAEITATLRLPAKEKEQAA
>Mature_233_residues
MQLSTLAELNAERAARRPAILVTDVASGEQRLVKAAAIAADPLRDELAKHLRMGKSGMVEAGGKRLFLNVYAPTAKLVIV
GAVHISQALAPIAKSLGYDVTVVDPRTAFASRERFPDVPLIAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFSR
DCFYIGALGSRKTHAKRYDRLRAQGASDADIARIHAPIGLAIGAVSPSEIAVSIMAEITATLRLPAKEKEQAA

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=176, Percent_Identity=32.9545454545455, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 24967; Mature: 24967

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSTLAELNAERAARRPAILVTDVASGEQRLVKAAAIAADPLRDELAKHLRMGKSGMVE
CCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEE
AGGKRLFLNVYAPTAKLVIVGAVHISQALAPIAKSLGYDVTVVDPRTAFASRERFPDVPL
CCCCEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCE
IAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFSRDCFYIGALGSRKTHAKRYDR
EECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHH
LRAQGASDADIARIHAPIGLAIGAVSPSEIAVSIMAEITATLRLPAKEKEQAA
HHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MQLSTLAELNAERAARRPAILVTDVASGEQRLVKAAAIAADPLRDELAKHLRMGKSGMVE
CCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEE
AGGKRLFLNVYAPTAKLVIVGAVHISQALAPIAKSLGYDVTVVDPRTAFASRERFPDVPL
CCCCEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCCE
IAEWPDVALPPLNVDHYTAFVALTHDPKIDDPALLHAFSRDCFYIGALGSRKTHAKRYDR
EECCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHH
LRAQGASDADIARIHAPIGLAIGAVSPSEIAVSIMAEITATLRLPAKEKEQAA
HHHCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]