Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146339704

Identifier: 146339704

GI number: 146339704

Start: 2900003

End: 2900782

Strand: Reverse

Name: 146339704

Synonym: BRADO2701

Alternate gene names: NA

Gene position: 2900782-2900003 (Counterclockwise)

Preceding gene: 146339705

Following gene: 146339698

Centisome position: 38.9

GC content: 64.36

Gene sequence:

>780_bases
ATGTCGCCAGCCGAAGCGCGTCTGAAGGAAGTGCCGTCGAACATGACGGAAGCGGAGTGGTCGCAGCGGGTCAATCTCGC
CGCAGCCTACCGTCTGGTGGCGATGTTCGGCTGGGACGATCTGGTCGACACACACATCTCGGCCCGCGTCCCCGGCCCCG
AGCATCACTTCCTCATCAACCCCTACGGCCTGTTGTTCGAGGAGATCACCGCGTCGAGCCTGATCAAGGTCGACCTCTAC
GGCAACCAGCTGTCCGAGAGCGAGTACAGCATCAATCCCGCCGGCTTCACCATCCACTCGGCGATTCACGAGGTGCGCGA
GGATGCCGGCTGCGTCATCCACCTGCATACGCTCGACGGCGTCGCGGTGTCGAGCTGCGCCGACGGCCTGCTGCCGCTGA
ACCAGATCGCGCAATACGTGACCCACGACCTCGCCTATCACGACTACGAAGGCGTGGCACTGGACCATGATGAGCGGCCC
CGGCTGCAGCGCGACCTCGGCACCAAGAACCACATGCTACTGCGCAATCACGGTACGCTGACCGTCGGACGTTCGGTCGC
CTCGGCGTTCGAGCGCATGTATCACCTGGAGCGCGCCTGCTCGATCCAGGTGCGTACCCGCACGCTCGGACCCACGGCCT
ATCCGGTACGCGAGGAGGTCGTCGACAAGAACGCCAAGCTGTTCGACAACGCGGAACGCATCGAGCTCCGTTCGACCCAG
CTGGTCTGGCCGCCGCTGCTGCGCCGGCTCGACCGGATCAATCCAGGCTATCGCAATTGA

Upstream 100 bases:

>100_bases
TGCTCCGCCAATCGACATGACTGCCCTCCCGGCTCCGCGCCTTGCCGAGCCGGGAGAGGCAGCTTACGCTCGGGTCAACC
TCTCGAGACCGGAGCATGCC

Downstream 100 bases:

>100_bases
TCTTGCTGGGCTGATCGGCTATCAACAGTTCATCACCCTCTACGCTATTTGGAATGAAACGCCGCCCAATTCCGGGCGGC
GTTTTTTACTTGCTCCTCAG

Product: aldolase II superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSPAEARLKEVPSNMTEAEWSQRVNLAAAYRLVAMFGWDDLVDTHISARVPGPEHHFLINPYGLLFEEITASSLIKVDLY
GNQLSESEYSINPAGFTIHSAIHEVREDAGCVIHLHTLDGVAVSSCADGLLPLNQIAQYVTHDLAYHDYEGVALDHDERP
RLQRDLGTKNHMLLRNHGTLTVGRSVASAFERMYHLERACSIQVRTRTLGPTAYPVREEVVDKNAKLFDNAERIELRSTQ
LVWPPLLRRLDRINPGYRN

Sequences:

>Translated_259_residues
MSPAEARLKEVPSNMTEAEWSQRVNLAAAYRLVAMFGWDDLVDTHISARVPGPEHHFLINPYGLLFEEITASSLIKVDLY
GNQLSESEYSINPAGFTIHSAIHEVREDAGCVIHLHTLDGVAVSSCADGLLPLNQIAQYVTHDLAYHDYEGVALDHDERP
RLQRDLGTKNHMLLRNHGTLTVGRSVASAFERMYHLERACSIQVRTRTLGPTAYPVREEVVDKNAKLFDNAERIELRSTQ
LVWPPLLRRLDRINPGYRN
>Mature_258_residues
SPAEARLKEVPSNMTEAEWSQRVNLAAAYRLVAMFGWDDLVDTHISARVPGPEHHFLINPYGLLFEEITASSLIKVDLYG
NQLSESEYSINPAGFTIHSAIHEVREDAGCVIHLHTLDGVAVSSCADGLLPLNQIAQYVTHDLAYHDYEGVALDHDERPR
LQRDLGTKNHMLLRNHGTLTVGRSVASAFERMYHLERACSIQVRTRTLGPTAYPVREEVVDKNAKLFDNAERIELRSTQL
VWPPLLRRLDRINPGYRN

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826319, Length=187, Percent_Identity=47.5935828877005, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI29826323, Length=187, Percent_Identity=47.5935828877005, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI29826325, Length=187, Percent_Identity=47.5935828877005, Blast_Score=176, Evalue=1e-44,
Organism=Homo sapiens, GI29826321, Length=187, Percent_Identity=47.5935828877005, Blast_Score=176, Evalue=1e-44,
Organism=Homo sapiens, GI297307160, Length=194, Percent_Identity=41.2371134020619, Blast_Score=154, Evalue=9e-38,
Organism=Homo sapiens, GI297307158, Length=194, Percent_Identity=41.2371134020619, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI9257192, Length=194, Percent_Identity=41.2371134020619, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI89276787, Length=194, Percent_Identity=41.2371134020619, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI9257190, Length=194, Percent_Identity=41.2371134020619, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI9943848, Length=196, Percent_Identity=40.8163265306122, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI9951927, Length=196, Percent_Identity=40.8163265306122, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI62912453, Length=196, Percent_Identity=40.8163265306122, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI115533218, Length=248, Percent_Identity=38.3064516129032, Blast_Score=165, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI115533216, Length=248, Percent_Identity=38.3064516129032, Blast_Score=164, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71989555, Length=248, Percent_Identity=32.6612903225806, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989560, Length=248, Percent_Identity=32.6612903225806, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989550, Length=248, Percent_Identity=32.6612903225806, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989541, Length=248, Percent_Identity=32.6612903225806, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71989544, Length=248, Percent_Identity=32.6612903225806, Blast_Score=126, Evalue=1e-29,
Organism=Drosophila melanogaster, GI281363755, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI281363751, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24655690, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24655685, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI281363763, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI281363757, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI17136738, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI281363761, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI281363759, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI281363753, Length=191, Percent_Identity=38.7434554973822, Blast_Score=135, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 29246; Mature: 29115

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAEARLKEVPSNMTEAEWSQRVNLAAAYRLVAMFGWDDLVDTHISARVPGPEHHFLIN
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCEEEEC
PYGLLFEEITASSLIKVDLYGNQLSESEYSINPAGFTIHSAIHEVREDAGCVIHLHTLDG
HHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VAVSSCADGLLPLNQIAQYVTHDLAYHDYEGVALDHDERPRLQRDLGTKNHMLLRNHGTL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCEEEECCCCE
TVGRSVASAFERMYHLERACSIQVRTRTLGPTAYPVREEVVDKNAKLFDNAERIELRSTQ
EEHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHCCCCHHHCCHHHEEECCCE
LVWPPLLRRLDRINPGYRN
ECCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SPAEARLKEVPSNMTEAEWSQRVNLAAAYRLVAMFGWDDLVDTHISARVPGPEHHFLIN
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCCCCCEEEEC
PYGLLFEEITASSLIKVDLYGNQLSESEYSINPAGFTIHSAIHEVREDAGCVIHLHTLDG
HHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VAVSSCADGLLPLNQIAQYVTHDLAYHDYEGVALDHDERPRLQRDLGTKNHMLLRNHGTL
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCEEEECCCCE
TVGRSVASAFERMYHLERACSIQVRTRTLGPTAYPVREEVVDKNAKLFDNAERIELRSTQ
EEHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHCCCCHHHCCHHHEEECCCE
LVWPPLLRRLDRINPGYRN
ECCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]