| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is waaE [H]
Identifier: 146339243
GI number: 146339243
Start: 2345408
End: 2346319
Strand: Reverse
Name: waaE [H]
Synonym: BRADO2209
Alternate gene names: 146339243
Gene position: 2346319-2345408 (Counterclockwise)
Preceding gene: 146339244
Following gene: 146339242
Centisome position: 31.47
GC content: 58.33
Gene sequence:
>912_bases ATGACGCTTGCCGTCGTCATCCTGACGCACAACGAAGAGCGCCACATTGTCAGGGCGCTCGCTTCGGTCGCAAAGATTGC GACCGAGATCTTCGTGATCGACAGCTTCTCCAGCGATCGCACCGTCGAGCTTGCGAGGGTAACCGGTGCAATCGTGCTGC AGAACAAGTTCATCAACTATGCCAGGCAGTTCCAGTGGGCCCTGGACAACGCGCCGATCACTGCGGCATGGGTGATGCGC CTCGATGCCGATGAAATCATCGAAGGTGATCTCGCGGCCCGCATCAAGACCGAGCTGCCGCGGCTTCCCGAGGATGTCGT CGGTATCAATCTCAAACGGAAACATATCTTCCAGGGGAGGTGGATCCGCCATGGCGGGCGATATCCGCTGATACTTCTCC GAATCTGGCGCAGGGATCATGGACGGATCGAGAATCGCTGGATGGATGAGCACATGCTGCTCTGGGGCGGACGCACCGTC ACATTCGAAGGTGGGTTCTCCGACCACAACCTCAATGATCTCACTTTCTTCACCGAAAAGCACAACAAATACGCGACGCG AGAGGCTGTCGACGTCATCAACCAGCGTCGCCGTCTGTTTCCGAGCGACACAGCCCTGCCCGCTGAAGGGTCTCGACAGG CAGCGATCAAACGCTGGGTCAAAGAGACGATCTACAACAATATTCCATACCCGATCAGCACCACTGCCTATTTCCTCTAT CGCATGATCTTCCAGCTCGGCTTCCTCGACGGCAAGGAAGGGCTCGTGTATCATACGCTTCAGGGGTTTTGGTACCGCTT TCTCGTGGGCGCCAAGGTCTCGGAGATCGAGGCTGCCATCCGCGGTCTCAAGGATCCCGCAGCGATCCGCGGCGAGTTGC GGCGCCTGACCGGTCTCGCGATCGACCCCTGA
Upstream 100 bases:
>100_bases GATTGCGCCGACGGCGCAGCCCAGCAAGAAGTGAGCGAGAGGTCGGTCCTGGACGGGTCGATCGCATCCTCCTGCCCAAT CTAGCGGACACGCATCCGAC
Downstream 100 bases:
>100_bases CAAGGCATTCGGAGCCGCAGGTATGCGACATCTTGGGGCTGTTGTTGCTCTGCAGCTCATCACGTTATTCCCGTTGAGCG CTCAGCCGATGATATTCTGG
Product: putative group 2 family glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTLAVVILTHNEERHIVRALASVAKIATEIFVIDSFSSDRTVELARVTGAIVLQNKFINYARQFQWALDNAPITAAWVMR LDADEIIEGDLAARIKTELPRLPEDVVGINLKRKHIFQGRWIRHGGRYPLILLRIWRRDHGRIENRWMDEHMLLWGGRTV TFEGGFSDHNLNDLTFFTEKHNKYATREAVDVINQRRRLFPSDTALPAEGSRQAAIKRWVKETIYNNIPYPISTTAYFLY RMIFQLGFLDGKEGLVYHTLQGFWYRFLVGAKVSEIEAAIRGLKDPAAIRGELRRLTGLAIDP
Sequences:
>Translated_303_residues MTLAVVILTHNEERHIVRALASVAKIATEIFVIDSFSSDRTVELARVTGAIVLQNKFINYARQFQWALDNAPITAAWVMR LDADEIIEGDLAARIKTELPRLPEDVVGINLKRKHIFQGRWIRHGGRYPLILLRIWRRDHGRIENRWMDEHMLLWGGRTV TFEGGFSDHNLNDLTFFTEKHNKYATREAVDVINQRRRLFPSDTALPAEGSRQAAIKRWVKETIYNNIPYPISTTAYFLY RMIFQLGFLDGKEGLVYHTLQGFWYRFLVGAKVSEIEAAIRGLKDPAAIRGELRRLTGLAIDP >Mature_302_residues TLAVVILTHNEERHIVRALASVAKIATEIFVIDSFSSDRTVELARVTGAIVLQNKFINYARQFQWALDNAPITAAWVMRL DADEIIEGDLAARIKTELPRLPEDVVGINLKRKHIFQGRWIRHGGRYPLILLRIWRRDHGRIENRWMDEHMLLWGGRTVT FEGGFSDHNLNDLTFFTEKHNKYATREAVDVINQRRRLFPSDTALPAEGSRQAAIKRWVKETIYNNIPYPISTTAYFLYR MIFQLGFLDGKEGLVYHTLQGFWYRFLVGAKVSEIEAAIRGLKDPAAIRGELRRLTGLAIDP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34928; Mature: 34797
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAVVILTHNEERHIVRALASVAKIATEIFVIDSFSSDRTVELARVTGAIVLQNKFINY CEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEHHHHHHHHEEHHHHHHH ARQFQWALDNAPITAAWVMRLDADEIIEGDLAARIKTELPRLPEDVVGINLKRKHIFQGR HHHHHHHHCCCCEEEEEEEECCHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHCCC WIRHGGRYPLILLRIWRRDHGRIENRWMDEHMLLWGGRTVTFEGGFSDHNLNDLTFFTEK CEECCCCCCEEHHEEHHCCCCCHHHCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEEC HNKYATREAVDVINQRRRLFPSDTALPAEGSRQAAIKRWVKETIYNNIPYPISTTAYFLY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RMIFQLGFLDGKEGLVYHTLQGFWYRFLVGAKVSEIEAAIRGLKDPAAIRGELRRLTGLA HHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC IDP CCC >Mature Secondary Structure TLAVVILTHNEERHIVRALASVAKIATEIFVIDSFSSDRTVELARVTGAIVLQNKFINY EEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEHHHHHHHHEEHHHHHHH ARQFQWALDNAPITAAWVMRLDADEIIEGDLAARIKTELPRLPEDVVGINLKRKHIFQGR HHHHHHHHCCCCEEEEEEEECCHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHCCC WIRHGGRYPLILLRIWRRDHGRIENRWMDEHMLLWGGRTVTFEGGFSDHNLNDLTFFTEK CEECCCCCCEEHHEEHHCCCCCHHHCCCCCEEEEECCEEEEEECCCCCCCCCCEEEEEEC HNKYATREAVDVINQRRRLFPSDTALPAEGSRQAAIKRWVKETIYNNIPYPISTTAYFLY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RMIFQLGFLDGKEGLVYHTLQGFWYRFLVGAKVSEIEAAIRGLKDPAAIRGELRRLTGLA HHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC IDP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11371519 [H]