| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cysW [H]
Identifier: 146338174
GI number: 146338174
Start: 1139470
End: 1140372
Strand: Direct
Name: cysW [H]
Synonym: BRADO1072
Alternate gene names: 146338174
Gene position: 1139470-1140372 (Clockwise)
Preceding gene: 146338173
Following gene: 146338175
Centisome position: 15.28
GC content: 64.45
Gene sequence:
>903_bases ATGAGCATCGAGATGACCCTGCAACGGACGCCGGATGCCTCGGCGCGCAGCCTGGCCGAAAGCGCCGCCCGACGCGATCC GCGCGCCGAGCCGACCGTCGTTCGGCTGGCGATCATCACGCTCGCGATCGCCTTCCTGTCCATCTTTGTCGTGCTGCCGC TGGTCGTCGTCTTCGTCGAGGCGTTCGGCAAGGGTGTCGTGGCCTATTTTTCAGCTCTGGCCGACCCCGAGGCCTGGTCC GCCATTCGTCTCACGCTGGGTGTCGCGGCGGTGTCCGTGGGCACCAACCTGCTGTTCGGCTTGGCCGCCGCCTGGGCGAT CGCGAAGTTCGACTTCCCCGGCAAGACCTTCCTGATCACGCTGATCGACCTGCCGTTCTCGGTCAGCCCGGTGATCTCGG GTCTGGTGTTCGTGCTGCTGTTCGGTGCGCAGGGCTTCTTCGGACCCTGGCTGCAGGCGCACGGTCTACAGATCCTGTTC GCCTTCCCGGGCATCGCGCTCGCCACCATCTTCGTTACGTTTCCCTTCGTCGCGCGCGCGCTGATTCCGCTGATGCAGGA GCAGGGCACGCAGGAAGAGGAGGCGGCGATCTCGCTTGGCGCCTCGGGGCTGCAGACCTTCTTCCGCGTCACGCTGCCCA ACATCAAATGGGGCGTGCTGTACGGCGTCCTGCTGTGCAATGCGCGGGCGATGGGTGAGTTCGGCGCGGTGTCGGTGGTG TCGGGTCATGTCCGCGGCGAGACCAACACGATGCCGCTGCTGGTCGAGATTCTCTACAACGAGTACCAGATGGTGGCCTC GTTCGCGATTGCCTCGCTGCTCGCGATGCTGGCGCTGATCACGCTGATTGCCAAGACCATTCTCGAACGTAACATCGACG AGGACATGCCTCATGACCATTGA
Upstream 100 bases:
>100_bases CATTGCAGTGGTGATGCTTGTGGTGGCATTCGTGATCATCTTCGCGGTGAATCGCCTGCAGCGCTGGGCTCAGACCCAGG CGTCCACCTGAGGCCGCGAC
Downstream 100 bases:
>100_bases AGCGAGAGGCGTCGTCAAGACCTTCGGGACCTTCAAGGCGCTCGACGGCGTCGACCTCAAGGTCGCCAATGGCGAGCTGC TGGCGCTGCTCGGGCCGTCC
Product: sulfate/thiosulfate permease W
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSIEMTLQRTPDASARSLAESAARRDPRAEPTVVRLAIITLAIAFLSIFVVLPLVVVFVEAFGKGVVAYFSALADPEAWS AIRLTLGVAAVSVGTNLLFGLAAAWAIAKFDFPGKTFLITLIDLPFSVSPVISGLVFVLLFGAQGFFGPWLQAHGLQILF AFPGIALATIFVTFPFVARALIPLMQEQGTQEEEAAISLGASGLQTFFRVTLPNIKWGVLYGVLLCNARAMGEFGAVSVV SGHVRGETNTMPLLVEILYNEYQMVASFAIASLLAMLALITLIAKTILERNIDEDMPHDH
Sequences:
>Translated_300_residues MSIEMTLQRTPDASARSLAESAARRDPRAEPTVVRLAIITLAIAFLSIFVVLPLVVVFVEAFGKGVVAYFSALADPEAWS AIRLTLGVAAVSVGTNLLFGLAAAWAIAKFDFPGKTFLITLIDLPFSVSPVISGLVFVLLFGAQGFFGPWLQAHGLQILF AFPGIALATIFVTFPFVARALIPLMQEQGTQEEEAAISLGASGLQTFFRVTLPNIKWGVLYGVLLCNARAMGEFGAVSVV SGHVRGETNTMPLLVEILYNEYQMVASFAIASLLAMLALITLIAKTILERNIDEDMPHDH >Mature_299_residues SIEMTLQRTPDASARSLAESAARRDPRAEPTVVRLAIITLAIAFLSIFVVLPLVVVFVEAFGKGVVAYFSALADPEAWSA IRLTLGVAAVSVGTNLLFGLAAAWAIAKFDFPGKTFLITLIDLPFSVSPVISGLVFVLLFGAQGFFGPWLQAHGLQILFA FPGIALATIFVTFPFVARALIPLMQEQGTQEEEAAISLGASGLQTFFRVTLPNIKWGVLYGVLLCNARAMGEFGAVSVVS GHVRGETNTMPLLVEILYNEYQMVASFAIASLLAMLALITLIAKTILERNIDEDMPHDH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=264, Percent_Identity=51.5151515151515, Blast_Score=281, Evalue=5e-77, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=36.4077669902913, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1786980, Length=227, Percent_Identity=33.4801762114537, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787369, Length=178, Percent_Identity=25.8426966292135, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32272; Mature: 32141
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEMTLQRTPDASARSLAESAARRDPRAEPTVVRLAIITLAIAFLSIFVVLPLVVVFVE CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGKGVVAYFSALADPEAWSAIRLTLGVAAVSVGTNLLFGLAAAWAIAKFDFPGKTFLIT HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LIDLPFSVSPVISGLVFVLLFGAQGFFGPWLQAHGLQILFAFPGIALATIFVTFPFVARA EECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH LIPLMQEQGTQEEEAAISLGASGLQTFFRVTLPNIKWGVLYGVLLCNARAMGEFGAVSVV HHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCHHHH SGHVRGETNTMPLLVEILYNEYQMVASFAIASLLAMLALITLIAKTILERNIDEDMPHDH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIEMTLQRTPDASARSLAESAARRDPRAEPTVVRLAIITLAIAFLSIFVVLPLVVVFVE CEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGKGVVAYFSALADPEAWSAIRLTLGVAAVSVGTNLLFGLAAAWAIAKFDFPGKTFLIT HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LIDLPFSVSPVISGLVFVLLFGAQGFFGPWLQAHGLQILFAFPGIALATIFVTFPFVARA EECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHH LIPLMQEQGTQEEEAAISLGASGLQTFFRVTLPNIKWGVLYGVLLCNARAMGEFGAVSVV HHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCHHHH SGHVRGETNTMPLLVEILYNEYQMVASFAIASLLAMLALITLIAKTILERNIDEDMPHDH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]