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The map label for this gene is 146339491

Identifier: 146339491

GI number: 146339491

Start: 2644308

End: 2645693

Strand: Reverse

Name: 146339491

Synonym: BRADO2480

Alternate gene names: NA

Gene position: 2645693-2644308 (Counterclockwise)

Preceding gene: 146339492

Following gene: 146339480

Centisome position: 35.48

GC content: 69.77

Gene sequence:

>1386_bases
ATGCCGCCGACCGTCGTTTCGCCAGACAGTCCCCTGCCGCGCCGACGGCGGCGTTTTCCCAAGCTGCTCGCGCTGGCGAG
CGTGCTGTCGTGTCTGACCGTGCTGCTCGCCGTCGGCACTTGGCTGTGGCAGCCGCAGACCCTGCGGATCGCGGTCGGGC
CTGCGGGCAGCGACGACGATGTTCTGGTGCGGGCGCTGGCGGACGCCTTCGACACCAGGGACAGCGCCCTCCGCCTGGTG
CCGGTCGCAACCGACGGACCGCTGCAGAGCATCACGATGCTCGCGAACGGACAGGCGGAGCTCGCCGTCGCGCGCGGCGA
CCTGCAGCTGCCGCCGACGGCCCGCTCGATGGCCATCCTCAGGCGCAATCTGCTGGTGCTGTGGGCGGCGCCGCGCGGGC
CGAAACCGAAGTCCGAGGCGCGCATCAAGGGCATGGCCGATCTCGCCGGACGCCGGCTGGGCGTTGTCGGCGTCAGCCAG
GTCAACGTTGCCCTGCTCCGGGTCGTGCTCGGCGAATCCGGAGTCAATCCGGACAAGGTGACGGTCGTGCAGTTCGGCGC
CAACCAGGTCTCCGAGATGACGGCAGATGCCACGCTCGACGCCTTCGCCATGGTCGGCGCGGTCAACGACAAGACCATCG
CGGATGCGATCGCCGCCACCGCGCGTCGCCGCGGCGAGCCGCGCTTCCTCGCCGTCGACGTCTCCGAGGCGATCGCCGAG
CGCCATCCGCTCTATGAGTCCGAGGAAATTCCAACCGGCGCCTTCGCCACCACGCCGCAGCGGCCGGACGACAAGATCGA
GACGGTTGGCATCAATCAGTTGATCATCGCCACCGCCGCGATGTCGGAGGAGACGGCCGGCGCCTTCGCGCGGCTGTTGT
TCACCGCCAAGGCACAGCTCGCCAAGACCGTGCCGGGCGCGGCCAGGATCCAGAAGCCCGACACCGACAAGGACGCCGCG
CTGCCCGCCCATCCCGGCGCCGCCGCCTATATCGACAACAACGAGCGCAGCTTCCTCGACAAATACAGCGACTATCTGTG
GGGCGCGGTGCTGATCCTGTCCGGCCTCGGCTCGGCCGCAGCCTGGCTGCGGCATTTCCTCAAGCGCGGCGAACGGCAGG
ACAACACCGATCATCGCGACCGCCTGCTCGCCGCGATCGCGTCAGCGCGCCAGGCCCAGACCTTGACGGAGCTCGACCAG
ATGCAGACCGAGGCTGATGCCATCCTGCGCGAGACGCTCGCCTGCCACGACGACGGCGCGATCGAGGACGGCGATCTCAC
CGCCTTCAACCTCGTGCTGATCCAGTTTCACGAAGCCGTCGCCAACCGCCGCGCCGCGCTGGCCGCGGAGGGACAACGCG
GGCTGGCGCCGGTGCGGAGCGCGTGA

Upstream 100 bases:

>100_bases
TCCCACGATCGTCGATCGCGTCGCAACTGTCACAACAGTGTATTACGGTGAGACCCCTGCCGGCCGCCGCCGCGCCGGCC
CACGAGGCCCGATCTCACCG

Downstream 100 bases:

>100_bases
GGTGCGGCAGGATTGAGACGGCAACGGACATTGGTGACGGACCGACGCCGGTAACATCAACGGCGCCGTCACTCCGGGGC
GCTCGCGACAGCGCGAGCCC

Product: putative transmembrane component

Products: NA

Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TAXI Family TRAP Transporter Solute Receptor; Transmembrane Component; Transport System Periplasmic Component; Signal Peptide; Trap Transporter Solute Receptor Taxi Family; TRAP-Type Transport System

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MPPTVVSPDSPLPRRRRRFPKLLALASVLSCLTVLLAVGTWLWQPQTLRIAVGPAGSDDDVLVRALADAFDTRDSALRLV
PVATDGPLQSITMLANGQAELAVARGDLQLPPTARSMAILRRNLLVLWAAPRGPKPKSEARIKGMADLAGRRLGVVGVSQ
VNVALLRVVLGESGVNPDKVTVVQFGANQVSEMTADATLDAFAMVGAVNDKTIADAIAATARRRGEPRFLAVDVSEAIAE
RHPLYESEEIPTGAFATTPQRPDDKIETVGINQLIIATAAMSEETAGAFARLLFTAKAQLAKTVPGAARIQKPDTDKDAA
LPAHPGAAAYIDNNERSFLDKYSDYLWGAVLILSGLGSAAAWLRHFLKRGERQDNTDHRDRLLAAIASARQAQTLTELDQ
MQTEADAILRETLACHDDGAIEDGDLTAFNLVLIQFHEAVANRRAALAAEGQRGLAPVRSA

Sequences:

>Translated_461_residues
MPPTVVSPDSPLPRRRRRFPKLLALASVLSCLTVLLAVGTWLWQPQTLRIAVGPAGSDDDVLVRALADAFDTRDSALRLV
PVATDGPLQSITMLANGQAELAVARGDLQLPPTARSMAILRRNLLVLWAAPRGPKPKSEARIKGMADLAGRRLGVVGVSQ
VNVALLRVVLGESGVNPDKVTVVQFGANQVSEMTADATLDAFAMVGAVNDKTIADAIAATARRRGEPRFLAVDVSEAIAE
RHPLYESEEIPTGAFATTPQRPDDKIETVGINQLIIATAAMSEETAGAFARLLFTAKAQLAKTVPGAARIQKPDTDKDAA
LPAHPGAAAYIDNNERSFLDKYSDYLWGAVLILSGLGSAAAWLRHFLKRGERQDNTDHRDRLLAAIASARQAQTLTELDQ
MQTEADAILRETLACHDDGAIEDGDLTAFNLVLIQFHEAVANRRAALAAEGQRGLAPVRSA
>Mature_460_residues
PPTVVSPDSPLPRRRRRFPKLLALASVLSCLTVLLAVGTWLWQPQTLRIAVGPAGSDDDVLVRALADAFDTRDSALRLVP
VATDGPLQSITMLANGQAELAVARGDLQLPPTARSMAILRRNLLVLWAAPRGPKPKSEARIKGMADLAGRRLGVVGVSQV
NVALLRVVLGESGVNPDKVTVVQFGANQVSEMTADATLDAFAMVGAVNDKTIADAIAATARRRGEPRFLAVDVSEAIAER
HPLYESEEIPTGAFATTPQRPDDKIETVGINQLIIATAAMSEETAGAFARLLFTAKAQLAKTVPGAARIQKPDTDKDAAL
PAHPGAAAYIDNNERSFLDKYSDYLWGAVLILSGLGSAAAWLRHFLKRGERQDNTDHRDRLLAAIASARQAQTLTELDQM
QTEADAILRETLACHDDGAIEDGDLTAFNLVLIQFHEAVANRRAALAAEGQRGLAPVRSA

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49305; Mature: 49174

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPTVVSPDSPLPRRRRRFPKLLALASVLSCLTVLLAVGTWLWQPQTLRIAVGPAGSDDD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
VLVRALADAFDTRDSALRLVPVATDGPLQSITMLANGQAELAVARGDLQLPPTARSMAIL
HHHHHHHHHHCCCCCCEEEEEECCCCCHHHEEEEECCCEEEEEEECCCCCCCCHHHHHHH
RRNLLVLWAAPRGPKPKSEARIKGMADLAGRRLGVVGVSQVNVALLRVVLGESGVNPDKV
HCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEECEEEHHHHHHHHHHHHHCCCCCCCCEE
TVVQFGANQVSEMTADATLDAFAMVGAVNDKTIADAIAATARRRGEPRFLAVDVSEAIAE
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
RHPLYESEEIPTGAFATTPQRPDDKIETVGINQLIIATAAMSEETAGAFARLLFTAKAQL
HCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AKTVPGAARIQKPDTDKDAALPAHPGAAAYIDNNERSFLDKYSDYLWGAVLILSGLGSAA
HHCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHH
AWLRHFLKRGERQDNTDHRDRLLAAIASARQAQTLTELDQMQTEADAILRETLACHDDGA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IEDGDLTAFNLVLIQFHEAVANRRAALAAEGQRGLAPVRSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PPTVVSPDSPLPRRRRRFPKLLALASVLSCLTVLLAVGTWLWQPQTLRIAVGPAGSDDD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
VLVRALADAFDTRDSALRLVPVATDGPLQSITMLANGQAELAVARGDLQLPPTARSMAIL
HHHHHHHHHHCCCCCCEEEEEECCCCCHHHEEEEECCCEEEEEEECCCCCCCCHHHHHHH
RRNLLVLWAAPRGPKPKSEARIKGMADLAGRRLGVVGVSQVNVALLRVVLGESGVNPDKV
HCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEECEEEHHHHHHHHHHHHHCCCCCCCCEE
TVVQFGANQVSEMTADATLDAFAMVGAVNDKTIADAIAATARRRGEPRFLAVDVSEAIAE
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
RHPLYESEEIPTGAFATTPQRPDDKIETVGINQLIIATAAMSEETAGAFARLLFTAKAQL
HCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AKTVPGAARIQKPDTDKDAALPAHPGAAAYIDNNERSFLDKYSDYLWGAVLILSGLGSAA
HHCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHH
AWLRHFLKRGERQDNTDHRDRLLAAIASARQAQTLTELDQMQTEADAILRETLACHDDGA
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IEDGDLTAFNLVLIQFHEAVANRRAALAAEGQRGLAPVRSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA