| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is kdgK [H]
Identifier: 146338866
GI number: 146338866
Start: 1929643
End: 1930539
Strand: Direct
Name: kdgK [H]
Synonym: BRADO1805
Alternate gene names: 146338866
Gene position: 1929643-1930539 (Clockwise)
Preceding gene: 146338865
Following gene: 146338867
Centisome position: 25.88
GC content: 70.23
Gene sequence:
>897_bases GTGGAGTTCGCGCAGGAGGACGGAAGTCTGTTCCGGCGCGGTTTTGGCGGCGACACGCTCAACACGGCGCTCTATCTGTC CCGTCTCGGCGTGCCGACGTCCTATGTGACGGCCCTCGGCGACGATCCGCTGAGCGCGATGATGCTGGCGGCCTGGCGGG CCGAGGGCATCGACACCGCGGAGGTGCTGCGGGTCGAGGGCCGCGTGCCCGGCCTCTACATGATCGAGCGCGACGCCAGG GGCGAACGCAGCTTCTTGTATTGGCGCGACCGTGCGCCGGCGCGCGAGCTGTTCGACCGCGCCGACCGCGACATGCTCGA CCGACTCTCGCGCTTCGACTGGATCTATCTCTCCGGCATCAGCCTGTCGCTGTATGGCGAGACCGGCAAGGCCAAGCTGC GCGAGCTGCTCACGGTGGCGCGCAAGCGCGGGGCGCGCGTGGTGTTCGACGGCAACTACCGGCCGCGCGGCTGGGCCAGC CGCGAGATGGCGCAGCGCGCGTTTCGCGCCATCATGCCGCTGGTCGACATCGCGCTGCCGACGCTCGAGGACGAGCAGAT GCTGTTCGGCGACGTCGATGCCTCGGTCTGCCTGCGCCGCTTCAGGGACGCGGGTGTCGGCGAGGTCGTCATCAAGCGCG GCCCGCGTGGCTGCCTGATCCATGCCGAGGGCGTGCTGGTCGACATCGCGCCGCCCGCGGTGCTGCAGCCGATCGACACG ACGGCTGCTGGTGATTCCTTCAACGCAGGATACCTCGCTGCTCGGATCAAGGGCGCGCCGCCGCGCAAGGCGGCGTTGGC GGGGCATCGGCTCGCGGGTGCGGTGATCATGGCGCCAGGCGCGGTGATTCCGGCGGCGGCGATGCCGCGGGACATTCTGG CACTGAGCGAGGCGTGA
Upstream 100 bases:
>100_bases TCGAGCTCGCCAGCGATCGAAGCCGCGCGATGAAGGTTCATTTGACGTTTTAACGAGCGGATTGATGCCGATGAGAGTCG CCTGCATCGGAGAGTGCATG
Downstream 100 bases:
>100_bases TGAGCAATCCGGACAATCGCGCGAAGCTCGATGCGGTGTTTGCGCTCGCGCCGGTGATCCCGGTGATCACGATCGAGGAC GCGGCCCAGGCCGTGCCGCT
Product: ketodeoxygluconokinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTAEVLRVEGRVPGLYMIERDAR GERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGISLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWAS REMAQRAFRAIMPLVDIALPTLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA
Sequences:
>Translated_298_residues MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTAEVLRVEGRVPGLYMIERDAR GERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGISLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWAS REMAQRAFRAIMPLVDIALPTLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA >Mature_298_residues MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTAEVLRVEGRVPGLYMIERDAR GERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGISLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWAS REMAQRAFRAIMPLVDIALPTLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=294, Percent_Identity=47.2789115646259, Blast_Score=258, Evalue=5e-70, Organism=Escherichia coli, GI87081971, Length=270, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 32565; Mature: 32565
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTA CCCCHHCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHH EVLRVEGRVPGLYMIERDARGERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGI HHEEECCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCEEEEECE SLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWASREMAQRAFRAIMPLVDIALP EEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT CCCCCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCEEEECCCCHHHCCCCC TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA CCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHCEEEECCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MEFAQEDGSLFRRGFGGDTLNTALYLSRLGVPTSYVTALGDDPLSAMMLAAWRAEGIDTA CCCCHHCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHH EVLRVEGRVPGLYMIERDARGERSFLYWRDRAPARELFDRADRDMLDRLSRFDWIYLSGI HHEEECCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCEEEEECE SLSLYGETGKAKLRELLTVARKRGARVVFDGNYRPRGWASREMAQRAFRAIMPLVDIALP EEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC TLEDEQMLFGDVDASVCLRRFRDAGVGEVVIKRGPRGCLIHAEGVLVDIAPPAVLQPIDT CCCCCCCEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCEEEECCCCHHHCCCCC TAAGDSFNAGYLAARIKGAPPRKAALAGHRLAGAVIMAPGAVIPAAAMPRDILALSEA CCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHCEEEECCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157608 [H]