| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is uxuA [H]
Identifier: 146338864
GI number: 146338864
Start: 1927315
End: 1928511
Strand: Direct
Name: uxuA [H]
Synonym: BRADO1803
Alternate gene names: 146338864
Gene position: 1927315-1928511 (Clockwise)
Preceding gene: 146338862
Following gene: 146338865
Centisome position: 25.85
GC content: 66.83
Gene sequence:
>1197_bases ATGCAACAGACGTGGCGCTGGTTCGGACCGGAGGATCCCATCACCCTGCCGCAGGTCCGCCAGACCGGCGCGACCGGCAT CGTCACGGCGCTGCATCACATTCCCTATGGCGAGGTGTGGAGCACCGACGAGATCATCAGACGCCTCGGGATGATCGAGC AAGACTCGTCATTGCGATTGCGGTGGAGCGTTGTCGAAAGCCTGCCGGTGTCGGAGGCGATCAAACTGGGCGAAGGTGAT CTCACCCCGCTGTTCGACAATTATCGGCAGTCGCTGCGCAACCTCGCGGCCTGCGGCATCACCACCGTGTGCTACAATTT CATGGCCGTGCTGGACTGGACGCGGACGGAGCTTGCGCATCGCCTGCCGGGCGGCGCCACGGCGCTGCGCTTCGACATGG ATCGTCTCGCCGCATTCGACTGCTATATCCTGGAGCGCCCAGGCGCCGAGGCCGAGTTCTCCGCCGACGTGCTCGACCGC GCCAAGGCGTGGGTGGCGCAGGCCTCGGAATCCGACAAGGACCGGCTGCTCGCGACCATCATGGCGGGCCTGCCCGGCGC CTATGAGCGCTACGACGTGCCCGGCCTGCGCCGCATGCTGGAGAAGTACCGTGGCATCGGCCATGCCGAGCTACGCGCCA ACTACGCGCGCTTCCTGCGCGAGGTTGTGCCGACGGCGGAGGATTGCGGCGTCAGCCTGTGCGTGCATCCGGACGATCCG CCGCGCGACCTGTTCGGTTTGCCGCGCGTGGTGTCGTCGGCCGATGATCTGCAGTTCATCGTCGATGCCGCGCCGTCGAA GTCGAACGGCCTCACCTTCTGCACCGGCGCGCTCGGCGCCGGCGGCCAGAACAACGTGCCGGCGATGGCCGCGCGCTTCG CGCCGCACATCCGCTTCGTACATTTGCGCAACGTCACCAAGATGCTCGACGGCTCCTTCATGGAGGCGGAGCATCTGCGC GGCGATGTCGACATGGTTAACGTGGTCACGATGTTGTTGACGGAGCAGGCCCGCCGCAAGACGGAGGGCGAGCCGGACTG GCGTATCCCGTTCCGGCCCGATCACGGTCATGAGCTGGCCGACGACATCGGCCGCGGCACCCATCCCGGCTATCCGCTGG TCGGCCGGCTCAAGGGCCTTGCCGAGATCCGAGGCGTAATGACGGCGGTGGCGGCCATCAACCGCTTGCCGGTCTGA
Upstream 100 bases:
>100_bases CGGCGTCGCAGGCGCCAAGCCCATTTCATGACGCAAAGCAGTGTGATCGATAGGCTGGAATCGGCGCGCGACAGGCCGGC GGACGCAGGGAGGGAATGAG
Downstream 100 bases:
>100_bases TCGCGTCGTGATCTAGGATCGACGGAGAAGACCAGACAGGGAGACCCGGCCCATGCGTGCCGTCGTGATTCACGCGCCCA AGGATCTGCGCATCGACAGC
Product: mannonate hydrolase
Products: NA
Alternate protein names: D-mannonate hydrolase [H]
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MQQTWRWFGPEDPITLPQVRQTGATGIVTALHHIPYGEVWSTDEIIRRLGMIEQDSSLRLRWSVVESLPVSEAIKLGEGD LTPLFDNYRQSLRNLAACGITTVCYNFMAVLDWTRTELAHRLPGGATALRFDMDRLAAFDCYILERPGAEAEFSADVLDR AKAWVAQASESDKDRLLATIMAGLPGAYERYDVPGLRRMLEKYRGIGHAELRANYARFLREVVPTAEDCGVSLCVHPDDP PRDLFGLPRVVSSADDLQFIVDAAPSKSNGLTFCTGALGAGGQNNVPAMAARFAPHIRFVHLRNVTKMLDGSFMEAEHLR GDVDMVNVVTMLLTEQARRKTEGEPDWRIPFRPDHGHELADDIGRGTHPGYPLVGRLKGLAEIRGVMTAVAAINRLPV
Sequences:
>Translated_398_residues MQQTWRWFGPEDPITLPQVRQTGATGIVTALHHIPYGEVWSTDEIIRRLGMIEQDSSLRLRWSVVESLPVSEAIKLGEGD LTPLFDNYRQSLRNLAACGITTVCYNFMAVLDWTRTELAHRLPGGATALRFDMDRLAAFDCYILERPGAEAEFSADVLDR AKAWVAQASESDKDRLLATIMAGLPGAYERYDVPGLRRMLEKYRGIGHAELRANYARFLREVVPTAEDCGVSLCVHPDDP PRDLFGLPRVVSSADDLQFIVDAAPSKSNGLTFCTGALGAGGQNNVPAMAARFAPHIRFVHLRNVTKMLDGSFMEAEHLR GDVDMVNVVTMLLTEQARRKTEGEPDWRIPFRPDHGHELADDIGRGTHPGYPLVGRLKGLAEIRGVMTAVAAINRLPV >Mature_398_residues MQQTWRWFGPEDPITLPQVRQTGATGIVTALHHIPYGEVWSTDEIIRRLGMIEQDSSLRLRWSVVESLPVSEAIKLGEGD LTPLFDNYRQSLRNLAACGITTVCYNFMAVLDWTRTELAHRLPGGATALRFDMDRLAAFDCYILERPGAEAEFSADVLDR AKAWVAQASESDKDRLLATIMAGLPGAYERYDVPGLRRMLEKYRGIGHAELRANYARFLREVVPTAEDCGVSLCVHPDDP PRDLFGLPRVVSSADDLQFIVDAAPSKSNGLTFCTGALGAGGQNNVPAMAARFAPHIRFVHLRNVTKMLDGSFMEAEHLR GDVDMVNVVTMLLTEQARRKTEGEPDWRIPFRPDHGHELADDIGRGTHPGYPLVGRLKGLAEIRGVMTAVAAINRLPV
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=391, Percent_Identity=52.6854219948849, Blast_Score=428, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 44128; Mature: 44128
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQTWRWFGPEDPITLPQVRQTGATGIVTALHHIPYGEVWSTDEIIRRLGMIEQDSSLRL CCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEE RWSVVESLPVSEAIKLGEGDLTPLFDNYRQSLRNLAACGITTVCYNFMAVLDWTRTELAH EEHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLPGGATALRFDMDRLAAFDCYILERPGAEAEFSADVLDRAKAWVAQASESDKDRLLATI HCCCCCEEEEECHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MAGLPGAYERYDVPGLRRMLEKYRGIGHAELRANYARFLREVVPTAEDCGVSLCVHPDDP HHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCC PRDLFGLPRVVSSADDLQFIVDAAPSKSNGLTFCTGALGAGGQNNVPAMAARFAPHIRFV CHHHHCCHHHHCCCCHHEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEE HLRNVTKMLDGSFMEAEHLRGDVDMVNVVTMLLTEQARRKTEGEPDWRIPFRPDHGHELA HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH DDIGRGTHPGYPLVGRLKGLAEIRGVMTAVAAINRLPV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQQTWRWFGPEDPITLPQVRQTGATGIVTALHHIPYGEVWSTDEIIRRLGMIEQDSSLRL CCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEE RWSVVESLPVSEAIKLGEGDLTPLFDNYRQSLRNLAACGITTVCYNFMAVLDWTRTELAH EEHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLPGGATALRFDMDRLAAFDCYILERPGAEAEFSADVLDRAKAWVAQASESDKDRLLATI HCCCCCEEEEECHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MAGLPGAYERYDVPGLRRMLEKYRGIGHAELRANYARFLREVVPTAEDCGVSLCVHPDDP HHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCC PRDLFGLPRVVSSADDLQFIVDAAPSKSNGLTFCTGALGAGGQNNVPAMAARFAPHIRFV CHHHHCCHHHHCCCCHHEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEE HLRNVTKMLDGSFMEAEHLRGDVDMVNVVTMLLTEQARRKTEGEPDWRIPFRPDHGHELA HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH DDIGRGTHPGYPLVGRLKGLAEIRGVMTAVAAINRLPV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA