| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cbbG [H]
Identifier: 146338224
GI number: 146338224
Start: 1198670
End: 1199677
Strand: Reverse
Name: cbbG [H]
Synonym: BRADO1124
Alternate gene names: 146338224
Gene position: 1199677-1198670 (Counterclockwise)
Preceding gene: 146338225
Following gene: 146338223
Centisome position: 16.09
GC content: 64.98
Gene sequence:
>1008_bases ATGGCAGTCCGGGTCGGGATCAACGGGTTTGGCCGCATCGGCCGCAACGTGCTGCGCGCCATCGCGGAATCGGGCCGCAA GGACATCGTGGTGGTCGGCATCAACGATCTCGGCCCGGTCGAGACCAATGCCCATCTGCTGCGCTTCGACAGCGTGCACG GCCGCTTTCCGCACACCGTGACGGTCGACGGCGACACCATCGATATCGGCCAGGGCAAGATCAAGGTGACCGCCGAGCGC GATCCGTCGAAGCTGCCGTGGAAGGATCTCGGCGTCGACATCGCGCTGGAATGCACCGGCATCTTCACCTCCAAGGACAA GGCCTCCGCGCATCTCACCGCCGGCGCCAAGCGCGTGCTGGTCTCGGCCCCGGCCGACGGCGCCGACGCCACCATCGTGT ACGGCGTCAATCATGCGACTCTGACCAAGGATCACCTGGTGGTCTCGAACGGCTCGTGCACCACGAACTGCCTGGCGCCT GTCGCCAAGGTGCTGAACGACACGGTCGGCATCGAGACCGGCTTCATGACCACGATCCATGCCTACACCGGCGACCAGCC GACGCTCGACACCATGCACAAGGATCTCTATCGCGGCCGCGCAGCGGCGATGTCGATGATCCCGACCTCGACGGGTGCGG CCAAGGCGATCGGCCTGGTGCTGCCGGAGCTCAAGGGCAAGCTCGACGGCGTCGCGATCCGCGTGCCGACGCCGAACGTC TCGGTGGTCGATCTCAAGATCGTCGCCAAGCGCAACACCGAGCCGAAGGAGATCAACGAGGCGATCAAGCGCGCCGCCGA GCAGGAGCTCAAGGGCGTGCTCGGCTACACCAACGCGCCGAACGTCTCGATCGACTTCAACCACGATCCGCATTCGTCGA CGTTCCACATGGACCAGACCAAGGTCATGAACGGCAACCTCGTGCGCGTGATGTCCTGGTACGACAACGAGTGGGGCTTC TCCAACCGCATGGCCGACACGGCCGTTGCGATGGGCAAGCTGCTTTGA
Upstream 100 bases:
>100_bases CCGCCCGGCAGAACCGGTCGGCATTAGTTCCAAAACCCTCGTGGCGCCCCTGTTAGGAGGACGCAGACGGGGACGAGAAA CGTCATTGAAGGAGACGAAA
Downstream 100 bases:
>100_bases GCCTGTCCCAGTCATTCCGGGGCGATGCGAAGCATCGAACCCGGAATGACGACTGAGGAAGCGCCATGACCCTTCCCAAT TGGCTCGGCATCCCCGGCGT
Product: glyceraldehyde-3-phosphate dehydrogenase
Products: NA
Alternate protein names: GAPDH [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MAVRVGINGFGRIGRNVLRAIAESGRKDIVVVGINDLGPVETNAHLLRFDSVHGRFPHTVTVDGDTIDIGQGKIKVTAER DPSKLPWKDLGVDIALECTGIFTSKDKASAHLTAGAKRVLVSAPADGADATIVYGVNHATLTKDHLVVSNGSCTTNCLAP VAKVLNDTVGIETGFMTTIHAYTGDQPTLDTMHKDLYRGRAAAMSMIPTSTGAAKAIGLVLPELKGKLDGVAIRVPTPNV SVVDLKIVAKRNTEPKEINEAIKRAAEQELKGVLGYTNAPNVSIDFNHDPHSSTFHMDQTKVMNGNLVRVMSWYDNEWGF SNRMADTAVAMGKLL
Sequences:
>Translated_335_residues MAVRVGINGFGRIGRNVLRAIAESGRKDIVVVGINDLGPVETNAHLLRFDSVHGRFPHTVTVDGDTIDIGQGKIKVTAER DPSKLPWKDLGVDIALECTGIFTSKDKASAHLTAGAKRVLVSAPADGADATIVYGVNHATLTKDHLVVSNGSCTTNCLAP VAKVLNDTVGIETGFMTTIHAYTGDQPTLDTMHKDLYRGRAAAMSMIPTSTGAAKAIGLVLPELKGKLDGVAIRVPTPNV SVVDLKIVAKRNTEPKEINEAIKRAAEQELKGVLGYTNAPNVSIDFNHDPHSSTFHMDQTKVMNGNLVRVMSWYDNEWGF SNRMADTAVAMGKLL >Mature_334_residues AVRVGINGFGRIGRNVLRAIAESGRKDIVVVGINDLGPVETNAHLLRFDSVHGRFPHTVTVDGDTIDIGQGKIKVTAERD PSKLPWKDLGVDIALECTGIFTSKDKASAHLTAGAKRVLVSAPADGADATIVYGVNHATLTKDHLVVSNGSCTTNCLAPV AKVLNDTVGIETGFMTTIHAYTGDQPTLDTMHKDLYRGRAAAMSMIPTSTGAAKAIGLVLPELKGKLDGVAIRVPTPNVS VVDLKIVAKRNTEPKEINEAIKRAAEQELKGVLGYTNAPNVSIDFNHDPHSSTFHMDQTKVMNGNLVRVMSWYDNEWGFS NRMADTAVAMGKLL
Specific function: Could Play A Role In Pyridoxal 5'-Phosphate Synthesis. [C]
COG id: COG0057
COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI7669492, Length=332, Percent_Identity=49.3975903614458, Blast_Score=306, Evalue=2e-83, Organism=Homo sapiens, GI7657116, Length=326, Percent_Identity=45.7055214723926, Blast_Score=275, Evalue=6e-74, Organism=Escherichia coli, GI1789295, Length=336, Percent_Identity=47.6190476190476, Blast_Score=341, Evalue=5e-95, Organism=Escherichia coli, GI1788079, Length=327, Percent_Identity=50.4587155963303, Blast_Score=316, Evalue=2e-87, Organism=Caenorhabditis elegans, GI17534677, Length=332, Percent_Identity=50.3012048192771, Blast_Score=306, Evalue=9e-84, Organism=Caenorhabditis elegans, GI17534679, Length=332, Percent_Identity=50, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI32566163, Length=332, Percent_Identity=49.0963855421687, Blast_Score=292, Evalue=1e-79, Organism=Caenorhabditis elegans, GI17568413, Length=332, Percent_Identity=49.0963855421687, Blast_Score=292, Evalue=2e-79, Organism=Saccharomyces cerevisiae, GI6322409, Length=328, Percent_Identity=50, Blast_Score=310, Evalue=2e-85, Organism=Saccharomyces cerevisiae, GI6321631, Length=328, Percent_Identity=50.9146341463415, Blast_Score=304, Evalue=2e-83, Organism=Saccharomyces cerevisiae, GI6322468, Length=328, Percent_Identity=49.6951219512195, Blast_Score=303, Evalue=2e-83, Organism=Drosophila melanogaster, GI17933600, Length=326, Percent_Identity=50.3067484662577, Blast_Score=300, Evalue=7e-82, Organism=Drosophila melanogaster, GI18110149, Length=326, Percent_Identity=50.3067484662577, Blast_Score=300, Evalue=7e-82, Organism=Drosophila melanogaster, GI85725000, Length=326, Percent_Identity=49.6932515337423, Blast_Score=300, Evalue=1e-81, Organism=Drosophila melanogaster, GI22023983, Length=326, Percent_Identity=49.6932515337423, Blast_Score=300, Evalue=1e-81, Organism=Drosophila melanogaster, GI19922412, Length=326, Percent_Identity=46.0122699386503, Blast_Score=279, Evalue=2e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020831 - InterPro: IPR020830 - InterPro: IPR020829 - InterPro: IPR020828 - InterPro: IPR006424 - InterPro: IPR016040 [H]
Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N [H]
EC number: =1.2.1.12 [H]
Molecular weight: Translated: 35872; Mature: 35741
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRVGINGFGRIGRNVLRAIAESGRKDIVVVGINDLGPVETNAHLLRFDSVHGRFPHTV CEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEE TVDGDTIDIGQGKIKVTAERDPSKLPWKDLGVDIALECTGIFTSKDKASAHLTAGAKRVL EECCCEEEECCCEEEEEECCCCCCCCHHHCCEEEEEEEEEEEECCCCCCEEEECCCEEEE VSAPADGADATIVYGVNHATLTKDHLVVSNGSCTTNCLAPVAKVLNDTVGIETGFMTTIH EECCCCCCCEEEEEECCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE AYTGDQPTLDTMHKDLYRGRAAAMSMIPTSTGAAKAIGLVLPELKGKLDGVAIRVPTPNV EECCCCCCHHHHHHHHHHCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC SVVDLKIVAKRNTEPKEINEAIKRAAEQELKGVLGYTNAPNVSIDFNHDPHSSTFHMDQT EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCE KVMNGNLVRVMSWYDNEWGFSNRMADTAVAMGKLL EEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure AVRVGINGFGRIGRNVLRAIAESGRKDIVVVGINDLGPVETNAHLLRFDSVHGRFPHTV EEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEE TVDGDTIDIGQGKIKVTAERDPSKLPWKDLGVDIALECTGIFTSKDKASAHLTAGAKRVL EECCCEEEECCCEEEEEECCCCCCCCHHHCCEEEEEEEEEEEECCCCCCEEEECCCEEEE VSAPADGADATIVYGVNHATLTKDHLVVSNGSCTTNCLAPVAKVLNDTVGIETGFMTTIH EECCCCCCCEEEEEECCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE AYTGDQPTLDTMHKDLYRGRAAAMSMIPTSTGAAKAIGLVLPELKGKLDGVAIRVPTPNV EECCCCCCHHHHHHHHHHCHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC SVVDLKIVAKRNTEPKEINEAIKRAAEQELKGVLGYTNAPNVSIDFNHDPHSSTFHMDQT EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCCE KVMNGNLVRVMSWYDNEWGFSNRMADTAVAMGKLL EEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7928974 [H]