| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gnl [H]
Identifier: 146339498
GI number: 146339498
Start: 2654751
End: 2655719
Strand: Reverse
Name: gnl [H]
Synonym: BRADO2487
Alternate gene names: 146339498
Gene position: 2655719-2654751 (Counterclockwise)
Preceding gene: 146339501
Following gene: 146339495
Centisome position: 35.62
GC content: 65.43
Gene sequence:
>969_bases ATGTCCGACGGAAACGCTCATGCGCAAGGCTTTCGCCCTGCCACCTTCTATCCCGATCCGGCGATCCAGGCGCTGGACCC GCGCTTCGAGAAGTACTGGCTCAAGCTGTCGGCTGTGGAGCGGCTGGCGACGGGCCTGCGCTGGGCGGAGGGGCCGGTGT GGTTCGGCGATGGGCGCTATCTCCTGTGCAGCGACATTCCCAACCAGCGCATCCTCAAATGGGAGGAGGAGACCGGCGCG GTGTCGGTGTTCCGCAAGCCGTCCAACTTCGCCAATGGCAACACCAGGGACCGGCAGGGCCGGCTCGTCACCTGCGAGCA TGGCGGCCGCCGCGTGACGCGGACCGAATATGACGGGTCCATTACCGTGCTGATGGACGCCTTCGACGGCAAGCGGCTGA ACTCGCCGAACGACGTCGTCGTCAAGTCCGACGGATCGATCTGGTTCACCGATCCGACCTTCGGACTGCTCGGCAATTAC GAGGGCTACAAGGCCGAGTCCGAGATCGACGCCAACGTGTACCGGATCGACGGCGCTACTGGCCAAGCGAGCATCGTTGC CGAGGGCGTGCTGGGACCGAACGGGCTGTGCTTCTCGCCTGATGAATCCATCCTCTATGTCGTCGAATCCCGCGGCGTGC CGAACCGCAAGATCCTCGCTTATGACGTCTCCGCTGACGGGACGATGCTTGCCAACAAGCGGGTCCACATCGATGCCGGG CCGGGCACGCCGGACGGCATGCGCTGCGACGTCGACGGCAATCTCTGGTGCGGCTGGGGCATGGGCTCGCCCGAGCTCGA CGGCGTCATGGTGTTCGCGCCCGATGGCGCCCCGATCGGACGCATCGCATTGCCCGAGCGCTGCGCCAATGTCTGTTTCG GCGGCCTCAAGCGCAACCGCCTGTTCATGGCCGCCAGCCAGTCGATCTACGCGCTCTACGTGAATACGCAGGGCGCGCTC GGCGGTTAA
Upstream 100 bases:
>100_bases ATACGTGGCATTTCATCCCTCGTGTTGGGTCCGCAGGTTTGCGGTCGTTACCTGTCAATGATAGCAGAGATCGCAACCGC GCAATAACAGGACGGGCCGA
Downstream 100 bases:
>100_bases GTCTTCGCTTCGCAGGGTGGGCAAAGGCGCGGAGCGCCGTGCCCACCGTTCTTGTTGATGGCGTAGATGGTGGGCACGCT TCGCTTTGCCCACCCTACGC
Product: putative gluconolactonase
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSDGNAHAQGFRPATFYPDPAIQALDPRFEKYWLKLSAVERLATGLRWAEGPVWFGDGRYLLCSDIPNQRILKWEEETGA VSVFRKPSNFANGNTRDRQGRLVTCEHGGRRVTRTEYDGSITVLMDAFDGKRLNSPNDVVVKSDGSIWFTDPTFGLLGNY EGYKAESEIDANVYRIDGATGQASIVAEGVLGPNGLCFSPDESILYVVESRGVPNRKILAYDVSADGTMLANKRVHIDAG PGTPDGMRCDVDGNLWCGWGMGSPELDGVMVFAPDGAPIGRIALPERCANVCFGGLKRNRLFMAASQSIYALYVNTQGAL GG
Sequences:
>Translated_322_residues MSDGNAHAQGFRPATFYPDPAIQALDPRFEKYWLKLSAVERLATGLRWAEGPVWFGDGRYLLCSDIPNQRILKWEEETGA VSVFRKPSNFANGNTRDRQGRLVTCEHGGRRVTRTEYDGSITVLMDAFDGKRLNSPNDVVVKSDGSIWFTDPTFGLLGNY EGYKAESEIDANVYRIDGATGQASIVAEGVLGPNGLCFSPDESILYVVESRGVPNRKILAYDVSADGTMLANKRVHIDAG PGTPDGMRCDVDGNLWCGWGMGSPELDGVMVFAPDGAPIGRIALPERCANVCFGGLKRNRLFMAASQSIYALYVNTQGAL GG >Mature_321_residues SDGNAHAQGFRPATFYPDPAIQALDPRFEKYWLKLSAVERLATGLRWAEGPVWFGDGRYLLCSDIPNQRILKWEEETGAV SVFRKPSNFANGNTRDRQGRLVTCEHGGRRVTRTEYDGSITVLMDAFDGKRLNSPNDVVVKSDGSIWFTDPTFGLLGNYE GYKAESEIDANVYRIDGATGQASIVAEGVLGPNGLCFSPDESILYVVESRGVPNRKILAYDVSADGTMLANKRVHIDAGP GTPDGMRCDVDGNLWCGWGMGSPELDGVMVFAPDGAPIGRIALPERCANVCFGGLKRNRLFMAASQSIYALYVNTQGALG G
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 35031; Mature: 34900
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGNAHAQGFRPATFYPDPAIQALDPRFEKYWLKLSAVERLATGLRWAEGPVWFGDGRY CCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCEECCCCEEECCCCE LLCSDIPNQRILKWEEETGAVSVFRKPSNFANGNTRDRQGRLVTCEHGGRRVTRTEYDGS EEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCE ITVLMDAFDGKRLNSPNDVVVKSDGSIWFTDPTFGLLGNYEGYKAESEIDANVYRIDGAT EEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEECCC GQASIVAEGVLGPNGLCFSPDESILYVVESRGVPNRKILAYDVSADGTMLANKRVHIDAG CCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCEEEEECC PGTPDGMRCDVDGNLWCGWGMGSPELDGVMVFAPDGAPIGRIALPERCANVCFGGLKRNR CCCCCCEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCCCEECHHHHHHHHHCCCCCCE LFMAASQSIYALYVNTQGALGG EEEEECCCEEEEEEECCCCCCC >Mature Secondary Structure SDGNAHAQGFRPATFYPDPAIQALDPRFEKYWLKLSAVERLATGLRWAEGPVWFGDGRY CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCEECCCCEEECCCCE LLCSDIPNQRILKWEEETGAVSVFRKPSNFANGNTRDRQGRLVTCEHGGRRVTRTEYDGS EEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCE ITVLMDAFDGKRLNSPNDVVVKSDGSIWFTDPTFGLLGNYEGYKAESEIDANVYRIDGAT EEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCCCCCCCCCCCEEEEEECCC GQASIVAEGVLGPNGLCFSPDESILYVVESRGVPNRKILAYDVSADGTMLANKRVHIDAG CCEEEEEECCCCCCCEEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEECCEEEEECC PGTPDGMRCDVDGNLWCGWGMGSPELDGVMVFAPDGAPIGRIALPERCANVCFGGLKRNR CCCCCCEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCCCEECHHHHHHHHHCCCCCCE LFMAASQSIYALYVNTQGALGG EEEEECCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]