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The map label for this gene is ybgF [C]

Identifier: 146338274

GI number: 146338274

Start: 1249142

End: 1250191

Strand: Direct

Name: ybgF [C]

Synonym: BRADO1178

Alternate gene names: 146338274

Gene position: 1249142-1250191 (Clockwise)

Preceding gene: 146338272

Following gene: 146338275

Centisome position: 16.75

GC content: 70.86

Gene sequence:

>1050_bases
ATGTCTCTTTCCAGGAGCGCGATCGCGGTTCTCGCAGCGCTCGTTGTTGTTTTCGCGCAGGCGGTCCCGACCCGGGCGAT
CGCCCAGGTCGATGACGATCCGGAGATCCGGATCCAGCGGCTCGAGAACCAGCTCCGGCAGCTGACCGGCCAGAACGAAG
AGCTGCAATACCGCAATCGTCAGCTCCAGGAGCAGCTTCGCCAGCTGCAGAACGGGGCGCAGCCTGCCGCTCCCGCGGCG
CAGCCGACTGCGGCGGCTCCGCCGCCTCCGACTCAGATCGCGCCGTCCTACAGCCAGCCCGCCCAGCCCGCCTATGGCCA
GCCGCAATATGGTCAGCAGCAGCCGGCCTATCCGCAGCAGCCGCCGCCGAGCTATCCGCCGGCACAGGCCGCGGCACCCG
CGCCGATCACGCAGGACCCGCCGGCCGCCGGCGGCGTCCGCCGCCGAGGCGATGCGTTCGATCCGAGCCAGAACCCGACT
GCGCCTGGCGCCCCGCAGGCGCTCGGCGGCGGCGCGCTGCCGATCCAGCCCGGCGGTGGGCAGCCTGCCGGCCGTCCGGC
GGGCGATCCGGCTGGTGTCGCCAACGCCGGGGCAGGGCGCTACCCGCAAGGTGCGCCGGTTGCCGCCGCGCCCGGCGCTG
CCGGGCTCGACACCGCGCCACCGCGGCAGACGCCGCGCGACGAATACGATCTCGGCATCGGCTACATGCAGCGCCGCGAC
TACGCGCTGGCCGAGCAGACGATGCGCAACTTCACCCAGAAATATCCGAACGATCCGATGATCGGCGACGCGCAATACTG
GCTCGGTGAAAGCCTGTACCGGCGCCAGCAATATCGCGATGCCGCCGAGATCTTCCTGACGGTGACGACCAAGCACGACA
AATCGTCGAAGGCGGCCGATGCGCTGCTGCGCCTCGGCCAGTCGCTGGCGGCCCTCAAGGAGAAGGAAGCGGCCTGCGCC
GCGTTCGGCGAGGTGACGCGCAAATACCCGCGCGCCTCGGCCGGCGTGAAGGCGGCCGTCGATCAGGAGCAGAAGCGCGT
GAAGTGCTGA

Upstream 100 bases:

>100_bases
ACGTCATTTGTCTCTATTGCCGTTCTGCCGTACAGCCCCATCCATTGGGCTATGTTTTCCAACCTCTCGCCGATCCGGTC
GTCAGGGCAGCATGTCGTTC

Downstream 100 bases:

>100_bases
CCGCGCGCGGCGCTTGTCGCGCGCGAAGGCCTTGAGTTTGTTGTTCCGGCGTCCGACGACTAATCTGGGTCGTCATGGCA
GCCCACGAGACCGCGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: L-Pal System YbgF; TPR Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide TPR2 Protein

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSLSRSAIAVLAALVVVFAQAVPTRAIAQVDDDPEIRIQRLENQLRQLTGQNEELQYRNRQLQEQLRQLQNGAQPAAPAA
QPTAAAPPPPTQIAPSYSQPAQPAYGQPQYGQQQPAYPQQPPPSYPPAQAAAPAPITQDPPAAGGVRRRGDAFDPSQNPT
APGAPQALGGGALPIQPGGGQPAGRPAGDPAGVANAGAGRYPQGAPVAAAPGAAGLDTAPPRQTPRDEYDLGIGYMQRRD
YALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRRQQYRDAAEIFLTVTTKHDKSSKAADALLRLGQSLAALKEKEAACA
AFGEVTRKYPRASAGVKAAVDQEQKRVKC

Sequences:

>Translated_349_residues
MSLSRSAIAVLAALVVVFAQAVPTRAIAQVDDDPEIRIQRLENQLRQLTGQNEELQYRNRQLQEQLRQLQNGAQPAAPAA
QPTAAAPPPPTQIAPSYSQPAQPAYGQPQYGQQQPAYPQQPPPSYPPAQAAAPAPITQDPPAAGGVRRRGDAFDPSQNPT
APGAPQALGGGALPIQPGGGQPAGRPAGDPAGVANAGAGRYPQGAPVAAAPGAAGLDTAPPRQTPRDEYDLGIGYMQRRD
YALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRRQQYRDAAEIFLTVTTKHDKSSKAADALLRLGQSLAALKEKEAACA
AFGEVTRKYPRASAGVKAAVDQEQKRVKC
>Mature_348_residues
SLSRSAIAVLAALVVVFAQAVPTRAIAQVDDDPEIRIQRLENQLRQLTGQNEELQYRNRQLQEQLRQLQNGAQPAAPAAQ
PTAAAPPPPTQIAPSYSQPAQPAYGQPQYGQQQPAYPQQPPPSYPPAQAAAPAPITQDPPAAGGVRRRGDAFDPSQNPTA
PGAPQALGGGALPIQPGGGQPAGRPAGDPAGVANAGAGRYPQGAPVAAAPGAAGLDTAPPRQTPRDEYDLGIGYMQRRDY
ALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRRQQYRDAAEIFLTVTTKHDKSSKAADALLRLGQSLAALKEKEAACAA
FGEVTRKYPRASAGVKAAVDQEQKRVKC

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=179, Percent_Identity=32.4022346368715, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37038; Mature: 36907

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRSAIAVLAALVVVFAQAVPTRAIAQVDDDPEIRIQRLENQLRQLTGQNEELQYRNR
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
QLQEQLRQLQNGAQPAAPAAQPTAAAPPPPTQIAPSYSQPAQPAYGQPQYGQQQPAYPQQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPSYPPAQAAAPAPITQDPPAAGGVRRRGDAFDPSQNPTAPGAPQALGGGALPIQPGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
QPAGRPAGDPAGVANAGAGRYPQGAPVAAAPGAAGLDTAPPRQTPRDEYDLGIGYMQRRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
YALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRRQQYRDAAEIFLTVTTKHDKSSKAAD
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHH
ALLRLGQSLAALKEKEAACAAFGEVTRKYPRASAGVKAAVDQEQKRVKC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLSRSAIAVLAALVVVFAQAVPTRAIAQVDDDPEIRIQRLENQLRQLTGQNEELQYRNR
CCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
QLQEQLRQLQNGAQPAAPAAQPTAAAPPPPTQIAPSYSQPAQPAYGQPQYGQQQPAYPQQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPPSYPPAQAAAPAPITQDPPAAGGVRRRGDAFDPSQNPTAPGAPQALGGGALPIQPGGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
QPAGRPAGDPAGVANAGAGRYPQGAPVAAAPGAAGLDTAPPRQTPRDEYDLGIGYMQRRD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
YALAEQTMRNFTQKYPNDPMIGDAQYWLGESLYRRQQYRDAAEIFLTVTTKHDKSSKAAD
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHH
ALLRLGQSLAALKEKEAACAAFGEVTRKYPRASAGVKAAVDQEQKRVKC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA