| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339763
Identifier: 146339763
GI number: 146339763
Start: 2970162
End: 2971865
Strand: Direct
Name: 146339763
Synonym: BRADO2763
Alternate gene names: NA
Gene position: 2970162-2971865 (Clockwise)
Preceding gene: 146339762
Following gene: 146339764
Centisome position: 39.83
GC content: 66.08
Gene sequence:
>1704_bases ATGCCGATCCAGCCGCAGGGCCTACGCAAGCCGCAGACCGACCAGACCAGCGACCAGACCGGCGTGTTCGAGACCGACAG CTGGCTCACGCCCGACCTGACCCAGCTCTGGCTGGCCACCCAGGCCCCGGTCGCCGCGCCGGCCGCGGCACCCGCCTCGG ATCCGTCTGAGGCGATCGCGATCTATGGCAATTTCTGCAGCGTCGCCGCGACGGTGACCACCGCGCCGAGCTCGACGTCG AGCGGGAGCACGGTGACCTCCACCTCGACGGTCACCGCCACATCCACGACCAAGACGCCGGTGCCGTCCTGGGTCAACAC ATTGACCAACGCCGCGATCAAGGCCGACATGACGGCGGCCATCACCAATGGCACGGTGACCTATGCAGGCCTGCTGAAAG TCTTCACCGACATCGACGCATCGCTGGCCGCGACCAAGACCAAGCTGAGCGCCAGCCAGTTCGCCGATCTGAAGACGATC GCCGCCAACCTCAACAACGGCGTCTCGACCTCGAGCTACCTGACCTACATCACCCAGGCCTTCGTCAACGGCAACGCCGC CAACGCCACCTGGACCGGCGGCGCCGCCAGCTCCGTCGCGCTCGGCAATCTCGCGTCGGGCTCGACCGAGCTGCAATTTG CCGAGCTGATCGGCAAGTGGTTCCTCGGCACCGACCTGCCGTCGTCGAAGGTCATCCTCGGCAGCACGCAGTTCTCGGTG TCCTATTCGAACTCGACCAAGGCGCTGTTCGGTGCGAGCGGCGCCAGCATGAGCGATATCAACCAGGGCTACCTGGGCGA CTGCTATTTGCTCGCGGGCCTCGCCGAGGTCGCCTACAAGGAGCAGTCGGTCATCTCCTCGATGTTCACGGCCAACGGCA ACAACACCTATGGCGTGCGCTTCTACGTCAACGGCACGGCGCGCTACGTCACCGTCAACACCTCGCTCGCCAATGGCGGC ACCATCTTCAACAATGGCGGCAACGCGATCTGGGCGAGCCTGGCCGAGAAGGCCTATGCGGAGCTGCAGGCGAGCGGCGT CTACACCGGCAATTCCATTAATTACGGTAATTCCTACACCACGATCGGCAATGGCGGCGCGCCCGAGATCGCGCTCGAGG CGATCACCGGCGCCAGCCAGATCACCGACTTCCGCGCCATGGGCGGCTCATGGGGCAAGGTGGTCTACAATTCCTCCTTC GGCGTGACCAGCTACACCACCGGCAACGCGACCTCGGGCGTGCTGGCGACGATCGCGGCGAGCCTCGCCGCCGGCGACGA CGTCATCCTGTCGTCCTACACCAACGCCAAGGATGCGACCGGCAAGACCACGCTGGTCGCCAGCCACGCGATGTCGATCT ACGGCTACAACAGCGCCAACGGCATGCTGCAGGTCCGCAATCCCTGGGGCTCGGCGGCCGGCCAGTACTGGCAGACGACG TTCGAGGTCAGCCTCGCCACGTTGCTCGCGGCCGGCGACACGATCACGATCGACAATGTCGGCGATGCGAAAAAGGTGGC GGCGGCGACCACCACGACGTCGTCGGGCCTGAAGCTCACCTCCGACGTCAACGATCTCGCCGGCGCTGCCTCGGGCTTCG TCCAGGCGATCGCCTCGCTCACCGACGGCGGTTCGTCGAACGTGGCGTTCACGCAGGGCCTCGCCTCGCAGCAGCACACG CTGGCGATGCCGATGGCGGCGTGA
Upstream 100 bases:
>100_bases ACGGATCGCTCAGCTTTGCCGCAACGGCTGATGCGAACGATGGGAGCCCGATCGCGACGACGATCACTCACGAGCCATCG TTCACGGAGAGCCTCGACCA
Downstream 100 bases:
>100_bases CGACATCCGGAGGGGCGATCGGTCCACCCTCTCTCTGAGAGCAGGTTGCTCATGGTGCCGCGTGCGGCGATCGGCGCCAA ACCCTGATAGTGAGGCGCGT
Product: putative peptidase
Products: NA
Alternate protein names: Peptidase; Peptidase Domain-Containing Protein; APHP Domain-Containing Protein
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MPIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIAIYGNFCSVAATVTTAPSSTS SGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAAITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTI AANLNNGVSTSSYLTYITQAFVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVRFYVNGTARYVTVNTSLANGG TIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYTTIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSF GVTSYTTGNATSGVLATIAASLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASLTDGGSSNVAFTQGLASQQHT LAMPMAA
Sequences:
>Translated_567_residues MPIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIAIYGNFCSVAATVTTAPSSTS SGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAAITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTI AANLNNGVSTSSYLTYITQAFVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVRFYVNGTARYVTVNTSLANGG TIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYTTIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSF GVTSYTTGNATSGVLATIAASLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASLTDGGSSNVAFTQGLASQQHT LAMPMAA >Mature_566_residues PIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIAIYGNFCSVAATVTTAPSSTSS GSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAAITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTIA ANLNNGVSTSSYLTYITQAFVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSVS YSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVRFYVNGTARYVTVNTSLANGGT IFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYTTIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSFG VTSYTTGNATSGVLATIAASLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTTF EVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASLTDGGSSNVAFTQGLASQQHTL AMPMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI221554549, Length=242, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57804; Mature: 57673
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00139 THIOL_PROTEASE_CYS ; PS50203 CALPAIN_CAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIA CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEE IYGNFCSVAATVTTAPSSTSSGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAA EEECCEEEEEEEEECCCCCCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE ITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTIAANLNNGVSTSSYLTYITQA EECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV HHCCCCCCCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEE SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVR EECCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE FYVNGTARYVTVNTSLANGGTIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYT EEECCCEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEE TIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSFGVTSYTTGNATSGVLATIAA ECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHH SLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT HHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHH FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASL HHHHHHHHHHCCCEEEECCCCCCHHEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHH TDGGSSNVAFTQGLASQQHTLAMPMAA CCCCCCCEEEECCCCCCCCEEECCCCC >Mature Secondary Structure PIQPQGLRKPQTDQTSDQTGVFETDSWLTPDLTQLWLATQAPVAAPAAAPASDPSEAIA CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEE IYGNFCSVAATVTTAPSSTSSGSTVTSTSTVTATSTTKTPVPSWVNTLTNAAIKADMTAA EEECCEEEEEEEEECCCCCCCCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEE ITNGTVTYAGLLKVFTDIDASLAATKTKLSASQFADLKTIAANLNNGVSTSSYLTYITQA EECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH FVNGNAANATWTGGAASSVALGNLASGSTELQFAELIGKWFLGTDLPSSKVILGSTQFSV HHCCCCCCCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECEEEEE SYSNSTKALFGASGASMSDINQGYLGDCYLLAGLAEVAYKEQSVISSMFTANGNNTYGVR EECCCCCEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE FYVNGTARYVTVNTSLANGGTIFNNGGNAIWASLAEKAYAELQASGVYTGNSINYGNSYT EEECCCEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEE TIGNGGAPEIALEAITGASQITDFRAMGGSWGKVVYNSSFGVTSYTTGNATSGVLATIAA ECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHH SLAAGDDVILSSYTNAKDATGKTTLVASHAMSIYGYNSANGMLQVRNPWGSAAGQYWQTT HHCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHH FEVSLATLLAAGDTITIDNVGDAKKVAAATTTTSSGLKLTSDVNDLAGAASGFVQAIASL HHHHHHHHHHCCCEEEECCCCCCHHEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHH TDGGSSNVAFTQGLASQQHTLAMPMAA CCCCCCCEEEECCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA