| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339241
Identifier: 146339241
GI number: 146339241
Start: 2341215
End: 2343014
Strand: Reverse
Name: 146339241
Synonym: BRADO2207
Alternate gene names: NA
Gene position: 2343014-2341215 (Counterclockwise)
Preceding gene: 146339242
Following gene: 146339240
Centisome position: 31.42
GC content: 62.83
Gene sequence:
>1800_bases ATGAGCGCGATTCTGGGGCTCAACATCAATCATCCCGATGCGTCCGCTGCTCTCATTCTGGACGGACGGGTCGTGGCCGC CGTCATGGAAGAGCGCTTCGGCCAAAGGATCAAGCACGACCCTTCCTTTCCCGAGCACGCGATCCGTTCCGTTCTGGCGA TCGGGGGCATCTCGGCAGCGGAGCTCGACTATATCGCAGTCGCCCGCGACACCAGCCAGAACCGCGCAGCCAAGATCTCC TATGTCCTGCAGAACCCGATTTCGGGCGGTATGGCTGCGTTCGAGCATTTCCGACGCGCCCGCTCGGACCTCGGTGTCGA GGCTCAGGTGGCACTGGCCTGCGGCCTCGCTCCGGACGCATTGAAAGCGAGGCTCGTGAACGTCGAGCACCATCTCTCGC ACATCGCCAGCGCTTATTATTGCTCGCCATTCGACGGCCTCACCGCCGGATTTTCTTATGACGGCAGCGGCGACTTCGTC AGCGCCATGGCCGCCCGCTGCGAAGGATCACGCATCGAGGTACTCGATCGCGTACGACTGCCCTCCAGCCTCGGCTTCTT CTACACGGCTTGTTGCCAGTTCATCGGGTTTGATCAATTCGGCGAGGAATACAAGGTCATGGGCCTCGCCCCCTATGGTG AGGATCGTTTCGCCGAAGCGATGCGCAAGCTCGTCGTCACGCATGACGATGCCTGGTTCAGCCTCGCCGACGGTTTCTTC GGCATGCACCGCGGCGGACACGATGCCAAGCTCGACGGCGACAACAGGATGAAGATGCTTCGTCTCTATTCGGACCGCTG GCGCGATCTGTTCGGCGAGCCACGCAGCCGCACCGAGGCGCTGTCGCAACGTGACATGGACATCGCTCGCTCGTGCCAGG TCCGGTTCGAGGAAATCGCCCTGCACTGCTTCAATCGGCTGCAACACTTGGTGCCGACTAGCCAGATCGCCTATGCGGGA GGCTGCGCACTGAACGGCGTGATGAACGCCCGGCTGCTGCGTGAGACCGCGTTCGATCGGGCCTACATGCAACCGGCTTC CTCGGACGACGGTCTCTCCGTCGGCGCGGCGCTGTGGACGTGGCATAACGTCGCCGGCGGCGGCGAGCGCTTCCACATGC AGCATGCCTATTGGGGCCCGGACCATTCGCAAGCTGCAATGCTGCGCGCCGCTGAGGCGACGGGAGCGCCGATGCGGGAA TTGCCTCTCGTGCAGGTACCGCAGGCCGTCGCGCGCCTGATCCATGCGGGACTCGTGGTCGGCTGGTATCAGGGCCGGTC CGAATGGGGTCCTCGTGCACTCGGTAATCGATCGATCCTCGCCGACCCCACCAAGGCCGACATGAAGGACATCATCAACG CCAAGATCAAGCGCCGCGAGAGCTTCCGGCCGTTTGCGCCCTCGGTATTGCGCTCGGCAGTCACGACCTATTTCGAGCAG GACGTCTTCAGCCCATTCATGATGCACGTCGTCAAGCTGAAGCCTGAATGGCGGCCCCGCCTGCCGGCGATCACGCATGT GGACGGCACGGGACGGTTGCAGAGCATCGATCGCGACACCAATCCGCTCTACTACAGCGTCATCGAGTGTTTCGGTCAGC TATCCGGCGTACCGATCGTGCTGAACACCAGCTTCAACGAAAACGAGCCGATCGTCGACACGCCCCAGCAGGCCGCCGAC TGCTTCATGCGCACGGGTCTCGATGCGCTCTGTCTCGGTCCCTACCTGCTGGTCAAGGGCGAGCATCTGCATGAGCTTGC CAACGCGTGCATGGAAAGTTCGGTCGCCCTGCCCTCATAG
Upstream 100 bases:
>100_bases GCCGGACAGTCACGCGGCTGATATGATGCAATGATATTGGCCACCTCCGATATTGTTACATTTCGGTAGCGTGGCCAACC GGGTATCTGGAAAATCGTTC
Downstream 100 bases:
>100_bases GTCGCATCATGGTCAATGTGCTCGAGCGCGCAGGAAGCACGCGCCAATCCGCTCTGCAGCCGGTGCTACGGACCCGCAGC GTTTGCCCGCTGTGCAAAAG
Product: putative carbamoyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MSAILGLNINHPDASAALILDGRVVAAVMEERFGQRIKHDPSFPEHAIRSVLAIGGISAAELDYIAVARDTSQNRAAKIS YVLQNPISGGMAAFEHFRRARSDLGVEAQVALACGLAPDALKARLVNVEHHLSHIASAYYCSPFDGLTAGFSYDGSGDFV SAMAARCEGSRIEVLDRVRLPSSLGFFYTACCQFIGFDQFGEEYKVMGLAPYGEDRFAEAMRKLVVTHDDAWFSLADGFF GMHRGGHDAKLDGDNRMKMLRLYSDRWRDLFGEPRSRTEALSQRDMDIARSCQVRFEEIALHCFNRLQHLVPTSQIAYAG GCALNGVMNARLLRETAFDRAYMQPASSDDGLSVGAALWTWHNVAGGGERFHMQHAYWGPDHSQAAMLRAAEATGAPMRE LPLVQVPQAVARLIHAGLVVGWYQGRSEWGPRALGNRSILADPTKADMKDIINAKIKRRESFRPFAPSVLRSAVTTYFEQ DVFSPFMMHVVKLKPEWRPRLPAITHVDGTGRLQSIDRDTNPLYYSVIECFGQLSGVPIVLNTSFNENEPIVDTPQQAAD CFMRTGLDALCLGPYLLVKGEHLHELANACMESSVALPS
Sequences:
>Translated_599_residues MSAILGLNINHPDASAALILDGRVVAAVMEERFGQRIKHDPSFPEHAIRSVLAIGGISAAELDYIAVARDTSQNRAAKIS YVLQNPISGGMAAFEHFRRARSDLGVEAQVALACGLAPDALKARLVNVEHHLSHIASAYYCSPFDGLTAGFSYDGSGDFV SAMAARCEGSRIEVLDRVRLPSSLGFFYTACCQFIGFDQFGEEYKVMGLAPYGEDRFAEAMRKLVVTHDDAWFSLADGFF GMHRGGHDAKLDGDNRMKMLRLYSDRWRDLFGEPRSRTEALSQRDMDIARSCQVRFEEIALHCFNRLQHLVPTSQIAYAG GCALNGVMNARLLRETAFDRAYMQPASSDDGLSVGAALWTWHNVAGGGERFHMQHAYWGPDHSQAAMLRAAEATGAPMRE LPLVQVPQAVARLIHAGLVVGWYQGRSEWGPRALGNRSILADPTKADMKDIINAKIKRRESFRPFAPSVLRSAVTTYFEQ DVFSPFMMHVVKLKPEWRPRLPAITHVDGTGRLQSIDRDTNPLYYSVIECFGQLSGVPIVLNTSFNENEPIVDTPQQAAD CFMRTGLDALCLGPYLLVKGEHLHELANACMESSVALPS >Mature_598_residues SAILGLNINHPDASAALILDGRVVAAVMEERFGQRIKHDPSFPEHAIRSVLAIGGISAAELDYIAVARDTSQNRAAKISY VLQNPISGGMAAFEHFRRARSDLGVEAQVALACGLAPDALKARLVNVEHHLSHIASAYYCSPFDGLTAGFSYDGSGDFVS AMAARCEGSRIEVLDRVRLPSSLGFFYTACCQFIGFDQFGEEYKVMGLAPYGEDRFAEAMRKLVVTHDDAWFSLADGFFG MHRGGHDAKLDGDNRMKMLRLYSDRWRDLFGEPRSRTEALSQRDMDIARSCQVRFEEIALHCFNRLQHLVPTSQIAYAGG CALNGVMNARLLRETAFDRAYMQPASSDDGLSVGAALWTWHNVAGGGERFHMQHAYWGPDHSQAAMLRAAEATGAPMREL PLVQVPQAVARLIHAGLVVGWYQGRSEWGPRALGNRSILADPTKADMKDIINAKIKRRESFRPFAPSVLRSAVTTYFEQD VFSPFMMHVVKLKPEWRPRLPAITHVDGTGRLQSIDRDTNPLYYSVIECFGQLSGVPIVLNTSFNENEPIVDTPQQAADC FMRTGLDALCLGPYLLVKGEHLHELANACMESSVALPS
Specific function: Unknown
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 66101; Mature: 65970
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAILGLNINHPDASAALILDGRVVAAVMEERFGQRIKHDPSFPEHAIRSVLAIGGISAA CCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH ELDYIAVARDTSQNRAAKISYVLQNPISGGMAAFEHFRRARSDLGVEAQVALACGLAPDA HCCEEEEECCCCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHH LKARLVNVEHHLSHIASAYYCSPFDGLTAGFSYDGSGDFVSAMAARCEGSRIEVLDRVRL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCC PSSLGFFYTACCQFIGFDQFGEEYKVMGLAPYGEDRFAEAMRKLVVTHDDAWFSLADGFF CHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH GMHRGGHDAKLDGDNRMKMLRLYSDRWRDLFGEPRSRTEALSQRDMDIARSCQVRFEEIA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHH LHCFNRLQHLVPTSQIAYAGGCALNGVMNARLLRETAFDRAYMQPASSDDGLSVGAALWT HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH WHNVAGGGERFHMQHAYWGPDHSQAAMLRAAEATGAPMRELPLVQVPQAVARLIHAGLVV HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHE GWYQGRSEWGPRALGNRSILADPTKADMKDIINAKIKRRESFRPFAPSVLRSAVTTYFEQ EEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DVFSPFMMHVVKLKPEWRPRLPAITHVDGTGRLQSIDRDTNPLYYSVIECFGQLSGVPIV HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEE LNTSFNENEPIVDTPQQAADCFMRTGLDALCLGPYLLVKGEHLHELANACMESSVALPS EECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAILGLNINHPDASAALILDGRVVAAVMEERFGQRIKHDPSFPEHAIRSVLAIGGISAA CEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH ELDYIAVARDTSQNRAAKISYVLQNPISGGMAAFEHFRRARSDLGVEAQVALACGLAPDA HCCEEEEECCCCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHH LKARLVNVEHHLSHIASAYYCSPFDGLTAGFSYDGSGDFVSAMAARCEGSRIEVLDRVRL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCC PSSLGFFYTACCQFIGFDQFGEEYKVMGLAPYGEDRFAEAMRKLVVTHDDAWFSLADGFF CHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH GMHRGGHDAKLDGDNRMKMLRLYSDRWRDLFGEPRSRTEALSQRDMDIARSCQVRFEEIA HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHH LHCFNRLQHLVPTSQIAYAGGCALNGVMNARLLRETAFDRAYMQPASSDDGLSVGAALWT HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH WHNVAGGGERFHMQHAYWGPDHSQAAMLRAAEATGAPMRELPLVQVPQAVARLIHAGLVV HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHE GWYQGRSEWGPRALGNRSILADPTKADMKDIINAKIKRRESFRPFAPSVLRSAVTTYFEQ EEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DVFSPFMMHVVKLKPEWRPRLPAITHVDGTGRLQSIDRDTNPLYYSVIECFGQLSGVPIV HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEE LNTSFNENEPIVDTPQQAADCFMRTGLDALCLGPYLLVKGEHLHELANACMESSVALPS EECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]