| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tilS [H]
Identifier: 146338275
GI number: 146338275
Start: 1250266
End: 1251369
Strand: Direct
Name: tilS [H]
Synonym: BRADO1179
Alternate gene names: 146338275
Gene position: 1250266-1251369 (Clockwise)
Preceding gene: 146338274
Following gene: 146338276
Centisome position: 16.77
GC content: 69.84
Gene sequence:
>1104_bases ATGGCAGCCCACGAGACCGCGCAGGCGAATCCTTCCGACGACGGCCGTCCCATCGGCGTGGCCGAAGCGGAGGTGCTGTT CGCTTCGCTCGCCGATGCGCCTGCGCTGGTGCTTGCCGTGTCCGGCGGCCCCGATTCGATGGCGCTGCTATGGCTGGCGG CTCGCTGGCGGCAGGCGCTGGCAGACGGGCCGCGACTGGTTGCAATCACCGTCGATCATGGCTTGCGGCCGGAAGCCCGG CGCGAAGCTGCGATGGTCAAGCGGTTCGCGCGGCAGCTCGAGGTTTCGCACCGGATGCTGCGCTGGACCGAGCCGAAGCC GACCACGGGAATTCCCGAAGCGGCGCGTCTGGCCAGATATCGCCTGCTGGCACGGGCTGCGCGGCAGGCCGGTGCAAGCC ACGTCCTCACCGCTCACACCCGCGACGATCAGGCCGAGACGGTGCTGATGCGGTTGCTGCGTGGCAGCGGCATCGTCGGG CTCGCGGCCATGGCACCGGTCAGCGCCCGCGACGGGCTGCTGCTGGCGCGCCCGCTGCTGGAGATTTCGAAGGCCCGGCT CGTCGCCACCCTTCGCTCGGCCGGGATCGAGTTTGCCGATGACCCCACCAACCACGATCCGGCCTATACGCGGCCGCGCT TGCGCGCGCTGATGCCGGCGCTGGCAGCCGAGGGTGGTGATTCGCGGACGCTGGCGACGCTCGCCGGCCGCCTCGCCCGC GCCAACGCGGCCATCGAGCTGATGGTCGATGGTGCCGAGAAGCACCTCGCGCTCCGCGCTTCGCGCGGCGGCTCGATCCG GCCTGCCCAGGGGCAGACGTTCGAGGCGCGCGCCTTTGTCGCACTTCCGGCGGAGATCAGGCTGAGATTGCTGATGCGGG CCATCAACCAGATTGGAACCGAGGGGCCGGTGGAACTCGGGAAGGCGGAAGCGCTGCTCGATCGCATGGACCGGACGATG GACCGGACTCTTGCGGGGGTCGCAAATGGTGGTACCTCTGCGGCGGGCAGGCTAAAACAAACCTTGGCTGGTGCGCTGGT AAGCATGACGCGCGAGGCCATTCGCATCACTCCGGCGCCGCCTCGTCGTCCGCGCCGGAGTTGA
Upstream 100 bases:
>100_bases AGGAGCAGAAGCGCGTGAAGTGCTGACCGCGCGCGGCGCTTGTCGCGCGCGAAGGCCTTGAGTTTGTTGTTCCGGCGTCC GACGACTAATCTGGGTCGTC
Downstream 100 bases:
>100_bases GACGGAGGCAGCCTTCGCTGACCCTTAACCACCTGCGTCGGCGGCGCTTTTCCCGCGCCTTTTTTTGAGCGGGAATCGGG CTAGGATGCGTTAAATAGTC
Product: tRNA(Ile)-lysidine synthase
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MAAHETAQANPSDDGRPIGVAEAEVLFASLADAPALVLAVSGGPDSMALLWLAARWRQALADGPRLVAITVDHGLRPEAR REAAMVKRFARQLEVSHRMLRWTEPKPTTGIPEAARLARYRLLARAARQAGASHVLTAHTRDDQAETVLMRLLRGSGIVG LAAMAPVSARDGLLLARPLLEISKARLVATLRSAGIEFADDPTNHDPAYTRPRLRALMPALAAEGGDSRTLATLAGRLAR ANAAIELMVDGAEKHLALRASRGGSIRPAQGQTFEARAFVALPAEIRLRLLMRAINQIGTEGPVELGKAEALLDRMDRTM DRTLAGVANGGTSAAGRLKQTLAGALVSMTREAIRITPAPPRRPRRS
Sequences:
>Translated_367_residues MAAHETAQANPSDDGRPIGVAEAEVLFASLADAPALVLAVSGGPDSMALLWLAARWRQALADGPRLVAITVDHGLRPEAR REAAMVKRFARQLEVSHRMLRWTEPKPTTGIPEAARLARYRLLARAARQAGASHVLTAHTRDDQAETVLMRLLRGSGIVG LAAMAPVSARDGLLLARPLLEISKARLVATLRSAGIEFADDPTNHDPAYTRPRLRALMPALAAEGGDSRTLATLAGRLAR ANAAIELMVDGAEKHLALRASRGGSIRPAQGQTFEARAFVALPAEIRLRLLMRAINQIGTEGPVELGKAEALLDRMDRTM DRTLAGVANGGTSAAGRLKQTLAGALVSMTREAIRITPAPPRRPRRS >Mature_366_residues AAHETAQANPSDDGRPIGVAEAEVLFASLADAPALVLAVSGGPDSMALLWLAARWRQALADGPRLVAITVDHGLRPEARR EAAMVKRFARQLEVSHRMLRWTEPKPTTGIPEAARLARYRLLARAARQAGASHVLTAHTRDDQAETVLMRLLRGSGIVGL AAMAPVSARDGLLLARPLLEISKARLVATLRSAGIEFADDPTNHDPAYTRPRLRALMPALAAEGGDSRTLATLAGRLARA NAAIELMVDGAEKHLALRASRGGSIRPAQGQTFEARAFVALPAEIRLRLLMRAINQIGTEGPVELGKAEALLDRMDRTMD RTLAGVANGGTSAAGRLKQTLAGALVSMTREAIRITPAPPRRPRRS
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=180, Percent_Identity=37.2222222222222, Blast_Score=89, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3 [H]
EC number: NA
Molecular weight: Translated: 39190; Mature: 39059
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHETAQANPSDDGRPIGVAEAEVLFASLADAPALVLAVSGGPDSMALLWLAARWRQAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH ADGPRLVAITVDHGLRPEARREAAMVKRFARQLEVSHRMLRWTEPKPTTGIPEAARLARY CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RLLARAARQAGASHVLTAHTRDDQAETVLMRLLRGSGIVGLAAMAPVSARDGLLLARPLL HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCHHHHHHH EISKARLVATLRSAGIEFADDPTNHDPAYTRPRLRALMPALAAEGGDSRTLATLAGRLAR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ANAAIELMVDGAEKHLALRASRGGSIRPAQGQTFEARAFVALPAEIRLRLLMRAINQIGT CCCEEEEEECCCHHHEEEEECCCCCCCCCCCCCEECEEEEECCHHHHHHHHHHHHHHHCC EGPVELGKAEALLDRMDRTMDRTLAGVANGGTSAAGRLKQTLAGALVSMTREAIRITPAP CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC PRRPRRS CCCCCCC >Mature Secondary Structure AAHETAQANPSDDGRPIGVAEAEVLFASLADAPALVLAVSGGPDSMALLWLAARWRQAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH ADGPRLVAITVDHGLRPEARREAAMVKRFARQLEVSHRMLRWTEPKPTTGIPEAARLARY CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RLLARAARQAGASHVLTAHTRDDQAETVLMRLLRGSGIVGLAAMAPVSARDGLLLARPLL HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCHHHHHHH EISKARLVATLRSAGIEFADDPTNHDPAYTRPRLRALMPALAAEGGDSRTLATLAGRLAR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ANAAIELMVDGAEKHLALRASRGGSIRPAQGQTFEARAFVALPAEIRLRLLMRAINQIGT CCCEEEEEECCCHHHEEEEECCCCCCCCCCCCCEECEEEEECCHHHHHHHHHHHHHHHCC EGPVELGKAEALLDRMDRTMDRTLAGVANGGTSAAGRLKQTLAGALVSMTREAIRITPAP CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCC PRRPRRS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA