Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yvbT [H]

Identifier: 146338100

GI number: 146338100

Start: 1061636

End: 1062574

Strand: Direct

Name: yvbT [H]

Synonym: BRADO0996

Alternate gene names: 146338100

Gene position: 1061636-1062574 (Clockwise)

Preceding gene: 146338094

Following gene: 146338102

Centisome position: 14.24

GC content: 67.73

Gene sequence:

>939_bases
TTGGCGCGCCACGTCGATCAGCTCGGTTATGTCCGCTACTGGCTCGCCGAGCATCACAGCCTTGTTTCGGTGGCGAGCCC
GTCGCCTGACATCATGATCGGGCAGATCGCGGCCGTCACAAAACGCATCCGCGTCGGCTCCGGCGGCGTGATGCTGCCCA
ACCATGCGCCACTGGTGGTCGCCGAACGCTTCAAGATGCTGGAGGCGCTTTTTCCGGGCCGGATCGACCTCGGCCTGGGC
CGCGCGCCCGGCACCGACGGCACCACGGCCTATGCGCTGAGGAGCCGGCTCGACCGCCGTGACGGCGACGATTTCCTGGA
GCGGCTGCATGAGCTGACCCTTTGGCAGACGCGGGAGTTCCCCGCGGGCCATCCCTACAACAACGTCATCGCGATGCCCG
ACGATGCGCCGCTGCCGCCGATCTTTCTGCTCGGCTCCAGCGACTATTCCAGCGAGCTCTCGGCGCAGATGGGCATGGGG
TTTGGCTTCGCGCATCATTTCGCCAATCACGACGCGATCGACGCGATGACCAATTATCGCGCACATTTCACCGCCTCGCG
CTGGCGCTCGCAGCCGCATGCGATCCTGGCGGTCGCCGTGGTGACGGCCGAGACCGATGCGGAAGCCGAGCGGCTGGCGT
CGTCGATGGACCTCAATCGTCTCCGGCGCGACCGCGGCCAGTTCCTGCCGCTGCCGAGCCCGGAGGAGGCGGCGGCCTAT
CCGTATACGGACTCCGACCGCGCCTCGATCGCCCGCAACCGCTCAAGACTGTTCGTCGGCTCGCCCGCGACGGTTCGCGC
CAAGCTCGACCCGATGATCGCGGCGAGCCAGGCCGACGAGCTGATGGTGATCACCGCGATCTTCGACCACGAGGCCCGCA
AGCGCTCCTACACCCTGCTCGCCGACGCCTTCGGCCTGGAGCGGCAGGCGGCGGCGTAA

Upstream 100 bases:

>100_bases
CAGCCATTACGTTGAGACTATGATCCCGATTTCAGTCCTCGACCTCTCCGTCACAACCACGGCCACGCCGGCCTCGGCGG
CGTTGCGCAACAGCATAGAT

Downstream 100 bases:

>100_bases
CGGGAGTCCTCGACAGACCTCGATCGGACTTGGGAGCGGCAGAGCAGGATCATCTCCCCGCGATCTCGATTGAGGATCCG
AGTTTGCGCTCGTCGTTCTC

Product: putative monooxygenase with luciferase-like ATPase activity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVVAERFKMLEALFPGRIDLGLG
RAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREFPAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMG
FGFAHHFANHDAIDAMTNYRAHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY
PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLLADAFGLERQAAA

Sequences:

>Translated_312_residues
MARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVVAERFKMLEALFPGRIDLGLG
RAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREFPAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMG
FGFAHHFANHDAIDAMTNYRAHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY
PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLLADAFGLERQAAA
>Mature_311_residues
ARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVVAERFKMLEALFPGRIDLGLGR
APGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREFPAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMGF
GFAHHFANHDAIDAMTNYRAHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAYP
YTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLLADAFGLERQAAA

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=302, Percent_Identity=41.0596026490066, Blast_Score=222, Evalue=3e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 34406; Mature: 34275

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVV
CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEHHHHHHHHHHEECCCCEECCCCCCHHH
AERFKMLEALFPGRIDLGLGRAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREF
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
PAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMGFGFAHHFANHDAIDAMTNYR
CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
AHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY
HEEEHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLL
CCCCCHHHHHHHCCCEEEECCCCEEEEECCCCEECCCCCCEEEEEEECCCHHHHHHEEEE
ADAFGLERQAAA
HHHHCCCHHCCC
>Mature Secondary Structure 
ARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVV
CCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEHHHHHHHHHHEECCCCEECCCCCCHHH
AERFKMLEALFPGRIDLGLGRAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREF
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
PAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMGFGFAHHFANHDAIDAMTNYR
CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH
AHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY
HEEEHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLL
CCCCCHHHHHHHCCCEEEECCCCEEEEECCCCEECCCCCCEEEEEEECCCHHHHHHEEEE
ADAFGLERQAAA
HHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]