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The map label for this gene is ndoR [H]

Identifier: 146339492

GI number: 146339492

Start: 2645988

End: 2647241

Strand: Reverse

Name: ndoR [H]

Synonym: BRADO2481

Alternate gene names: 146339492

Gene position: 2647241-2645988 (Counterclockwise)

Preceding gene: 146339493

Following gene: 146339491

Centisome position: 35.5

GC content: 70.73

Gene sequence:

>1254_bases
ATGTCGAACTTCAGGACCGTCACCGTCAAGGGCCGCCAGTTCCGCGTCCGCGCAGGCGACGTGCTGCTCGATGGCGCGCT
GGCCAACGGCGTCGAGATTCCGTTCGACTGCCGCGCCGGCACCTGCGGCACCTGCATGGTTCACGTGTCCAAGGGCCAGA
CGGTGTGCGGCGAGACGCATACGCAGGGTATGATCTACGCCTGCCAGGCGCGCGTGGTGTCAGACCTCGATGTCGACGTG
GAGGATGTGCCGGAGATCGATACCTGCAAGGCGCGGCTCGTCGGCCTGCGCGAGGTCGCGCCCGACATCATGGAGCTGAT
GATCGCGCCGGAGAAGAGCATCAGCTACCTGCCGGGCCAGTACTTCAAGTTCACCTTCGCCGGCTATCCGGCGCGCGCCT
ACAGCCCGACCGCGTCGTTCGATGGCCGCATCGGCGGCCGCGTCATCCATCTCAACATCAAGAAGGTGCGCGGCGGCCGC
GTCACGCAGGCGCTCGGCAGCGGCATCCGGCCCGGGCACCGGCTGCGCATCCAGGGGCCGTATGGCCATGCGTTCCTGCG
GCCGGGCGGCGCCGGCCGCCTCGTGCTCGCCGGCAGCGGCACCGGCTTCGCACCGATCTGGGCGATCGCGGCGATGGCGC
TGCGCGAGAACCGCAGCCGCCCGATGGTGATCATCGCCGGCGCAAAGAAGCTGCCGCAGCTCTACATGACGCCGATCCTG
GCGCAGCTGGCGCGGCTGCCGAACGTCACGGTGATCCCGACCGTGGAGGAAGGCCCGGTCAATCATCCCTCGATCCGCAC
CGGACGGATCGAGCCGGCGATGCCGACGCTGACATCCACCGACGTCGTCTATGCCTGCGGCTCGCCGCGCATGGTCACCG
CGCTCGCCGGCATGGTGGAGAAGGCCGGCGCGACGTTCTATGCCGATCCGTTCGACTCGGCACCGCCCGAGGCGCCGTCG
GGCCTGATCGGCCGCATCAAGACCCTGGTGGCGCGGCGGCCGGCCGAGCCGGAGCCGAGCCGTGAGAGCGGCAAGGGCCA
CGACGCATCGCTTGATCCGTTCGCGCGGGCGCTGTCACTGGTGCCGAAGGATCCGATCGGGGACGATCTGGCGCCGCGCC
GCCCCGAGCCGCGCCGCAGCTCGGCCGCCGAGCGCGACCATGCGCTCTCGCTGGTCCGCGAGCTCGGCGATGCCGCCCAA
TTGCAGGACCGCCCCCGCCGCGCCGCCGGGCAGATGGCGTCGGGGCATGTGTGA

Upstream 100 bases:

>100_bases
AGAGCACGGCCAACAAGAACCTGATCCGCGTCTCGCCCGGCAAGGCGTGATCGGCACAAATCTTCCAACAGTCAAAGCGT
ATTCCATCGAGGAGTTGATC

Downstream 100 bases:

>100_bases
GGGGGGCGCCGTCGCGTCCGGCAGTTCGGACTTCATTCCTGTCCCAGGGCCGCCCCGAACACAGCCGTCATCCCCGCGAA
AGCGGGGATCCAGTACGCCG

Product: putative ferredoxin--NAD(+) reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSNFRTVTVKGRQFRVRAGDVLLDGALANGVEIPFDCRAGTCGTCMVHVSKGQTVCGETHTQGMIYACQARVVSDLDVDV
EDVPEIDTCKARLVGLREVAPDIMELMIAPEKSISYLPGQYFKFTFAGYPARAYSPTASFDGRIGGRVIHLNIKKVRGGR
VTQALGSGIRPGHRLRIQGPYGHAFLRPGGAGRLVLAGSGTGFAPIWAIAAMALRENRSRPMVIIAGAKKLPQLYMTPIL
AQLARLPNVTVIPTVEEGPVNHPSIRTGRIEPAMPTLTSTDVVYACGSPRMVTALAGMVEKAGATFYADPFDSAPPEAPS
GLIGRIKTLVARRPAEPEPSRESGKGHDASLDPFARALSLVPKDPIGDDLAPRRPEPRRSSAAERDHALSLVRELGDAAQ
LQDRPRRAAGQMASGHV

Sequences:

>Translated_417_residues
MSNFRTVTVKGRQFRVRAGDVLLDGALANGVEIPFDCRAGTCGTCMVHVSKGQTVCGETHTQGMIYACQARVVSDLDVDV
EDVPEIDTCKARLVGLREVAPDIMELMIAPEKSISYLPGQYFKFTFAGYPARAYSPTASFDGRIGGRVIHLNIKKVRGGR
VTQALGSGIRPGHRLRIQGPYGHAFLRPGGAGRLVLAGSGTGFAPIWAIAAMALRENRSRPMVIIAGAKKLPQLYMTPIL
AQLARLPNVTVIPTVEEGPVNHPSIRTGRIEPAMPTLTSTDVVYACGSPRMVTALAGMVEKAGATFYADPFDSAPPEAPS
GLIGRIKTLVARRPAEPEPSRESGKGHDASLDPFARALSLVPKDPIGDDLAPRRPEPRRSSAAERDHALSLVRELGDAAQ
LQDRPRRAAGQMASGHV
>Mature_416_residues
SNFRTVTVKGRQFRVRAGDVLLDGALANGVEIPFDCRAGTCGTCMVHVSKGQTVCGETHTQGMIYACQARVVSDLDVDVE
DVPEIDTCKARLVGLREVAPDIMELMIAPEKSISYLPGQYFKFTFAGYPARAYSPTASFDGRIGGRVIHLNIKKVRGGRV
TQALGSGIRPGHRLRIQGPYGHAFLRPGGAGRLVLAGSGTGFAPIWAIAAMALRENRSRPMVIIAGAKKLPQLYMTPILA
QLARLPNVTVIPTVEEGPVNHPSIRTGRIEPAMPTLTSTDVVYACGSPRMVTALAGMVEKAGATFYADPFDSAPPEAPSG
LIGRIKTLVARRPAEPEPSRESGKGHDASLDPFARALSLVPKDPIGDDLAPRRPEPRRSSAAERDHALSLVRELGDAAQL
QDRPRRAAGQMASGHV

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 44608; Mature: 44477

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFRTVTVKGRQFRVRAGDVLLDGALANGVEIPFDCRAGTCGTCMVHVSKGQTVCGETH
CCCCEEEEEECCEEEEEECCEEEECHHCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCC
TQGMIYACQARVVSDLDVDVEDVPEIDTCKARLVGLREVAPDIMELMIAPEKSISYLPGQ
CCCEEEEEEEHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YFKFTFAGYPARAYSPTASFDGRIGGRVIHLNIKKVRGGRVTQALGSGIRPGHRLRIQGP
EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCEEEEECC
YGHAFLRPGGAGRLVLAGSGTGFAPIWAIAAMALRENRSRPMVIIAGAKKLPQLYMTPIL
CCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
AQLARLPNVTVIPTVEEGPVNHPSIRTGRIEPAMPTLTSTDVVYACGSPRMVTALAGMVE
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
KAGATFYADPFDSAPPEAPSGLIGRIKTLVARRPAEPEPSRESGKGHDASLDPFARALSL
HCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
VPKDPIGDDLAPRRPEPRRSSAAERDHALSLVRELGDAAQLQDRPRRAAGQMASGHV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SNFRTVTVKGRQFRVRAGDVLLDGALANGVEIPFDCRAGTCGTCMVHVSKGQTVCGETH
CCCEEEEEECCEEEEEECCEEEECHHCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCC
TQGMIYACQARVVSDLDVDVEDVPEIDTCKARLVGLREVAPDIMELMIAPEKSISYLPGQ
CCCEEEEEEEHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YFKFTFAGYPARAYSPTASFDGRIGGRVIHLNIKKVRGGRVTQALGSGIRPGHRLRIQGP
EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCCCEEEEECC
YGHAFLRPGGAGRLVLAGSGTGFAPIWAIAAMALRENRSRPMVIIAGAKKLPQLYMTPIL
CCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
AQLARLPNVTVIPTVEEGPVNHPSIRTGRIEPAMPTLTSTDVVYACGSPRMVTALAGMVE
HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
KAGATFYADPFDSAPPEAPSGLIGRIKTLVARRPAEPEPSRESGKGHDASLDPFARALSL
HCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
VPKDPIGDDLAPRRPEPRRSSAAERDHALSLVRELGDAAQLQDRPRRAAGQMASGHV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]