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The map label for this gene is bkdR [H]

Identifier: 146339495

GI number: 146339495

Start: 2649726

End: 2650187

Strand: Reverse

Name: bkdR [H]

Synonym: BRADO2484

Alternate gene names: 146339495

Gene position: 2650187-2649726 (Counterclockwise)

Preceding gene: 146339498

Following gene: 146339494

Centisome position: 35.54

GC content: 64.07

Gene sequence:

>462_bases
ATGCCCGAACTCGACGTCATCGACCGCAAGATCCTCGGCCACCTCCAGGCCGACGGCCGCATCACCATGCAGGAGCTCGC
CGACAAGGTCGGCCTCTCCGTCTCGCCCTGCCACCGCCGGGTGAAGCTCCTGGAGGAGCGCGGCGTCATCACCCGCTACA
TCGCCACCGTCAACCAGAAGGCGCTCGGGCTGCACGTCTCGGTGTTCATCTCCATCAAGCTGGCCCGGCAGAAGGAGGAG
GACCTGAAGCGCTTCGAGAAGGCGATCTCGGCCTGGCCCGAGGTGCTGGAGTGCTATCTGATGACGGGCAATCGCGACTA
CATGCTGCGCGTGGTCGCGGCGGACCTGTCGTCGTATGAGGCATTCCTGAAGACCAAGCTGACGCGGCTCGACGGCATCG
CCTCGATCGAGTCGAGTTTTGCCCTGAGCCAGGTCAAGTACTCGATCGCACTTCCGGTGTGA

Upstream 100 bases:

>100_bases
AGTCCCGTCGAGCTGGCCATAATTCTCAATTTTTCGCGCATGGGCGAACATTATTGGGATATTTTCCCGTCAGAGCTATC
AATCCCGGCACAGCATCCCA

Downstream 100 bases:

>100_bases
GCCACGCCGCCTCGCCACGCCCCACCGTCGTCCCGGCGAACGCCGGGACCCATACTCCGCAGCAGGTGTGGTGAGACAAG
ACTGGGCCGACATCGTGCGC

Product: AsnC/Lrp family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPELDVIDRKILGHLQADGRITMQELADKVGLSVSPCHRRVKLLEERGVITRYIATVNQKALGLHVSVFISIKLARQKEE
DLKRFEKAISAWPEVLECYLMTGNRDYMLRVVAADLSSYEAFLKTKLTRLDGIASIESSFALSQVKYSIALPV

Sequences:

>Translated_153_residues
MPELDVIDRKILGHLQADGRITMQELADKVGLSVSPCHRRVKLLEERGVITRYIATVNQKALGLHVSVFISIKLARQKEE
DLKRFEKAISAWPEVLECYLMTGNRDYMLRVVAADLSSYEAFLKTKLTRLDGIASIESSFALSQVKYSIALPV
>Mature_152_residues
PELDVIDRKILGHLQADGRITMQELADKVGLSVSPCHRRVKLLEERGVITRYIATVNQKALGLHVSVFISIKLARQKEED
LKRFEKAISAWPEVLECYLMTGNRDYMLRVVAADLSSYEAFLKTKLTRLDGIASIESSFALSQVKYSIALPV

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=37.3333333333333, Blast_Score=119, Evalue=9e-29,
Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=38.9261744966443, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI1790182, Length=141, Percent_Identity=30.4964539007092, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17249; Mature: 17118

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPELDVIDRKILGHLQADGRITMQELADKVGLSVSPCHRRVKLLEERGVITRYIATVNQK
CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCH
ALGLHVSVFISIKLARQKEEDLKRFEKAISAWPEVLECYLMTGNRDYMLRVVAADLSSYE
HHHEEEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFLKTKLTRLDGIASIESSFALSQVKYSIALPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
PELDVIDRKILGHLQADGRITMQELADKVGLSVSPCHRRVKLLEERGVITRYIATVNQK
CCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCH
ALGLHVSVFISIKLARQKEEDLKRFEKAISAWPEVLECYLMTGNRDYMLRVVAADLSSYE
HHHEEEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AFLKTKLTRLDGIASIESSFALSQVKYSIALPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]