Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yagQ [C]

Identifier: 146339859

GI number: 146339859

Start: 3061946

End: 3062269

Strand: Direct

Name: yagQ [C]

Synonym: BRADO2861

Alternate gene names: 146339859

Gene position: 3061946-3062269 (Clockwise)

Preceding gene: 146339858

Following gene: 146339860

Centisome position: 41.06

GC content: 67.28

Gene sequence:

>324_bases
ATGCTCAACCGCGACGAAGACATCCTCAAGGCCGCCGAGGACTGGCACAAGGGCGGACACGGCGTGGCGCTGGCCACGGT
GGTCGAAACCTGGGGCTCGGCGCCGCGACCGGTCGGCTCCAACCTCGTGATCAACGACGAGGGCACATTCCTAGGCTCGG
TGTCGGGCGGCTGCGTTGAAGGCGCCGTGGTCACCGAGGCGCTGGACGTGATCTCCAGCGGCCAGCCGAAGATGCTCGAG
TTCGGCGTCGCAGACGAGACCGCCTGGAATGTCGGGCTGTCGTGCGGCGGCACCATCCGCGTGTTCGTCGAGAAGGTGGG
TTGA

Upstream 100 bases:

>100_bases
TCGATCGAGGCGCTGATCTCGGCGCTGTCGGCGCCGCTGCCGCCGCATAGCCGCAGCGCGATCCGGCCCGCCGCCTGATC
AATCCGACAAGGAGAGAGCC

Downstream 100 bases:

>100_bases
TCGATGCAGCTGTCGACACTGGCCGAGCTCAACGCCGAGCGCGCCGCACGCCGCCCGGCCATTTTGGTCACCGACGTCGC
CTCCGGCGAGCAGCGCCTGG

Product: putative XdhC/CoxF family protein

Products: NA

Alternate protein names: XdhC/CoxI Family Protein; Xanthine Dehydrogenase; Lipoprotein; Carbon Monoxide Dehydrogenase Accessory Protein; XdhC And CoxI Family; Xanthine And CO Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC/CoxI; XdhC/CoxF Family Protein; Xanthine And Co Dehydrogenase Maturation Factor; CoxI Protein; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Accessory Factor Subfamily; Xanthine And CO Dehydrogenases Maturation Factor; XdhC Homologue; Xanthine Dehydrogenase Accessory Factor Subfamily Putative; Alcohol Dehydrogenase; XdhC Family Protein; Carbon Monoxide Dehydrogenase Accesory Protein; Xanthine/CO Dehydrogenase Maturation Factor; Alanine Dehydrogenase; Xanthine/CO Dehydrogenase Maturation Protein

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MLNRDEDILKAAEDWHKGGHGVALATVVETWGSAPRPVGSNLVINDEGTFLGSVSGGCVEGAVVTEALDVISSGQPKMLE
FGVADETAWNVGLSCGGTIRVFVEKVG

Sequences:

>Translated_107_residues
MLNRDEDILKAAEDWHKGGHGVALATVVETWGSAPRPVGSNLVINDEGTFLGSVSGGCVEGAVVTEALDVISSGQPKMLE
FGVADETAWNVGLSCGGTIRVFVEKVG
>Mature_107_residues
MLNRDEDILKAAEDWHKGGHGVALATVVETWGSAPRPVGSNLVINDEGTFLGSVSGGCVEGAVVTEALDVISSGQPKMLE
FGVADETAWNVGLSCGGTIRVFVEKVG

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11085; Mature: 11085

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRDEDILKAAEDWHKGGHGVALATVVETWGSAPRPVGSNLVINDEGTFLGSVSGGCVE
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCC
GAVVTEALDVISSGQPKMLEFGVADETAWNVGLSCGGTIRVFVEKVG
HHHHHHHHHHHCCCCCCEEEECCCCCCCEECCCCCCCEEEEEEEECC
>Mature Secondary Structure
MLNRDEDILKAAEDWHKGGHGVALATVVETWGSAPRPVGSNLVINDEGTFLGSVSGGCVE
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCC
GAVVTEALDVISSGQPKMLEFGVADETAWNVGLSCGGTIRVFVEKVG
HHHHHHHHHHHCCCCCCEEEECCCCCCCEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA