| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ygjG [C]
Identifier: 146339621
GI number: 146339621
Start: 2802121
End: 2803464
Strand: Reverse
Name: ygjG [C]
Synonym: BRADO2614
Alternate gene names: 146339621
Gene position: 2803464-2802121 (Counterclockwise)
Preceding gene: 146339622
Following gene: 146339620
Centisome position: 37.6
GC content: 68.01
Gene sequence:
>1344_bases ATGACGACCACCTCTTCCGCCCCCCACGATCCCGTGCTCACCGATGCGCAGCTGAATTCGTTCTGGATGCCGTTCACGCC GAACCGGCAATTCAAGACCAATCCGCGCCTGTTCGTCGCCGCGGAAGGCATGCACTACATCAAGCCTGACGGCGGTCGCG TGCTCGACGCGATGGCCGGGCTGTGGTGCGTCAACGCCGGCCATGGCCAGCGGCGCATCGTCGAGGCGATCCAGGCGCAA GCCGCCAAGCTCGATTTCGTCTCGTCGTTCCAGATGAGCCACCCGGCCGCGTTCGAGCTCGCTGCCCGCATTGTCGCGAT CGCGCCGGACGGATTGGACCACGTCTTCTTCACCAACTCCGGATCGGAGTCCGTCGACACCGCGCTGAAGATCGCCCGCG CCTACCACCGCGCCCGCGGACAAGGCGAACGCATCCGCTTCATCAGCCGCGCCCGCGCCTATCACGGCATGGGCTGGGGC GGCCTCTCGGTGAGCGGCCTGTCGCGCCACCGTCGCGACTTCGGACCGTTGCTGCCCGAGATCGATCATCTGCCGCACAC CCACGATCCCGAACGCGCGGCATTCTCGCGCGGCCAGCCACATTGGGGCGTGCACTTCGCCGACGAGTTGGAGAAGCTGC TGGCGCTGCATGATCCCGCGACGGTCGCCGCTGTCATCGTCGAGCCGGTCACCGGCTCGGGCGGCGTGCTGCCGCCGCCG GTCGGCTATCTCGAGCGGCTGCGCGAGATCTGCGACCGCAACGGCATTCTGTTGATCTTCGACGAGGTCATCACCGGCTT CGGCCGGGTCGGTGCGGCGTTTGCCGCCAATGCCTTCGGCGTGACGCCTGACATCATCACCTGTGCCAAGGGCATGACCA ACGGCGCGGTGCCGATGGGCGGCGTCATCGTCCACCGCAACATCCACGATACGATGATGAGCGGTCCGGCGGGGATCGAG CTGTTTCACGGCTATACTTATTCCGCCCATCCGCTCGCCTGCGCCGCGGCGCTCGCGACGCTCGACGTCTACCAGGAGCA GGATCTGTTCGGCCGCGCCGAGCGGGTCGCTCCGTTGTGGGAAAACGCCGTTCACGCGCTGCGCCAGGCCCCGCACGTGA TCGACATCCGCAACATCGGCCTGCTCGCCGCGATCGATCTCAAGCCGCGCGACGGCGCGCCGGGCGCCCGCGGCAGCGAA TGCGCGGCGCGCTGCTTCGAAGACGGCGTGCTGATCCGCGGCTCCAGCGACACGCTGGTGCTGTCGCCGCCCCTGATCGT GTCCGAGGAGCAGATCGGCGCGGTCTTCCGCACCATTCGCCAGGCGCTGGACGCGCTCGACTGA
Upstream 100 bases:
>100_bases CGCCATCTCGAAAGCGCCGCAGCGCTCAGGCGGCCGCCGGGCAATGGCCGCAAATCCACGTGATGATCACGACAAGACCC GCTCGTTCCGGAGTGTCCCC
Downstream 100 bases:
>100_bases GCGCGGCCGCGCCCGGCCATTTTGCGAGACCGGTGATCCACGGGCACGGGGGTTCCGTTTCCCTACTTTCGGAGAGCCCC CACGTGCGCAACACAGCCAA
Product: omega amino acid--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTTTSSAPHDPVLTDAQLNSFWMPFTPNRQFKTNPRLFVAAEGMHYIKPDGGRVLDAMAGLWCVNAGHGQRRIVEAIQAQ AAKLDFVSSFQMSHPAAFELAARIVAIAPDGLDHVFFTNSGSESVDTALKIARAYHRARGQGERIRFISRARAYHGMGWG GLSVSGLSRHRRDFGPLLPEIDHLPHTHDPERAAFSRGQPHWGVHFADELEKLLALHDPATVAAVIVEPVTGSGGVLPPP VGYLERLREICDRNGILLIFDEVITGFGRVGAAFAANAFGVTPDIITCAKGMTNGAVPMGGVIVHRNIHDTMMSGPAGIE LFHGYTYSAHPLACAAALATLDVYQEQDLFGRAERVAPLWENAVHALRQAPHVIDIRNIGLLAAIDLKPRDGAPGARGSE CAARCFEDGVLIRGSSDTLVLSPPLIVSEEQIGAVFRTIRQALDALD
Sequences:
>Translated_447_residues MTTTSSAPHDPVLTDAQLNSFWMPFTPNRQFKTNPRLFVAAEGMHYIKPDGGRVLDAMAGLWCVNAGHGQRRIVEAIQAQ AAKLDFVSSFQMSHPAAFELAARIVAIAPDGLDHVFFTNSGSESVDTALKIARAYHRARGQGERIRFISRARAYHGMGWG GLSVSGLSRHRRDFGPLLPEIDHLPHTHDPERAAFSRGQPHWGVHFADELEKLLALHDPATVAAVIVEPVTGSGGVLPPP VGYLERLREICDRNGILLIFDEVITGFGRVGAAFAANAFGVTPDIITCAKGMTNGAVPMGGVIVHRNIHDTMMSGPAGIE LFHGYTYSAHPLACAAALATLDVYQEQDLFGRAERVAPLWENAVHALRQAPHVIDIRNIGLLAAIDLKPRDGAPGARGSE CAARCFEDGVLIRGSSDTLVLSPPLIVSEEQIGAVFRTIRQALDALD >Mature_446_residues TTTSSAPHDPVLTDAQLNSFWMPFTPNRQFKTNPRLFVAAEGMHYIKPDGGRVLDAMAGLWCVNAGHGQRRIVEAIQAQA AKLDFVSSFQMSHPAAFELAARIVAIAPDGLDHVFFTNSGSESVDTALKIARAYHRARGQGERIRFISRARAYHGMGWGG LSVSGLSRHRRDFGPLLPEIDHLPHTHDPERAAFSRGQPHWGVHFADELEKLLALHDPATVAAVIVEPVTGSGGVLPPPV GYLERLREICDRNGILLIFDEVITGFGRVGAAFAANAFGVTPDIITCAKGMTNGAVPMGGVIVHRNIHDTMMSGPAGIEL FHGYTYSAHPLACAAALATLDVYQEQDLFGRAERVAPLWENAVHALRQAPHVIDIRNIGLLAAIDLKPRDGAPGARGSEC AARCFEDGVLIRGSSDTLVLSPPLIVSEEQIGAVFRTIRQALDALD
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI37574042, Length=431, Percent_Identity=29.9303944315545, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI226442705, Length=431, Percent_Identity=30.1624129930394, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI4557809, Length=405, Percent_Identity=28.1481481481481, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI226442709, Length=395, Percent_Identity=30.8860759493671, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI284507298, Length=328, Percent_Identity=29.5731707317073, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI13994255, Length=419, Percent_Identity=26.7303102625298, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI24119277, Length=429, Percent_Identity=26.8065268065268, Blast_Score=120, Evalue=4e-27, Organism=Escherichia coli, GI145693181, Length=406, Percent_Identity=34.7290640394089, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1786991, Length=432, Percent_Identity=31.712962962963, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1789759, Length=422, Percent_Identity=28.9099526066351, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1789016, Length=418, Percent_Identity=29.4258373205742, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1788044, Length=400, Percent_Identity=29.25, Blast_Score=151, Evalue=7e-38, Organism=Escherichia coli, GI1787560, Length=416, Percent_Identity=28.125, Blast_Score=141, Evalue=7e-35, Organism=Escherichia coli, GI1786349, Length=335, Percent_Identity=28.955223880597, Blast_Score=93, Evalue=4e-20, Organism=Caenorhabditis elegans, GI32564660, Length=439, Percent_Identity=28.4738041002278, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI25144271, Length=412, Percent_Identity=26.2135922330097, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI71992977, Length=446, Percent_Identity=28.0269058295964, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI25144274, Length=215, Percent_Identity=31.6279069767442, Blast_Score=108, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6323470, Length=420, Percent_Identity=28.0952380952381, Blast_Score=162, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6324386, Length=476, Percent_Identity=25.4201680672269, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6324432, Length=457, Percent_Identity=26.6958424507659, Blast_Score=134, Evalue=3e-32, Organism=Drosophila melanogaster, GI21357415, Length=413, Percent_Identity=28.8135593220339, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI161085790, Length=450, Percent_Identity=29.5555555555556, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI28574759, Length=434, Percent_Identity=29.7235023041475, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI21356575, Length=430, Percent_Identity=26.9767441860465, Blast_Score=122, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 48250; Mature: 48118
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSSAPHDPVLTDAQLNSFWMPFTPNRQFKTNPRLFVAAEGMHYIKPDGGRVLDAMAG CCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHH LWCVNAGHGQRRIVEAIQAQAAKLDFVSSFQMSHPAAFELAARIVAIAPDGLDHVFFTNS HEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCCCEEEEECC GSESVDTALKIARAYHRARGQGERIRFISRARAYHGMGWGGLSVSGLSRHRRDFGPLLPE CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCH IDHLPHTHDPERAAFSRGQPHWGVHFADELEKLLALHDPATVAAVIVEPVTGSGGVLPPP HHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCC VGYLERLREICDRNGILLIFDEVITGFGRVGAAFAANAFGVTPDIITCAKGMTNGAVPMG HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC GVIVHRNIHDTMMSGPAGIELFHGYTYSAHPLACAAALATLDVYQEQDLFGRAERVAPLW CEEEECCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENAVHALRQAPHVIDIRNIGLLAAIDLKPRDGAPGARGSECAARCFEDGVLIRGSSDTLV HHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCEEEECCCCEEE LSPPLIVSEEQIGAVFRTIRQALDALD ECCCCEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTTSSAPHDPVLTDAQLNSFWMPFTPNRQFKTNPRLFVAAEGMHYIKPDGGRVLDAMAG CCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHH LWCVNAGHGQRRIVEAIQAQAAKLDFVSSFQMSHPAAFELAARIVAIAPDGLDHVFFTNS HEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEECCCCCCEEEEECC GSESVDTALKIARAYHRARGQGERIRFISRARAYHGMGWGGLSVSGLSRHRRDFGPLLPE CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCH IDHLPHTHDPERAAFSRGQPHWGVHFADELEKLLALHDPATVAAVIVEPVTGSGGVLPPP HHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCC VGYLERLREICDRNGILLIFDEVITGFGRVGAAFAANAFGVTPDIITCAKGMTNGAVPMG HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCC GVIVHRNIHDTMMSGPAGIELFHGYTYSAHPLACAAALATLDVYQEQDLFGRAERVAPLW CEEEECCHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENAVHALRQAPHVIDIRNIGLLAAIDLKPRDGAPGARGSECAARCFEDGVLIRGSSDTLV HHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCEEEECCCCEEE LSPPLIVSEEQIGAVFRTIRQALDALD ECCCCEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]