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The map label for this gene is 146339242

Identifier: 146339242

GI number: 146339242

Start: 2343193

End: 2345385

Strand: Reverse

Name: 146339242

Synonym: BRADO2208

Alternate gene names: NA

Gene position: 2345385-2343193 (Counterclockwise)

Preceding gene: 146339243

Following gene: 146339241

Centisome position: 31.45

GC content: 61.88

Gene sequence:

>2193_bases
ATGCGACATCTTGGGGCTGTTGTTGCTCTGCAGCTCATCACGTTATTCCCGTTGAGCGCTCAGCCGATGATATTCTGGTT
CAACGATCCCGTCGGGCCGGACGACACCGTTATTGTCGAAGGATCGGACCTCGACGAGATCACATCAGCCAGCATCCGCA
GCATCTCGGATCAGCCCGCCGAGCAGACGGCTCGTCCCGAGCTCGCGCTCGAACTGCTGCAGAGGCAGAAGACGTCATTG
AAATTCATTGTCCCAAAGGATCTGGGCGAAGGTACCTATCGCTTCTCACTCAATGCACCTGCGGGTACGATCGACGGCCG
CCTCAATGTGCCGACGGTTTACTGGACGCAAGGCAGCCTCGGCCGCGAAGTCGCACCGGGCGGGCGGCTCGACATCTTCG
GCCGAAACATCGTCCGTCGGCCGGAGCGTACGCGTCTGCTCATGATCGCGGACGAAGGCGGCACGACCGTCACGACGTCG
CTGCTGAAAGGCGGGCTGTGGCGCGGCTCCTTCCGTGTGCCCGAGGCGGTACCAAACGGACGCTACCAACTCCGGCTTTT
CAACGGAGACGGAGCAGACCAGGACGGGGTGGACGCAGGCTCCATCACTTTACGAAGCCTCGATCCGAAGCGAGCGCCGT
CGTTCGACATTCGGGCCTATGGTGGCAATGGCGACGGCCGCGCCGACTCGTCCCGCGCGATGCGCGCGGCGCTCGCCGCA
GCGGCGGAGTCCGGCGGGGGAACGGTCTATATCCCGCGCGGTCGCTATTTGATGTCGGAGACTATCGTCATCCCGCCCGG
AGTCACGTTGAAGGGCGAAGGCATCGACCTCGTCAATCTGGTTTGGCCGGACTTTCCCGTTCCGCCTCCCTCGCTGATCC
AGGGCCAGTTCCGCTTTGCGATCGAGGACCTCACCATCTATGCCTCGAACCATCTTCACGTAATCAGCGGCGGCTTCGTG
TTCAGGGACACGATCGTTTCGAATGCCGGCGACATCGCCGTCAGACGCGTGCGCATACGCGCCTCGGCTTACCGAGGTCA
ACAGGATCTGGAAACGACCATCGCACGCATGCGCGAGTTTCGGCAGCTGTTTCCCGGTGGAGGCCCTGACACCATCCGCT
TGACCGGCAACCGGCTCGAAGTCGTCGATTGCGATATCCTCGGCACCGGGAATTCCATCCACCTGATCAGCGCCAGCGAC
GCCGTGATATCCCACAACGTCCTGTATAACGGCCGCGACGGCAACTACGCCCTGCGCGGATCGCGCCGGGTCATCTTTGA
AGGCAATACCGTCATCGGCGCGGATCTGCAGGCAACGGGAGGAGGCATCACGACCTTGACCCGTTCTGCAACCGGTTCCG
CGAACATCTTCATCGGCGGCAATACATTCAAGTTCATTCATGGCTGGGACCGCGAGGCGGCGACATCGGACGGTCCCGGC
GGGTACTATCATGGTCACGCCCTCAGCAAAGCTCCGAACCTGATTGAGCTGCAGGATGACGCATCGCCCTCCAGCGCAAC
AGCCGATTGGACCGGCGCACTCCTAATGGTCATGAACGGCCCTGGCGAGGGACAATACGCCCACATTGCATCCTTTCATC
GTGGCTCGCCTGGCGGTAGCGTGAATCTTGACGAACCCCTTCGGTATCCGCTGGATGCAACATCCGAGATCGTCGTCGTT
CAGGGCCACGAGAACTATTTGGTCGTTGACAACGTCTTCGAAGACACCGGAGTCTCCGCGCAATGCTTCGGCACCGGCCT
TGGCCACATCTTCGCTGGCAATCGCTCCAACCGCACGAGCGGCTTCGCCGTCGTGGGCCTGTCCTATGGCCAGCCACAGG
CATGCTGGCGCGTGCAGATTCTCGATAATGAGACCGATGAGGGAAATGTCTATCGAGCGGGCCCCGACCGAGATGTCTTC
TCGAACGAAGCGATGATCTTCGTGCGCGCCAATCAGACCGCCACCGGGGCGGGCCGCCCGCCGCTGGTCCGCGGCGTCAT
CATCCGAAACAATCGTATGCGCCACGATGCCCAGATCAGAATCGAGGGATTTTCGACAGCCTCCCCCGGTATCCGCGACG
TCGTGGTCGAAGGCAACGCCATCGGGCCATCGCGCGTCGGGCTGACCGTCGACCGCGGCGTGGCTGACTGGCTTGCACGC
CGAAATCTCATTGCGCCACGAATCCAGAAATGA

Upstream 100 bases:

>100_bases
GCCATCCGCGGTCTCAAGGATCCCGCAGCGATCCGCGGCGAGTTGCGGCGCCTGACCGGTCTCGCGATCGACCCCTGACA
AGGCATTCGGAGCCGCAGGT

Downstream 100 bases:

>100_bases
TGCGACGGCTCTGCGGAGATGGATCGACCGCCAACCTCCATCCAGCCGCTGAGCGGAGGTGTGACTCCTACCTCCTCGGC
CGGACAGTCACGCGGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MRHLGAVVALQLITLFPLSAQPMIFWFNDPVGPDDTVIVEGSDLDEITSASIRSISDQPAEQTARPELALELLQRQKTSL
KFIVPKDLGEGTYRFSLNAPAGTIDGRLNVPTVYWTQGSLGREVAPGGRLDIFGRNIVRRPERTRLLMIADEGGTTVTTS
LLKGGLWRGSFRVPEAVPNGRYQLRLFNGDGADQDGVDAGSITLRSLDPKRAPSFDIRAYGGNGDGRADSSRAMRAALAA
AAESGGGTVYIPRGRYLMSETIVIPPGVTLKGEGIDLVNLVWPDFPVPPPSLIQGQFRFAIEDLTIYASNHLHVISGGFV
FRDTIVSNAGDIAVRRVRIRASAYRGQQDLETTIARMREFRQLFPGGGPDTIRLTGNRLEVVDCDILGTGNSIHLISASD
AVISHNVLYNGRDGNYALRGSRRVIFEGNTVIGADLQATGGGITTLTRSATGSANIFIGGNTFKFIHGWDREAATSDGPG
GYYHGHALSKAPNLIELQDDASPSSATADWTGALLMVMNGPGEGQYAHIASFHRGSPGGSVNLDEPLRYPLDATSEIVVV
QGHENYLVVDNVFEDTGVSAQCFGTGLGHIFAGNRSNRTSGFAVVGLSYGQPQACWRVQILDNETDEGNVYRAGPDRDVF
SNEAMIFVRANQTATGAGRPPLVRGVIIRNNRMRHDAQIRIEGFSTASPGIRDVVVEGNAIGPSRVGLTVDRGVADWLAR
RNLIAPRIQK

Sequences:

>Translated_730_residues
MRHLGAVVALQLITLFPLSAQPMIFWFNDPVGPDDTVIVEGSDLDEITSASIRSISDQPAEQTARPELALELLQRQKTSL
KFIVPKDLGEGTYRFSLNAPAGTIDGRLNVPTVYWTQGSLGREVAPGGRLDIFGRNIVRRPERTRLLMIADEGGTTVTTS
LLKGGLWRGSFRVPEAVPNGRYQLRLFNGDGADQDGVDAGSITLRSLDPKRAPSFDIRAYGGNGDGRADSSRAMRAALAA
AAESGGGTVYIPRGRYLMSETIVIPPGVTLKGEGIDLVNLVWPDFPVPPPSLIQGQFRFAIEDLTIYASNHLHVISGGFV
FRDTIVSNAGDIAVRRVRIRASAYRGQQDLETTIARMREFRQLFPGGGPDTIRLTGNRLEVVDCDILGTGNSIHLISASD
AVISHNVLYNGRDGNYALRGSRRVIFEGNTVIGADLQATGGGITTLTRSATGSANIFIGGNTFKFIHGWDREAATSDGPG
GYYHGHALSKAPNLIELQDDASPSSATADWTGALLMVMNGPGEGQYAHIASFHRGSPGGSVNLDEPLRYPLDATSEIVVV
QGHENYLVVDNVFEDTGVSAQCFGTGLGHIFAGNRSNRTSGFAVVGLSYGQPQACWRVQILDNETDEGNVYRAGPDRDVF
SNEAMIFVRANQTATGAGRPPLVRGVIIRNNRMRHDAQIRIEGFSTASPGIRDVVVEGNAIGPSRVGLTVDRGVADWLAR
RNLIAPRIQK
>Mature_730_residues
MRHLGAVVALQLITLFPLSAQPMIFWFNDPVGPDDTVIVEGSDLDEITSASIRSISDQPAEQTARPELALELLQRQKTSL
KFIVPKDLGEGTYRFSLNAPAGTIDGRLNVPTVYWTQGSLGREVAPGGRLDIFGRNIVRRPERTRLLMIADEGGTTVTTS
LLKGGLWRGSFRVPEAVPNGRYQLRLFNGDGADQDGVDAGSITLRSLDPKRAPSFDIRAYGGNGDGRADSSRAMRAALAA
AAESGGGTVYIPRGRYLMSETIVIPPGVTLKGEGIDLVNLVWPDFPVPPPSLIQGQFRFAIEDLTIYASNHLHVISGGFV
FRDTIVSNAGDIAVRRVRIRASAYRGQQDLETTIARMREFRQLFPGGGPDTIRLTGNRLEVVDCDILGTGNSIHLISASD
AVISHNVLYNGRDGNYALRGSRRVIFEGNTVIGADLQATGGGITTLTRSATGSANIFIGGNTFKFIHGWDREAATSDGPG
GYYHGHALSKAPNLIELQDDASPSSATADWTGALLMVMNGPGEGQYAHIASFHRGSPGGSVNLDEPLRYPLDATSEIVVV
QGHENYLVVDNVFEDTGVSAQCFGTGLGHIFAGNRSNRTSGFAVVGLSYGQPQACWRVQILDNETDEGNVYRAGPDRDVF
SNEAMIFVRANQTATGAGRPPLVRGVIIRNNRMRHDAQIRIEGFSTASPGIRDVVVEGNAIGPSRVGLTVDRGVADWLAR
RNLIAPRIQK

Specific function: Unknown

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78582; Mature: 78582

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLGAVVALQLITLFPLSAQPMIFWFNDPVGPDDTVIVEGSDLDEITSASIRSISDQPA
CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCH
EQTARPELALELLQRQKTSLKFIVPKDLGEGTYRFSLNAPAGTIDGRLNVPTVYWTQGSL
HHHCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEECCEEEEECCCC
GREVAPGGRLDIFGRNIVRRPERTRLLMIADEGGTTVTTSLLKGGLWRGSFRVPEAVPNG
CCCCCCCCCEEEECCHHHCCCCCCEEEEEECCCCCEEEHHHHHCCCCCCCEECCCCCCCC
RYQLRLFNGDGADQDGVDAGSITLRSLDPKRAPSFDIRAYGGNGDGRADSSRAMRAALAA
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
AAESGGGTVYIPRGRYLMSETIVIPPGVTLKGEGIDLVNLVWPDFPVPPPSLIQGQFRFA
HHCCCCCEEEECCCCEEEECEEEECCCCEEECCCCEEEEEECCCCCCCCHHHHCCEEEEE
IEDLTIYASNHLHVISGGFVFRDTIVSNAGDIAVRRVRIRASAYRGQQDLETTIARMREF
EEEEEEEECCEEEEEECCEEEEEHHHCCCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHHH
RQLFPGGGPDTIRLTGNRLEVVDCDILGTGNSIHLISASDAVISHNVLYNGRDGNYALRG
HHHCCCCCCCEEEEECCEEEEEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCEEEEC
SRRVIFEGNTVIGADLQATGGGITTLTRSATGSANIFIGGNTFKFIHGWDREAATSDGPG
CEEEEEECCEEEECEEEECCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
GYYHGHALSKAPNLIELQDDASPSSATADWTGALLMVMNGPGEGQYAHIASFHRGSPGGS
CEECCCHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCC
VNLDEPLRYPLDATSEIVVVQGHENYLVVDNVFEDTGVSAQCFGTGLGHIFAGNRSNRTS
CCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCC
GFAVVGLSYGQPQACWRVQILDNETDEGNVYRAGPDRDVFSNEAMIFVRANQTATGAGRP
CEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
PLVRGVIIRNNRMRHDAQIRIEGFSTASPGIRDVVVEGNAIGPSRVGLTVDRGVADWLAR
CEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEECCCHHHHHHH
RNLIAPRIQK
CCCCCCCCCC
>Mature Secondary Structure
MRHLGAVVALQLITLFPLSAQPMIFWFNDPVGPDDTVIVEGSDLDEITSASIRSISDQPA
CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCH
EQTARPELALELLQRQKTSLKFIVPKDLGEGTYRFSLNAPAGTIDGRLNVPTVYWTQGSL
HHHCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEECCEEEEECCCC
GREVAPGGRLDIFGRNIVRRPERTRLLMIADEGGTTVTTSLLKGGLWRGSFRVPEAVPNG
CCCCCCCCCEEEECCHHHCCCCCCEEEEEECCCCCEEEHHHHHCCCCCCCEECCCCCCCC
RYQLRLFNGDGADQDGVDAGSITLRSLDPKRAPSFDIRAYGGNGDGRADSSRAMRAALAA
EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
AAESGGGTVYIPRGRYLMSETIVIPPGVTLKGEGIDLVNLVWPDFPVPPPSLIQGQFRFA
HHCCCCCEEEECCCCEEEECEEEECCCCEEECCCCEEEEEECCCCCCCCHHHHCCEEEEE
IEDLTIYASNHLHVISGGFVFRDTIVSNAGDIAVRRVRIRASAYRGQQDLETTIARMREF
EEEEEEEECCEEEEEECCEEEEEHHHCCCCCEEEEEEEEEEHHHCCHHHHHHHHHHHHHH
RQLFPGGGPDTIRLTGNRLEVVDCDILGTGNSIHLISASDAVISHNVLYNGRDGNYALRG
HHHCCCCCCCEEEEECCEEEEEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCEEEEC
SRRVIFEGNTVIGADLQATGGGITTLTRSATGSANIFIGGNTFKFIHGWDREAATSDGPG
CEEEEEECCEEEECEEEECCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
GYYHGHALSKAPNLIELQDDASPSSATADWTGALLMVMNGPGEGQYAHIASFHRGSPGGS
CEECCCHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCC
VNLDEPLRYPLDATSEIVVVQGHENYLVVDNVFEDTGVSAQCFGTGLGHIFAGNRSNRTS
CCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCC
GFAVVGLSYGQPQACWRVQILDNETDEGNVYRAGPDRDVFSNEAMIFVRANQTATGAGRP
CEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCC
PLVRGVIIRNNRMRHDAQIRIEGFSTASPGIRDVVVEGNAIGPSRVGLTVDRGVADWLAR
CEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEECCCHHHHHHH
RNLIAPRIQK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA