Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yjiB [H]

Identifier: 146339369

GI number: 146339369

Start: 2503062

End: 2504225

Strand: Reverse

Name: yjiB [H]

Synonym: BRADO2350

Alternate gene names: 146339369

Gene position: 2504225-2503062 (Counterclockwise)

Preceding gene: 146339383

Following gene: 146339367

Centisome position: 33.58

GC content: 65.81

Gene sequence:

>1164_bases
ATGTTCACATTCGATCCGTATTCGCCGGCGGTCGATGCCGACCCGTTCCCGTTCTACAAGACCTTGCGCGACGAACATCC
CTGTTTCTGGAGCCCGCAGGCCCAGGTGTGGATCCTGTCGCGCTACGCCGATGTCGCGGCGGCCGGCACCAACTGGCAGA
CCTATTCCTCGGCCAAGGGCAACCTGATGACCGAACTGCCGAACCGCGCCGGCGCGACGCTCGGCACCACCGATCCGCCG
CGTCACGACCGCCTGCGCGGCCTCGTCCAGCACGCTTTCATGAAGCGCAATCTGGAGAGCCTGTCCGGCCCGATCCGCGA
CATCGCCCGGGACAGCGCCGAGTCGCTGCGCGGCCAGGAGCGCTTCGACTTCATCGAGGCGTTCTCGTCCAAGTTCACCG
TGCGTGTGCTGTTCGCCGCGCTCGGCCTGCCGCTCGGCGACGAGCAGACGGTGCGCGACAAGGCGGTGCTGATGGTGCAG
AGCGACCCGGTGAGCCGCGCCAAGGGGCCGCAGCACATTGCCGCCTACAATTGGATGCAGGACTATGCGGCCGGCGTGAT
CGCCGAGCGCCGCGCCCGGCCGCAGAACGATCTGATCTCGCATTTCAGCATGGCCGAGATCGACGGCGACAAGCTCGACG
AGCGCGAGGTGCTGCTGACGACGACCACCCTGATCATGGCCGGCATCGAGTCGCTCGGCGGCTTTATGAGCATGCTGGCC
TATAACCTGGCCGATCACCCAGACGCGCGGCGCGCGGTCGTCGCCAATCCCGATCTGCTGACGGATGCGGTCGAAGAGTC
GCTGCGCTTCAACACCTCGGCCCAACGCTTCCGACGCTGCCTGCAGAAGGATCTCACCCTGCATGGCCAAACCATGCGCG
AAGGCGACTTCGTCTGCCTCGCCTACGGCTCCGCCAATCGCGACGAGCGGCAGTTTCCCAATCCCGATGTCTACGACATC
ACCCGCAAGCCGCGCGGCCATCTCGGCTTCGGTGGCGGCGTGCATGCGTGCCTCGGCTCCGCGATCGCGCGCATGGCGAT
CAGGATCGCATTCGACGAGCTGCACAAGGTGGTGCCTGAGTATCGCCGCACCCAGGAGCAACTGCCCTGGATGCCGTCGT
CGACTTTCCGCAGCCCGTTATATCTGGAGCTGACGGTGCATTAG

Upstream 100 bases:

>100_bases
AGTCTTGACCGGCGTTCGTGTCTTACGCGGCGGCGACGCTCCGCTTAGGATCGTGAAAAGAACAACAACGACCATACTCA
ATGGAGAGGAGGCCCGACAG

Downstream 100 bases:

>100_bases
GTGCGGGAGTGAGAGTCCCATTGTGCAAGGCGCAGCGAACATAGTTGCCTCTCACCAGACAACAACATCCGCTCCACGTC
TTGGCGGGGAAGGACTAACG

Product: putative cytochrome P450

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKGNLMTELPNRAGATLGTTDPP
RHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQERFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQ
SDPVSRAKGPQHIAAYNWMQDYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA
YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCLAYGSANRDERQFPNPDVYDI
TRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPEYRRTQEQLPWMPSSTFRSPLYLELTVH

Sequences:

>Translated_387_residues
MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKGNLMTELPNRAGATLGTTDPP
RHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQERFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQ
SDPVSRAKGPQHIAAYNWMQDYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA
YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCLAYGSANRDERQFPNPDVYDI
TRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPEYRRTQEQLPWMPSSTFRSPLYLELTVH
>Mature_387_residues
MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKGNLMTELPNRAGATLGTTDPP
RHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQERFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQ
SDPVSRAKGPQHIAAYNWMQDYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA
YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCLAYGSANRDERQFPNPDVYDI
TRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPEYRRTQEQLPWMPSSTFRSPLYLELTVH

Specific function: Unknown

COG id: COG2124

COG function: function code Q; Cytochrome P450

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397
- InterPro:   IPR017972 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 43499; Mature: 43499

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKG
CCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCC
NLMTELPNRAGATLGTTDPPRHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQE
CHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
RFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQSDPVSRAKGPQHIAAYNWMQ
HHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCEEEEEEECCCCCCCCCCCHHHHHHHHH
DYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCL
HHHCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCCCEEEE
AYGSANRDERQFPNPDVYDITRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPE
EECCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRRTQEQLPWMPSSTFRSPLYLELTVH
HHHHHHHCCCCCCHHCCCCEEEEEEEC
>Mature Secondary Structure
MFTFDPYSPAVDADPFPFYKTLRDEHPCFWSPQAQVWILSRYADVAAAGTNWQTYSSAKG
CCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCC
NLMTELPNRAGATLGTTDPPRHDRLRGLVQHAFMKRNLESLSGPIRDIARDSAESLRGQE
CHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH
RFDFIEAFSSKFTVRVLFAALGLPLGDEQTVRDKAVLMVQSDPVSRAKGPQHIAAYNWMQ
HHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCEEEEEEECCCCCCCCCCCHHHHHHHHH
DYAAGVIAERRARPQNDLISHFSMAEIDGDKLDEREVLLTTTTLIMAGIESLGGFMSMLA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YNLADHPDARRAVVANPDLLTDAVEESLRFNTSAQRFRRCLQKDLTLHGQTMREGDFVCL
HHHCCCCCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCCCEEEE
AYGSANRDERQFPNPDVYDITRKPRGHLGFGGGVHACLGSAIARMAIRIAFDELHKVVPE
EECCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRRTQEQLPWMPSSTFRSPLYLELTVH
HHHHHHHCCCCCCHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]