| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339762
Identifier: 146339762
GI number: 146339762
Start: 2969202
End: 2969897
Strand: Direct
Name: 146339762
Synonym: BRADO2762
Alternate gene names: NA
Gene position: 2969202-2969897 (Clockwise)
Preceding gene: 146339760
Following gene: 146339763
Centisome position: 39.82
GC content: 67.53
Gene sequence:
>696_bases GTGGCGATCGAGCAAGGCAGGTCGGCGGCCGCGCAACTGGCCAAAGCTCATATGACGCGCGCCGGCGCGTATTTTCACAA GGGCGACCTCGACCACGCCATCGAGGACTACAAGCGGGTGATCGCCGCGGCCTCGACCGATCCTCTCGCTGCCTATAACC GCCTGACGCCTGATCGGCGTAGCAACGAGCCATTGGTGCTCTCCGGCTCGGACCGGGCATCACGGCGTGACAACGATCGT GCACTTGCCTATCGCGGACTGGCGGTCGCGAGCTATCAGGCCGGCCTGCTGGAGCAATCGCAGGACAGCTTCAGGCGGCT CGGTGCGGTCGATCCCGGTGATGCCGAAGCGGCCCTGTGGCTTGATCTGGCGCGCCGGCGTGCAGGGCTCGCGAGCGAAC TCGCAAGCCAGGCGAGGCGGCTCGACATGCGCCAATGGCCGGCGCCGCTGTTGCGTCTGTTTCTTGGGCAGGAAACGATC GATGCCGTGCTTGCGGCGGCCGACCGCGGCGGGGGCGCGACGCGCAGGCTGCGGCGTTGCGAGGCAAGCTTCTTCGCCGG CGAATTGATGCTGCAGCAGAACCGTGAGGCGGCGGCCATCCGGTTGATCGACCAGGCCCTCGCAGAATGCCCACTCGGGT CCGACATGCGATCCGTTGCCAGTGCGGACGCCCGCGTTCTCAGCGTCGTGCCCTGA
Upstream 100 bases:
>100_bases CATCGGTCTCGTCTTCAATTCGTCAGCGAACGCTGCGCCGAAACACGCGGCGCGGTGCACAAGCAGCGCGGACGTCGATG CGCGCATCGCCGGCTGCACG
Downstream 100 bases:
>100_bases TCTTCATCGAACAGCCCCGGTGCGCGGGTGGTCACGCGCGCCGGTCATTGCGAACCGGGATCCGTACTAATACGGCCTCA GTATCATCGTCCGCCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAIEQGRSAAAQLAKAHMTRAGAYFHKGDLDHAIEDYKRVIAAASTDPLAAYNRLTPDRRSNEPLVLSGSDRASRRDNDR ALAYRGLAVASYQAGLLEQSQDSFRRLGAVDPGDAEAALWLDLARRRAGLASELASQARRLDMRQWPAPLLRLFLGQETI DAVLAAADRGGGATRRLRRCEASFFAGELMLQQNREAAAIRLIDQALAECPLGSDMRSVASADARVLSVVP
Sequences:
>Translated_231_residues MAIEQGRSAAAQLAKAHMTRAGAYFHKGDLDHAIEDYKRVIAAASTDPLAAYNRLTPDRRSNEPLVLSGSDRASRRDNDR ALAYRGLAVASYQAGLLEQSQDSFRRLGAVDPGDAEAALWLDLARRRAGLASELASQARRLDMRQWPAPLLRLFLGQETI DAVLAAADRGGGATRRLRRCEASFFAGELMLQQNREAAAIRLIDQALAECPLGSDMRSVASADARVLSVVP >Mature_230_residues AIEQGRSAAAQLAKAHMTRAGAYFHKGDLDHAIEDYKRVIAAASTDPLAAYNRLTPDRRSNEPLVLSGSDRASRRDNDRA LAYRGLAVASYQAGLLEQSQDSFRRLGAVDPGDAEAALWLDLARRRAGLASELASQARRLDMRQWPAPLLRLFLGQETID AVLAAADRGGGATRRLRRCEASFFAGELMLQQNREAAAIRLIDQALAECPLGSDMRSVASADARVLSVVP
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25071; Mature: 24939
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEQGRSAAAQLAKAHMTRAGAYFHKGDLDHAIEDYKRVIAAASTDPLAAYNRLTPDRR CCCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC SNEPLVLSGSDRASRRDNDRALAYRGLAVASYQAGLLEQSQDSFRRLGAVDPGDAEAALW CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LDLARRRAGLASELASQARRLDMRQWPAPLLRLFLGQETIDAVLAAADRGGGATRRLRRC HHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH EASFFAGELMLQQNREAAAIRLIDQALAECPLGSDMRSVASADARVLSVVP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCC >Mature Secondary Structure AIEQGRSAAAQLAKAHMTRAGAYFHKGDLDHAIEDYKRVIAAASTDPLAAYNRLTPDRR CCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC SNEPLVLSGSDRASRRDNDRALAYRGLAVASYQAGLLEQSQDSFRRLGAVDPGDAEAALW CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH LDLARRRAGLASELASQARRLDMRQWPAPLLRLFLGQETIDAVLAAADRGGGATRRLRRC HHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHH EASFFAGELMLQQNREAAAIRLIDQALAECPLGSDMRSVASADARVLSVVP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA