Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146339763

Identifier: 146339763

GI number: 146339763

Start: 2970162

End: 2971865

Strand: Direct

Name: 146339763

Synonym: BRADO2763

Alternate gene names: NA

Gene position: 2970162-2971865 (Clockwise)

Preceding gene: 146339762

Following gene: 146339764

Centisome position: 39.83

GC content: 66.08

Gene sequence:

>1704_bases
ATGCCGATCCAGCCGCAGGGCCTACGCAAGCCGCAGACCGACCAGACCAGCGACCAGACCGGCGTGTTCGAGACCGACAG
CTGGCTCACGCCCGACCTGACCCAGCTCTGGCTGGCCACCCAGGCCCCGGTCGCCGCGCCGGCCGCGGCACCCGCCTCGG
ATCCGTCTGAGGCGATCGCGATCTATGGCAATTTCTGCAGCGTCGCCGCGACGGTGACCACCGCGCCGAGCTCGACGTCG
AGCGGGAGCACGGTGACCTCCACCTCGACGGTCACCGCCACATCCACGACCAAGACGCCGGTGCCGTCCTGGGTCAACAC
ATTGACCAACGCCGCGATCAAGGCCGACATGACGGCGGCCATCACCAATGGCACGGTGACCTATGCAGGCCTGCTGAAAG
TCTTCACCGACATCGACGCATCGCTGGCCGCGACCAAGACCAAGCTGAGCGCCAGCCAGTTCGCCGATCTGAAGACGATC
GCCGCCAACCTCAACAACGGCGTCTCGACCTCGAGCTACCTGACCTACATCACCCAGGCCTTCGTCAACGGCAACGCCGC
CAACGCCACCTGGACCGGCGGCGCCGCCAGCTCCGTCGCGCTCGGCAATCTCGCGTCGGGCTCGACCGAGCTGCAATTTG
CCGAGCTGATCGGCAAGTGGTTCCTCGGCACCGACCTGCCGTCGTCGAAGGTCATCCTCGGCAGCACGCAGTTCTCGGTG
TCCTATTCGAACTCGACCAAGGCGCTGTTCGGTGCGAGCGGCGCCAGCATGAGCGATATCAACCAGGGCTACCTGGGCGA
CTGCTATTTGCTCGCGGGCCTCGCCGAGGTCGCCTACAAGGAGCAGTCGGTCATCTCCTCGATGTTCACGGCCAACGGCA
ACAACACCTATGGCGTGCGCTTCTACGTCAACGGCACGGCGCGCTACGTCACCGTCAACACCTCGCTCGCCAATGGCGGC
ACCATCTTCAACAATGGCGGCAACGCGATCTGGGCGAGCCTGGCCGAGAAGGCCTATGCGGAGCTGCAGGCGAGCGGCGT
CTACACCGGCAATTCCATTAATTACGGTAATTCCTACACCACGATCGGCAATGGCGGCGCGCCCGAGATCGCGCTCGAGG
CGATCACCGGCGCCAGCCAGATCACCGACTTCCGCGCCATGGGCGGCTCATGGGGCAAGGTGGTCTACAATTCCTCCTTC
GGCGTGACCAGCTACACCACCGGCAACGCGACCTCGGGCGTGCTGGCGACGATCGCGGCGAGCCTCGCCGCCGGCGACGA
CGTCATCCTGTCGTCCTACACCAACGCCAAGGATGCGACCGGCAAGACCACGCTGGTCGCCAGCCACGCGATGTCGATCT
ACGGCTACAACAGCGCCAACGGCATGCTGCAGGTCCGCAATCCCTGGGGCTCGGCGGCCGGCCAGTACTGGCAGACGACG
TTCGAGGTCAGCCTCGCCACGTTGCTCGCGGCCGGCGACACGATCACGATCGACAATGTCGGCGATGCGAAAAAGGTGGC
GGCGGCGACCACCACGACGTCGTCGGGCCTGAAGCTCACCTCCGACGTCAACGATCTCGCCGGCGCTGCCTCGGGCTTCG
TCCAGGCGATCGCCTCGCTCACCGACGGCGGTTCGTCGAACGTGGCGTTCACGCAGGGCCTCGCCTCGCAGCAGCACACG
CTGGCGATGCCGATGGCGGCGTGA

Upstream 100 bases:

>100_bases
ACGGATCGCTCAGCTTTGCCGCAACGGCTGATGCGAACGATGGGAGCCCGATCGCGACGACGATCACTCACGAGCCATCG
TTCACGGAGAGCCTCGACCA

Downstream 100 bases:

>100_bases
CGACATCCGGAGGGGCGATCGGTCCACCCTCTCTCTGAGAGCAGGTTGCTCATGGTGCCGCGTGCGGCGATCGGCGCCAA
ACCCTGATAGTGAGGCGCGT

Product: putative peptidase

Products: NA

Alternate protein names: Peptidase; Peptidase Domain-Containing Protein; APHP Domain-Containing Protein

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MPIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIAIYGNFCSVAATVTTAPSSTS
SGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAAITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTI
AANLNNGVSTSSYLTYITQAFVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV
SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVRFYVNGTARYVTVNTSLANGG
TIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYTTIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSF
GVTSYTTGNATSGVLATIAASLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT
FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASLTDGGSSNVAFTQGLASQQHT
LAMPMAA

Sequences:

>Translated_567_residues
MPIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIAIYGNFCSVAATVTTAPSSTS
SGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAAITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTI
AANLNNGVSTSSYLTYITQAFVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV
SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVRFYVNGTARYVTVNTSLANGG
TIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYTTIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSF
GVTSYTTGNATSGVLATIAASLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT
FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASLTDGGSSNVAFTQGLASQQHT
LAMPMAA
>Mature_566_residues
PIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIAIYGNFCSVAATVTTAPSSTSS
GSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAAITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTIA
ANLNNGVSTSSYLTYITQAFVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSVS
YSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVRFYVNGTARYVTVNTSLANGGT
IFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYTTIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSFG
VTSYTTGNATSGVLATIAASLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTTF
EVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASLTDGGSSNVAFTQGLASQQHTL
AMPMAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI221554549, Length=242, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57804; Mature: 57673

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00139 THIOL_PROTEASE_CYS ; PS50203 CALPAIN_CAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIA
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEE
IYGNFCSVAATVTTAPSSTSSGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAA
EEECCEEEEEEEEECCCCCCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE
ITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTIAANLNNGVSTSSYLTYITQA
EECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV
HHCCCCCCCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEE
SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVR
EECCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
FYVNGTARYVTVNTSLANGGTIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYT
EEECCCEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEE
TIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSFGVTSYTTGNATSGVLATIAA
ECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHH
SLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT
HHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHH
FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASL
HHHHHHHHHHCCCEEEECCCCCCHHEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHH
TDGGSSNVAFTQGLASQQHTLAMPMAA
CCCCCCCEEEECCCCCCCCEEECCCCC
>Mature Secondary Structure 
PIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIA
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEE
IYGNFCSVAATVTTAPSSTSSGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAA
EEECCEEEEEEEEECCCCCCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE
ITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTIAANLNNGVSTSSYLTYITQA
EECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV
HHCCCCCCCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEE
SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVR
EECCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
FYVNGTARYVTVNTSLANGGTIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYT
EEECCCEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEE
TIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSFGVTSYTTGNATSGVLATIAA
ECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHH
SLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT
HHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHH
FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASL
HHHHHHHHHHCCCEEEECCCCCCHHEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHH
TDGGSSNVAFTQGLASQQHTLAMPMAA
CCCCCCCEEEECCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA