| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339705
Identifier: 146339705
GI number: 146339705
Start: 2900889
End: 2902541
Strand: Reverse
Name: 146339705
Synonym: BRADO2702
Alternate gene names: NA
Gene position: 2902541-2900889 (Counterclockwise)
Preceding gene: 146339708
Following gene: 146339704
Centisome position: 38.93
GC content: 64.79
Gene sequence:
>1653_bases ATGACATCGATAACCACTTCGGTCCTCGAGACGCCGACGCGGCGGACCCTCGAGCGGACTTGTGACGATCTCGCCATGTT CGCGCTCGCCGCTGTCGCGGTGGTGGCCGGACTGACATTCCGCGACTATGGCCTCGGCTGGGACGACTACACCCATGCCG AATATGCCGATCTGTTGTTGCGCATGTACGGTTCCGGTTTCAGGGATCAGGCGGCGCTGTCGTTCGCCAACCTCTATATG TACGGAGGTGGGTTCGACATGGTTGCAGCGTTGCTGCACAAGATCCTGCCGCTGGAGCTGTTCGAGACCCGCCGGCTGGT CGGCGCGATCGTCGGCCTGATCGGGCTCGGCGTGACATGGCGCCTCGCGCGCCGCATCGGCGGTGCGGTCGCCGGGCTGG CGGCGCTGCTGCTGCTGGCGCTGTGCCCGATCTTCTACGGCCACATGTTCATGAACCCGAAGGATGCCCCCTTCGCGGTC GCCATGGTCGTGCTGCTGATGGGGCTGGTGCGTCTCGCCGACGAGTACCCCTACCCCTCGCCGCGCACCATCCTGATCCT CGGCCTGGGCGCCGGCTTCTCGATCGGCTCGCGCATCCTCGGCGGCATGGCGGTGGTGTACGCCATGATCGGTTTCATGC CGCTGTTCCTGGAGGAATACCGCACGCAAGGCGCCCGCGAGGCGGTGCGCCGTTTCGCCAGCGTGCTCTATATGCTGATC CCCGGCCTGATCCTCGGCTATCTGGTCATGGGCCTGATCTGGCCTTGGTCGATCATCGAGCCGGCGAATCCGTTCCGCGC GCTCACCTATTTCTCGCACTTCTTCGAGAAGCCGTGGAAGGAGATGTTCGACGGGGCGCTCGTCTCGGTACCGGACATGC CGTGGTCCTATCTGCCCACGCTGTTTGCGCTGCAATTGCCCGAGCTGATGATCGCGCTGTTCGTGGCGGGCGTGGTGGCC TCGCTGATGTCGCTGTCGCGGCCGAATATGCCGGCGCGACAGAAGAGCATCCTGTTGATGCTGACCTTGGCGGCAACGCT GCCGATCCTGATCGCGATCGTCAAACGCCCGGCGCTCTACAACGGCATCCGCCATTTCGTATTCGTGATCCCGCCGATGG CGCTGCTCGGCGGCATCGCGTTCTCGTGGCTGTTGTCCTGGCTCAACAATGACGAGCGCCGCAGCTGGCAGCCCGTGGCG ATCGCCGCCTTCTGCTTCGGACTGCTCCTGCCGCTGGCCGAGATGATCCGGCTGCACCCCTATCAATATACGCATTTCAA CTACATCGCCGGCACCGTCCGCGAGGCGGATGCGCGCTTCATGCTGGATTATTGGGGCCTCGCGCTGAAGCAGGCCTCCG ACGGTCTCAAGGAGCAGCTCGACGAGCGCCAGGAAGTGCCGCCGATCGGGCACAAATGGAAGGTCGCGGTGTGCGGTCCG CAACGGCCGGCGCAGGTCGCACTCGGCCCCGACTTCACCATCGGCTGGGACAGTCATGCCGCCGACTTTGCGATGACGCT CGGCGAGTTCTACTGCAAGGGACTGACCGCCCCCGTGATGGTCGAGATCAAGCGCGACGACGTCGTGTTCGCCCGGGTCT ACGACATCCGCGGCCGGAGCATCTCCAGCCTGCTCTCCATTCCGGCGCCTTGA
Upstream 100 bases:
>100_bases CATCACCTCGGAAACGGGGACGCGCTATACGCAAACGGGGAAGAAAGCCTTCGAAGCTCGGAAGCGGGGTCGCTAGGGGA CGCCGGGTCACTTATCAGCC
Downstream 100 bases:
>100_bases GCGATCTGCTCCGCCAATCGACATGACTGCCCTCCCGGCTCCGCGCCTTGCCGAGCCGGGAGAGGCAGCTTACGCTCGGG TCAACCTCTCGAGACCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MTSITTSVLETPTRRTLERTCDDLAMFALAAVAVVAGLTFRDYGLGWDDYTHAEYADLLLRMYGSGFRDQAALSFANLYM YGGGFDMVAALLHKILPLELFETRRLVGAIVGLIGLGVTWRLARRIGGAVAGLAALLLLALCPIFYGHMFMNPKDAPFAV AMVVLLMGLVRLADEYPYPSPRTILILGLGAGFSIGSRILGGMAVVYAMIGFMPLFLEEYRTQGAREAVRRFASVLYMLI PGLILGYLVMGLIWPWSIIEPANPFRALTYFSHFFEKPWKEMFDGALVSVPDMPWSYLPTLFALQLPELMIALFVAGVVA SLMSLSRPNMPARQKSILLMLTLAATLPILIAIVKRPALYNGIRHFVFVIPPMALLGGIAFSWLLSWLNNDERRSWQPVA IAAFCFGLLLPLAEMIRLHPYQYTHFNYIAGTVREADARFMLDYWGLALKQASDGLKEQLDERQEVPPIGHKWKVAVCGP QRPAQVALGPDFTIGWDSHAADFAMTLGEFYCKGLTAPVMVEIKRDDVVFARVYDIRGRSISSLLSIPAP
Sequences:
>Translated_550_residues MTSITTSVLETPTRRTLERTCDDLAMFALAAVAVVAGLTFRDYGLGWDDYTHAEYADLLLRMYGSGFRDQAALSFANLYM YGGGFDMVAALLHKILPLELFETRRLVGAIVGLIGLGVTWRLARRIGGAVAGLAALLLLALCPIFYGHMFMNPKDAPFAV AMVVLLMGLVRLADEYPYPSPRTILILGLGAGFSIGSRILGGMAVVYAMIGFMPLFLEEYRTQGAREAVRRFASVLYMLI PGLILGYLVMGLIWPWSIIEPANPFRALTYFSHFFEKPWKEMFDGALVSVPDMPWSYLPTLFALQLPELMIALFVAGVVA SLMSLSRPNMPARQKSILLMLTLAATLPILIAIVKRPALYNGIRHFVFVIPPMALLGGIAFSWLLSWLNNDERRSWQPVA IAAFCFGLLLPLAEMIRLHPYQYTHFNYIAGTVREADARFMLDYWGLALKQASDGLKEQLDERQEVPPIGHKWKVAVCGP QRPAQVALGPDFTIGWDSHAADFAMTLGEFYCKGLTAPVMVEIKRDDVVFARVYDIRGRSISSLLSIPAP >Mature_549_residues TSITTSVLETPTRRTLERTCDDLAMFALAAVAVVAGLTFRDYGLGWDDYTHAEYADLLLRMYGSGFRDQAALSFANLYMY GGGFDMVAALLHKILPLELFETRRLVGAIVGLIGLGVTWRLARRIGGAVAGLAALLLLALCPIFYGHMFMNPKDAPFAVA MVVLLMGLVRLADEYPYPSPRTILILGLGAGFSIGSRILGGMAVVYAMIGFMPLFLEEYRTQGAREAVRRFASVLYMLIP GLILGYLVMGLIWPWSIIEPANPFRALTYFSHFFEKPWKEMFDGALVSVPDMPWSYLPTLFALQLPELMIALFVAGVVAS LMSLSRPNMPARQKSILLMLTLAATLPILIAIVKRPALYNGIRHFVFVIPPMALLGGIAFSWLLSWLNNDERRSWQPVAI AAFCFGLLLPLAEMIRLHPYQYTHFNYIAGTVREADARFMLDYWGLALKQASDGLKEQLDERQEVPPIGHKWKVAVCGPQ RPAQVALGPDFTIGWDSHAADFAMTLGEFYCKGLTAPVMVEIKRDDVVFARVYDIRGRSISSLLSIPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61024; Mature: 60893
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSITTSVLETPTRRTLERTCDDLAMFALAAVAVVAGLTFRDYGLGWDDYTHAEYADLLL CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHH RMYGSGFRDQAALSFANLYMYGGGFDMVAALLHKILPLELFETRRLVGAIVGLIGLGVTW HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLARRIGGAVAGLAALLLLALCPIFYGHMFMNPKDAPFAVAMVVLLMGLVRLADEYPYPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC PRTILILGLGAGFSIGSRILGGMAVVYAMIGFMPLFLEEYRTQGAREAVRRFASVLYMLI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH PGLILGYLVMGLIWPWSIIEPANPFRALTYFSHFFEKPWKEMFDGALVSVPDMPWSYLPT HHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH LFALQLPELMIALFVAGVVASLMSLSRPNMPARQKSILLMLTLAATLPILIAIVKRPALY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH NGIRHFVFVIPPMALLGGIAFSWLLSWLNNDERRSWQPVAIAAFCFGLLLPLAEMIRLHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC YQYTHFNYIAGTVREADARFMLDYWGLALKQASDGLKEQLDERQEVPPIGHKWKVAVCGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC QRPAQVALGPDFTIGWDSHAADFAMTLGEFYCKGLTAPVMVEIKRDDVVFARVYDIRGRS CCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCC ISSLLSIPAP HHHHHCCCCC >Mature Secondary Structure TSITTSVLETPTRRTLERTCDDLAMFALAAVAVVAGLTFRDYGLGWDDYTHAEYADLLL CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHH RMYGSGFRDQAALSFANLYMYGGGFDMVAALLHKILPLELFETRRLVGAIVGLIGLGVTW HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLARRIGGAVAGLAALLLLALCPIFYGHMFMNPKDAPFAVAMVVLLMGLVRLADEYPYPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC PRTILILGLGAGFSIGSRILGGMAVVYAMIGFMPLFLEEYRTQGAREAVRRFASVLYMLI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH PGLILGYLVMGLIWPWSIIEPANPFRALTYFSHFFEKPWKEMFDGALVSVPDMPWSYLPT HHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH LFALQLPELMIALFVAGVVASLMSLSRPNMPARQKSILLMLTLAATLPILIAIVKRPALY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH NGIRHFVFVIPPMALLGGIAFSWLLSWLNNDERRSWQPVAIAAFCFGLLLPLAEMIRLHP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC YQYTHFNYIAGTVREADARFMLDYWGLALKQASDGLKEQLDERQEVPPIGHKWKVAVCGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC QRPAQVALGPDFTIGWDSHAADFAMTLGEFYCKGLTAPVMVEIKRDDVVFARVYDIRGRS CCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCC ISSLLSIPAP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA