| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339172
Identifier: 146339172
GI number: 146339172
Start: 2265288
End: 2266580
Strand: Direct
Name: 146339172
Synonym: BRADO2131
Alternate gene names: NA
Gene position: 2265288-2266580 (Clockwise)
Preceding gene: 146339169
Following gene: 146339174
Centisome position: 30.38
GC content: 65.58
Gene sequence:
>1293_bases TTGGGGAGGCAGACCATGTCTGCGCTGTCGCGTCGCGAATTCCTGTTGTCGGGAGCGGCCAGCATGGCCGCCATGTCGGG GCCCGCTCTGGCGGCGATGGGGCCCGCCGACAAGTTCGACCTGGTGATCAAGGGGGGTGCCGTCATCGATCCCGGCCAAT CGCTGCGCGGCAAGCGCGACATCGGCATTCGCTGGGGCGTCATCGAAGCGATCGAGTCCGAGATCCCCGCCGAGCGGACG CAGCGTTCGATCGACGCAGCAGGCCGGCTGGTCATGCCGGGTCTCATTGACCTGCACAGCCACGTCTATCCCTATGGCTC GGCGATCGGCATCCCGCCGGATGAGCTGGTGCAATTCCAGGGCACGACGACAGTTGTCTCGGCCGGGGACGCAGGCGTAA ACAATCTTGCCGCGTTGCGGCGCTTCATCGTCGCTCAGTCGCGTGCACGCATCTACGCATTTGTGCATATCGCCAACAAC GGCTTGTCGGCGTTCCCGGTCGCCGAACTCTACAACATCGACAACGCACAGGTCGAGGCCTGCGCCATGGCGCTGGCCGA GAACCCGGACTTCCTGCTCGGCGTGAAGGTGCGCATGTCGGAGAACGTAATCTTCAAGCACGGGATCGAGCCGTTGAAAC GCGGCATCAAGGCGTGCGAGCTCTGCGGCTGGCCGGCGCGGATGATGGTCCATATCGGCGGCGTCGAGACCGGAGAGCTG ATGTCGCGGATCCTCGATCTGCTGCGGCCCGGCGATATCCTGACTCACGCCTATTCCGGTGCCCCGAACATCGCCGGCGC CTTCACCAACATCGTGCAGGATGGCAAGCTGCTGCCGGCCGCGCTCGCCGCCAAGCAGCGCGGTGTGATCTTCGATGTCG GCCATGGCGGCGGCAGCTTCGATTTCACCGTCGCGGACGTGGCCATCCCCGGCGGCTGCGGCCCGGACACGATCTCCTCG GACATTCACGTGTTCTCCGGCAACACACCCGGCATGCCATTCCTGCCCAACGTCATGGGCAAGTTCCTGGCGATGGGCTT CTCGCTGGAGCAGGTGGTGAGCATGACGACCTCGGCGCCGGCCAAGATCATCGGCCGGACGCCCAAGCTCGGCGCGCTGC AGGTCGGCGCCCCGGCCGACCTTGCGATCGTCGAACTGGTCGAGGGTCCCGTCACCTTCGTCGACACGCGTGGCAACAAG CGGGACGGCAAGCTGCAAATCAAGCCGGTGCAGACCGTGATCAACGGCGTGCCGTTCGGGCGGCCGTATCAATCGCCGTT CTCGGTGCGGTGA
Upstream 100 bases:
>100_bases GGTGCTGCGTGGGCGCCGTTGGCACAAAGTCTCATTCTTCGAGAGCCAGCCTTGCCGGTTTTGGGGACAAGGCGCATGCT GACGGCAACTACAAACAGAT
Downstream 100 bases:
>100_bases GCGGCGGCGCGATCAATCGCGCGCGCCGCCGCGCTCGATATTGGCCGACCGCGTGGGCACGCCGAACTCCTGATGGCACA CCTCGGCCAGCACGGCGATG
Product: putative aminohydrolase
Products: NA
Alternate protein names: Amidohydrolase; Amidohydrolase Family Protein; Metallo-Dependent Hydrolase; Aminohydrolase; Protein PhnM; LOW QUALITY PROTEIN Amidohydrolase
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGRQTMSALSRREFLLSGAASMAAMSGPALAAMGPADKFDLVIKGGAVIDPGQSLRGKRDIGIRWGVIEAIESEIPAERT QRSIDAAGRLVMPGLIDLHSHVYPYGSAIGIPPDELVQFQGTTTVVSAGDAGVNNLAALRRFIVAQSRARIYAFVHIANN GLSAFPVAELYNIDNAQVEACAMALAENPDFLLGVKVRMSENVIFKHGIEPLKRGIKACELCGWPARMMVHIGGVETGEL MSRILDLLRPGDILTHAYSGAPNIAGAFTNIVQDGKLLPAALAAKQRGVIFDVGHGGGSFDFTVADVAIPGGCGPDTISS DIHVFSGNTPGMPFLPNVMGKFLAMGFSLEQVVSMTTSAPAKIIGRTPKLGALQVGAPADLAIVELVEGPVTFVDTRGNK RDGKLQIKPVQTVINGVPFGRPYQSPFSVR
Sequences:
>Translated_430_residues MGRQTMSALSRREFLLSGAASMAAMSGPALAAMGPADKFDLVIKGGAVIDPGQSLRGKRDIGIRWGVIEAIESEIPAERT QRSIDAAGRLVMPGLIDLHSHVYPYGSAIGIPPDELVQFQGTTTVVSAGDAGVNNLAALRRFIVAQSRARIYAFVHIANN GLSAFPVAELYNIDNAQVEACAMALAENPDFLLGVKVRMSENVIFKHGIEPLKRGIKACELCGWPARMMVHIGGVETGEL MSRILDLLRPGDILTHAYSGAPNIAGAFTNIVQDGKLLPAALAAKQRGVIFDVGHGGGSFDFTVADVAIPGGCGPDTISS DIHVFSGNTPGMPFLPNVMGKFLAMGFSLEQVVSMTTSAPAKIIGRTPKLGALQVGAPADLAIVELVEGPVTFVDTRGNK RDGKLQIKPVQTVINGVPFGRPYQSPFSVR >Mature_429_residues GRQTMSALSRREFLLSGAASMAAMSGPALAAMGPADKFDLVIKGGAVIDPGQSLRGKRDIGIRWGVIEAIESEIPAERTQ RSIDAAGRLVMPGLIDLHSHVYPYGSAIGIPPDELVQFQGTTTVVSAGDAGVNNLAALRRFIVAQSRARIYAFVHIANNG LSAFPVAELYNIDNAQVEACAMALAENPDFLLGVKVRMSENVIFKHGIEPLKRGIKACELCGWPARMMVHIGGVETGELM SRILDLLRPGDILTHAYSGAPNIAGAFTNIVQDGKLLPAALAAKQRGVIFDVGHGGGSFDFTVADVAIPGGCGPDTISSD IHVFSGNTPGMPFLPNVMGKFLAMGFSLEQVVSMTTSAPAKIIGRTPKLGALQVGAPADLAIVELVEGPVTFVDTRGNKR DGKLQIKPVQTVINGVPFGRPYQSPFSVR
Specific function: Unknown
COG id: COG3964
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45362; Mature: 45231
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRQTMSALSRREFLLSGAASMAAMSGPALAAMGPADKFDLVIKGGAVIDPGQSLRGKRD CCHHHHHHHHHHHHHHHCHHHHHHCCCCCEEECCCCCCEEEEEECCEEECCCHHCCCCCC IGIRWGVIEAIESEIPAERTQRSIDAAGRLVMPGLIDLHSHVYPYGSAIGIPPDELVQFQ CCEEHHHHHHHHHHCCHHHHHHHHHHCCCEECCCHHHHHHCCCCCCCCCCCCHHHHEEEC GTTTVVSAGDAGVNNLAALRRFIVAQSRARIYAFVHIANNGLSAFPVAELYNIDNAQVEA CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHCCCCHHHHH CAMALAENPDFLLGVKVRMSENVIFKHGIEPLKRGIKACELCGWPARMMVHIGGVETGEL HHHHHHCCCCEEEEEEEEECCCCHHHCCCHHHHHHHHHHHHCCCCHHEEEEECCCCHHHH MSRILDLLRPGDILTHAYSGAPNIAGAFTNIVQDGKLLPAALAAKQRGVIFDVGHGGGSF HHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCCCCE DFTVADVAIPGGCGPDTISSDIHVFSGNTPGMPFLPNVMGKFLAMGFSLEQVVSMTTSAP EEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCC AKIIGRTPKLGALQVGAPADLAIVELVEGPVTFVDTRGNKRDGKLQIKPVQTVINGVPFG HHHHCCCCCCCEEEECCCCCHHHEEHHCCCEEEEECCCCCCCCEEEEEEHHHHHCCCCCC RPYQSPFSVR CCCCCCCCCC >Mature Secondary Structure GRQTMSALSRREFLLSGAASMAAMSGPALAAMGPADKFDLVIKGGAVIDPGQSLRGKRD CHHHHHHHHHHHHHHHCHHHHHHCCCCCEEECCCCCCEEEEEECCEEECCCHHCCCCCC IGIRWGVIEAIESEIPAERTQRSIDAAGRLVMPGLIDLHSHVYPYGSAIGIPPDELVQFQ CCEEHHHHHHHHHHCCHHHHHHHHHHCCCEECCCHHHHHHCCCCCCCCCCCCHHHHEEEC GTTTVVSAGDAGVNNLAALRRFIVAQSRARIYAFVHIANNGLSAFPVAELYNIDNAQVEA CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHCCCCHHHHH CAMALAENPDFLLGVKVRMSENVIFKHGIEPLKRGIKACELCGWPARMMVHIGGVETGEL HHHHHHCCCCEEEEEEEEECCCCHHHCCCHHHHHHHHHHHHCCCCHHEEEEECCCCHHHH MSRILDLLRPGDILTHAYSGAPNIAGAFTNIVQDGKLLPAALAAKQRGVIFDVGHGGGSF HHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCCCCE DFTVADVAIPGGCGPDTISSDIHVFSGNTPGMPFLPNVMGKFLAMGFSLEQVVSMTTSAP EEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCC AKIIGRTPKLGALQVGAPADLAIVELVEGPVTFVDTRGNKRDGKLQIKPVQTVINGVPFG HHHHCCCCCCCEEEECCCCCHHHEEHHCCCEEEEECCCCCCCCEEEEEEHHHHHCCCCCC RPYQSPFSVR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA