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The map label for this gene is kaiC [H]

Identifier: 146339132

GI number: 146339132

Start: 2220713

End: 2222233

Strand: Direct

Name: kaiC [H]

Synonym: BRADO2086

Alternate gene names: 146339132

Gene position: 2220713-2222233 (Clockwise)

Preceding gene: 146339131

Following gene: 146339133

Centisome position: 29.78

GC content: 64.5

Gene sequence:

>1521_bases
ATGACGGAGGAGCTTGCTGGCGGCACTCGCGAGCGCGAGGATCTCTCCCGCATTTCCACCGGAAGCGACGGCCTCGACGA
TATTCTCGGCGGCGGGCTCGATGCCAATCGGCTCTATCTTTACGAGGGGCGGCCCGGGACCGGCAAGACGACGATCGCGC
TGCAGTTTCTCTTGAAGGGCAAGAGTCTCGGCGAGCGGGCGCTCTACATCACGCTGTCCGAAACCAAGCGGGAGCTCGAG
GTCGTCGCCGAGCGGCACAGCTGGTCGCTCGACGGCGTCGACGTGTTCGAATTGGTGCCGCCGGAGACGACGCTCGATCC
GGAGCGGGAGCTCACCGTGTTTCATCCGGCGGAGGTCGAGCTCAGCGAAACCACCGGCCTGATGTTCAAGGAGGTCGAGC
GCATCGATCCCGCACGCGTCGTGATCGACAGCCTGTCCGAGCTCAGGTTGCTCGCGCAGAGCCCGCTGCGCTACCGCCGC
CAGGTGCTCGCCTTGAAGCATTTTTTCGCCAAGCGCAACTGCACGGTCATCCTGCTCGATGATCTCTCGTCCTCGCAGGA
TGACCTGCAACTGCATTCCGTGGCACATGGCGTCGTGATGCTGGAGCAGCTTGCCATCGAATATGGCGCGGAGCGCCGCC
GCCTGCGCGTGATCAAGATGCGCGGTATTTCGTTTCGCGGCGGCTTCCACGATTTCACCATCACCGAGGGCGGGTTGCGG
ATCTTTCCGCGGCTCGTCGCCTCCGAGCATCACCGCTCGTTCCTGGGCGAATACACGTCGAGCGGCAATGCAGAGCTCGA
TCAGCTGCTCGGCGGCGGGCTCGAACGCGGCACCAACGCATTGCTGATCGGCGCGGCCGGCGTCGGCAAATCATCGGTCG
CGCTGAGCTACGCGATCGCCGCGGCCGAACGTGGCGAGCATGCCGTGTTCTTTGCCTTCGATGAGGGGCGCGGCACCGTC
GAGGCGCGCGCGCGGACGCTCGGCCTGCCGCTCGAGCGGTACCTCGACTCCGGCTTGATCCGCTTCCAGCAGATCGATCC
GGCCGAGCTGTCGCCCGGCGAGTTCGGCGCCATCGTCCGGCGCAGCGTCGAAGGCGACCATGCCCGCGTCATGATCATCG
ACAGCCTCAACGGCTATCTCAATGCGATGCCGGACGAGCGCTTCTTAATTCTGCAGATGCACGAGCTCTTGAGCTATCTC
GGCCAGCAGGGCGTCCTGACCGTCCTCGTCCTTGCCCAAAACGGTTTGGTCGGGCCGATGGAGACGCCGCTGGACATCAG
CTATCTCAGCGACGCGGTGCTGATGCTGCGCTACTTCGAGGTTGCCGGGACCGTGCGCCGCGCTCTGTCCGTGGTCAAGA
AGCGCAGCGGCTATCACGAGCATACGATCCGGGAGTTTCGCTTGAGCGCCAAGGGAATCACCCTCGGTCCGCCGCTGACC
GATTTCAGCGGAATCTTCCTTGGCAATCCGCGCTTCTCCGGCGCCGTGATCCCCGATGTGGACAAGCGAGATGAGCACTG
A

Upstream 100 bases:

>100_bases
TGAATCGTGTTCCTTGTTGGATTGCCGCGGTGCTGGTGGGTCCGACGGTCCGCCCGCGTGGCAACCATTGCCATCTCGTC
ATTTCACCACGGAGCTTTGC

Downstream 100 bases:

>100_bases
GCAGGATCAGCGCGTTCTCCTCTTCGCGCCGATCGGGCGCGATGGTCCGGCCTCCGCGGAGCTGCTACGGAGCGCGAGGA
TCGATACGCAGATCTGCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MTEELAGGTREREDLSRISTGSDGLDDILGGGLDANRLYLYEGRPGTGKTTIALQFLLKGKSLGERALYITLSETKRELE
VVAERHSWSLDGVDVFELVPPETTLDPERELTVFHPAEVELSETTGLMFKEVERIDPARVVIDSLSELRLLAQSPLRYRR
QVLALKHFFAKRNCTVILLDDLSSSQDDLQLHSVAHGVVMLEQLAIEYGAERRRLRVIKMRGISFRGGFHDFTITEGGLR
IFPRLVASEHHRSFLGEYTSSGNAELDQLLGGGLERGTNALLIGAAGVGKSSVALSYAIAAAERGEHAVFFAFDEGRGTV
EARARTLGLPLERYLDSGLIRFQQIDPAELSPGEFGAIVRRSVEGDHARVMIIDSLNGYLNAMPDERFLILQMHELLSYL
GQQGVLTVLVLAQNGLVGPMETPLDISYLSDAVLMLRYFEVAGTVRRALSVVKKRSGYHEHTIREFRLSAKGITLGPPLT
DFSGIFLGNPRFSGAVIPDVDKRDEH

Sequences:

>Translated_506_residues
MTEELAGGTREREDLSRISTGSDGLDDILGGGLDANRLYLYEGRPGTGKTTIALQFLLKGKSLGERALYITLSETKRELE
VVAERHSWSLDGVDVFELVPPETTLDPERELTVFHPAEVELSETTGLMFKEVERIDPARVVIDSLSELRLLAQSPLRYRR
QVLALKHFFAKRNCTVILLDDLSSSQDDLQLHSVAHGVVMLEQLAIEYGAERRRLRVIKMRGISFRGGFHDFTITEGGLR
IFPRLVASEHHRSFLGEYTSSGNAELDQLLGGGLERGTNALLIGAAGVGKSSVALSYAIAAAERGEHAVFFAFDEGRGTV
EARARTLGLPLERYLDSGLIRFQQIDPAELSPGEFGAIVRRSVEGDHARVMIIDSLNGYLNAMPDERFLILQMHELLSYL
GQQGVLTVLVLAQNGLVGPMETPLDISYLSDAVLMLRYFEVAGTVRRALSVVKKRSGYHEHTIREFRLSAKGITLGPPLT
DFSGIFLGNPRFSGAVIPDVDKRDEH
>Mature_505_residues
TEELAGGTREREDLSRISTGSDGLDDILGGGLDANRLYLYEGRPGTGKTTIALQFLLKGKSLGERALYITLSETKRELEV
VAERHSWSLDGVDVFELVPPETTLDPERELTVFHPAEVELSETTGLMFKEVERIDPARVVIDSLSELRLLAQSPLRYRRQ
VLALKHFFAKRNCTVILLDDLSSSQDDLQLHSVAHGVVMLEQLAIEYGAERRRLRVIKMRGISFRGGFHDFTITEGGLRI
FPRLVASEHHRSFLGEYTSSGNAELDQLLGGGLERGTNALLIGAAGVGKSSVALSYAIAAAERGEHAVFFAFDEGRGTVE
ARARTLGLPLERYLDSGLIRFQQIDPAELSPGEFGAIVRRSVEGDHARVMIIDSLNGYLNAMPDERFLILQMHELLSYLG
QQGVLTVLVLAQNGLVGPMETPLDISYLSDAVLMLRYFEVAGTVRRALSVVKKRSGYHEHTIREFRLSAKGITLGPPLTD
FSGIFLGNPRFSGAVIPDVDKRDEH

Specific function: Core component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by actin

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR013503
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 55900; Mature: 55768

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS51146 KAIC ; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEELAGGTREREDLSRISTGSDGLDDILGGGLDANRLYLYEGRPGTGKTTIALQFLLKG
CCCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHEEEEEECCC
KSLGERALYITLSETKRELEVVAERHSWSLDGVDVFELVPPETTLDPERELTVFHPAEVE
CCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEE
LSETTGLMFKEVERIDPARVVIDSLSELRLLAQSPLRYRRQVLALKHFFAKRNCTVILLD
ECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEE
DLSSSQDDLQLHSVAHGVVMLEQLAIEYGAERRRLRVIKMRGISFRGGFHDFTITEGGLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEECCCCCEEEEECCCHH
IFPRLVASEHHRSFLGEYTSSGNAELDQLLGGGLERGTNALLIGAAGVGKSSVALSYAIA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
AAERGEHAVFFAFDEGRGTVEARARTLGLPLERYLDSGLIRFQQIDPAELSPGEFGAIVR
HHCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHH
RSVEGDHARVMIIDSLNGYLNAMPDERFLILQMHELLSYLGQQGVLTVLVLAQNGLVGPM
HCCCCCCEEEEEEECCCCHHCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
ETPLDISYLSDAVLMLRYFEVAGTVRRALSVVKKRSGYHEHTIREFRLSAKGITLGPPLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCCC
DFSGIFLGNPRFSGAVIPDVDKRDEH
CCCCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEELAGGTREREDLSRISTGSDGLDDILGGGLDANRLYLYEGRPGTGKTTIALQFLLKG
CCCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHEEEEEECCC
KSLGERALYITLSETKRELEVVAERHSWSLDGVDVFELVPPETTLDPERELTVFHPAEVE
CCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCEE
LSETTGLMFKEVERIDPARVVIDSLSELRLLAQSPLRYRRQVLALKHFFAKRNCTVILLD
ECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEE
DLSSSQDDLQLHSVAHGVVMLEQLAIEYGAERRRLRVIKMRGISFRGGFHDFTITEGGLR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEECCCCCEEEEECCCHH
IFPRLVASEHHRSFLGEYTSSGNAELDQLLGGGLERGTNALLIGAAGVGKSSVALSYAIA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
AAERGEHAVFFAFDEGRGTVEARARTLGLPLERYLDSGLIRFQQIDPAELSPGEFGAIVR
HHCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHHCCCCEEEECCCCCCCCCCHHHHHHH
RSVEGDHARVMIIDSLNGYLNAMPDERFLILQMHELLSYLGQQGVLTVLVLAQNGLVGPM
HCCCCCCEEEEEEECCCCHHCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
ETPLDISYLSDAVLMLRYFEVAGTVRRALSVVKKRSGYHEHTIREFRLSAKGITLGPPLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCCCCC
DFSGIFLGNPRFSGAVIPDVDKRDEH
CCCCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA