Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is kdgK [H]

Identifier: 146338866

GI number: 146338866

Start: 1929643

End: 1930539

Strand: Direct

Name: kdgK [H]

Synonym: BRADO1805

Alternate gene names: 146338866

Gene position: 1929643-1930539 (Clockwise)

Preceding gene: 146338865

Following gene: 146338867

Centisome position: 25.88

GC content: 70.23

Gene sequence:

>897_bases
GTGGAGTTCGCGCAGGAGGACGGAAGTCTGTTCCGGCGCGGTTTTGGCGGCGACACGCTCAACACGGCGCTCTATCTGTC
CCGTCTCGGCGTGCCGACGTCCTATGTGACGGCCCTCGGCGACGATCCGCTGAGCGCGATGATGCTGGCGGCCTGGCGGG
CCGAGGGCATCGACACCGCGGAGGTGCTGCGGGTCGAGGGCCGCGTGCCCGGCCTCTACATGATCGAGCGCGACGCCAGG
GGCGAACGCAGCTTCTTGTATTGGCGCGACCGTGCGCCGGCGCGCGAGCTGTTCGACCGCGCCGACCGCGACATGCTCGA
CCGACTCTCGCGCTTCGACTGGATCTATCTCTCCGGCATCAGCCTGTCGCTGTATGGCGAGACCGGCAAGGCCAAGCTGC
GCGAGCTGCTCACGGTGGCGCGCAAGCGCGGGGCGCGCGTGGTGTTCGACGGCAACTACCGGCCGCGCGGCTGGGCCAGC
CGCGAGATGGCGCAGCGCGCGTTTCGCGCCATCATGCCGCTGGTCGACATCGCGCTGCCGACGCTCGAGGACGAGCAGAT
GCTGTTCGGCGACGTCGATGCCTCGGTCTGCCTGCGCCGCTTCAGGGACGCGGGTGTCGGCGAGGTCGTCATCAAGCGCG
GCCCGCGTGGCTGCCTGATCCATGCCGAGGGCGTGCTGGTCGACATCGCGCCGCCCGCGGTGCTGCAGCCGATCGACACG
ACGGCTGCTGGTGATTCCTTCAACGCAGGATACCTCGCTGCTCGGATCAAGGGCGCGCCGCCGCGCAAGGCGGCGTTGGC
GGGGCATCGGCTCGCGGGTGCGGTGATCATGGCGCCAGGCGCGGTGATTCCGGCGGCGGCGATGCCGCGGGACATTCTGG
CACTGAGCGAGGCGTGA

Upstream 100 bases:

>100_bases
TCGAGCTCGCCAGCGATCGAAGCCGCGCGATGAAGGTTCATTTGACGTTTTAACGAGCGGATTGATGCCGATGAGAGTCG
CCTGCATCGGAGAGTGCATG

Downstream 100 bases:

>100_bases
TGAGCAATCCGGACAATCGCGCGAAGCTCGATGCGGTGTTTGCGCTCGCGCCGGTGATCCCGGTGATCACGATCGAGGAC
GCGGCCCAGGCCGTGCCGCT

Product: ketodeoxygluconokinase

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTAEVLRVEGRVPGLYMIERDAR
GERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGISLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWAS
REMAQRAFRAIMPLVDIALPTLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT
TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA

Sequences:

>Translated_298_residues
MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTAEVLRVEGRVPGLYMIERDAR
GERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGISLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWAS
REMAQRAFRAIMPLVDIALPTLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT
TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA
>Mature_298_residues
MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTAEVLRVEGRVPGLYMIERDAR
GERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGISLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWAS
REMAQRAFRAIMPLVDIALPTLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT
TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082281, Length=294, Percent_Identity=47.2789115646259, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI87081971, Length=270, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 32565; Mature: 32565

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTA
CCCCHHCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHH
EVLRVEGRVPGLYMIERDARGERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGI
HHEEECCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCEEEEECE
SLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWASREMAQRAFRAIMPLVDIALP
EEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
TLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT
CCCCCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCEEEECCCCHHHCCCCC
TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA
CCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHCEEEECCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTA
CCCCHHCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHH
EVLRVEGRVPGLYMIERDARGERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGI
HHEEECCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCEEEEECE
SLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWASREMAQRAFRAIMPLVDIALP
EEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
TLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT
CCCCCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCEEEECCCCHHHCCCCC
TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA
CCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHCEEEECCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157608 [H]